Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC8.51□□□□□ -1.05
Chd1P40201 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC8.51□□□□□ -1.05
Chd1P40201 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC8.51□□□□□ -1.05
Chd1P40201 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Chd1P40201 Pgbd1-202ENSMUST00000122872 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Chd1P40201 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Chd1P40201 Olfr77-202ENSMUST00000217347 5980 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Chd1P40201 Rapgef6-210ENSMUST00000207429 5164 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Chd1P40201 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Chd1P40201 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Chd1P40201 Tenm4-202ENSMUST00000107165 10930 ntAPPRIS P4 TSL 1 (best) BASIC8.5□□□□□ -1.05
Chd1P40201 Olfr829-202ENSMUST00000212229 2590 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
Chd1P40201 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Chd1P40201 Zfp831-201ENSMUST00000059452 9807 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Chd1P40201 Gm23274-201ENSMUST00000104056 130 ntBASIC8.5□□□□□ -1.05
Chd1P40201 Gm13149-201ENSMUST00000122071 339 ntBASIC8.5□□□□□ -1.05
Chd1P40201 Pantr1-203ENSMUST00000176154 514 ntTSL 5 BASIC8.5□□□□□ -1.05
Chd1P40201 AC139350.2-201ENSMUST00000226508 2331 ntBASIC8.5□□□□□ -1.05
Chd1P40201 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Chd1P40201 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Chd1P40201 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC8.5□□□□□ -1.05
Chd1P40201 AC163731.1-201ENSMUST00000225696 3118 ntBASIC8.5□□□□□ -1.05
Chd1P40201 Gm43175-201ENSMUST00000198450 3810 ntBASIC8.5□□□□□ -1.05
Chd1P40201 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Chd1P40201 Sema6a-201ENSMUST00000019791 6856 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Chd1P40201 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Chd1P40201 Gm37760-201ENSMUST00000194726 3841 ntBASIC8.5□□□□□ -1.05
Chd1P40201 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Chd1P40201 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
Chd1P40201 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Chd1P40201 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Chd1P40201 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Chd1P40201 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Chd1P40201 Gm14382-201ENSMUST00000117374 437 ntBASIC8.49□□□□□ -1.05
Chd1P40201 Gm11633-201ENSMUST00000118176 444 ntBASIC8.49□□□□□ -1.05
Chd1P40201 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC8.49□□□□□ -1.05
Chd1P40201 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Chd1P40201 Gm23872-201ENSMUST00000175432 77 ntBASIC8.49□□□□□ -1.05
Chd1P40201 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC8.49□□□□□ -1.05
Chd1P40201 Gm5511-201ENSMUST00000189380 802 ntBASIC8.49□□□□□ -1.05
Chd1P40201 Ighv3-2-201ENSMUST00000191842 349 ntBASIC8.49□□□□□ -1.05
Chd1P40201 Gm2622-201ENSMUST00000200018 471 ntBASIC8.49□□□□□ -1.05
Chd1P40201 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Chd1P40201 AC102291.1-201ENSMUST00000227164 529 ntBASIC8.49□□□□□ -1.05
Chd1P40201 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC8.49□□□□□ -1.05
Chd1P40201 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC8.49□□□□□ -1.05
Chd1P40201 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
Chd1P40201 Eya3-203ENSMUST00000081726 5160 ntAPPRIS P4 TSL 1 (best) BASIC8.49□□□□□ -1.05
Chd1P40201 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC8.49□□□□□ -1.05
Chd1P40201 Myo1e-201ENSMUST00000034745 4625 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Chd1P40201 Ltn1-201ENSMUST00000039449 7737 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Chd1P40201 Stra6l-203ENSMUST00000107783 3669 ntAPPRIS P3 TSL 5 BASIC8.49□□□□□ -1.05
Chd1P40201 Gm37485-201ENSMUST00000192326 2953 ntBASIC8.49□□□□□ -1.05
Chd1P40201 Gm37040-201ENSMUST00000191740 1824 ntBASIC8.49□□□□□ -1.05
Chd1P40201 Plxna2-201ENSMUST00000027952 11040 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Chd1P40201 Zfp827-202ENSMUST00000098614 7581 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
Chd1P40201 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Chd1P40201 A630009H07Rik-201ENSMUST00000208485 2159 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Chd1P40201 Tiam1-213ENSMUST00000163370 7255 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Chd1P40201 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Chd1P40201 Lingo2-201ENSMUST00000065173 2910 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Chd1P40201 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Chd1P40201 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC8.49□□□□□ -1.05
Chd1P40201 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC8.49□□□□□ -1.05
Chd1P40201 Gm23839-201ENSMUST00000116957 109 ntBASIC8.49□□□□□ -1.05
Chd1P40201 Gm6062-201ENSMUST00000120462 631 ntBASIC8.49□□□□□ -1.05
Chd1P40201 Gm5405-201ENSMUST00000120478 609 ntBASIC8.49□□□□□ -1.05
Chd1P40201 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Chd1P40201 Gm3362-201ENSMUST00000148102 466 ntBASIC8.49□□□□□ -1.05
Chd1P40201 Gm8221-201ENSMUST00000178052 564 ntBASIC8.49□□□□□ -1.05
Chd1P40201 Gm38046-201ENSMUST00000192733 550 ntBASIC8.49□□□□□ -1.05
Chd1P40201 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC8.49□□□□□ -1.05
Chd1P40201 Gm37908-201ENSMUST00000195828 470 ntBASIC8.49□□□□□ -1.05
Chd1P40201 Gm8264-201ENSMUST00000217801 465 ntBASIC8.49□□□□□ -1.05
Chd1P40201 Gm8158-201ENSMUST00000219220 465 ntBASIC8.49□□□□□ -1.05
Chd1P40201 Gm8112-201ENSMUST00000219637 465 ntBASIC8.49□□□□□ -1.05
Chd1P40201 Asxl2-202ENSMUST00000111215 8887 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Chd1P40201 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC8.48□□□□□ -1.05
Chd1P40201 C030015A19Rik-201ENSMUST00000203368 2551 ntBASIC8.48□□□□□ -1.05
Chd1P40201 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Chd1P40201 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Chd1P40201 Gm39041-201ENSMUST00000205557 3902 ntBASIC8.48□□□□□ -1.05
Chd1P40201 Fgf10-201ENSMUST00000022246 4114 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Chd1P40201 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Chd1P40201 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Chd1P40201 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Chd1P40201 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Chd1P40201 Gm23193-201ENSMUST00000102427 82 ntBASIC8.48□□□□□ -1.05
Chd1P40201 Gm12144-201ENSMUST00000136288 1292 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Chd1P40201 AC153961.1-201ENSMUST00000217760 385 ntBASIC8.48□□□□□ -1.05
Chd1P40201 Fam126b-202ENSMUST00000097724 4581 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Chd1P40201 Gm38043-201ENSMUST00000195501 5141 ntBASIC8.48□□□□□ -1.05
Chd1P40201 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
Chd1P40201 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC8.47□□□□□ -1.05
Chd1P40201 Sc5d-201ENSMUST00000052725 4787 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Chd1P40201 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
Chd1P40201 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC8.47□□□□□ -1.05
Chd1P40201 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Chd1P40201 Zfp521-201ENSMUST00000025288 6152 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Chd1P40201 Ncor1-204ENSMUST00000101066 8852 ntAPPRIS P2 TSL 5 BASIC8.47□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms