Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm15316-201ENSMUST00000121082 421 ntBASIC4.59□□□□□ -1.67
Sdc1P18828 Gm7599-201ENSMUST00000121453 796 ntBASIC4.59□□□□□ -1.67
Sdc1P18828 Gm4886-201ENSMUST00000121874 1176 ntBASIC4.59□□□□□ -1.67
Sdc1P18828 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC4.59□□□□□ -1.67
Sdc1P18828 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Sdc1P18828 Gm15932-201ENSMUST00000135068 535 ntTSL 5 BASIC4.59□□□□□ -1.67
Sdc1P18828 Gm26106-201ENSMUST00000157254 228 ntBASIC4.59□□□□□ -1.67
Sdc1P18828 Gm23674-201ENSMUST00000157473 131 ntBASIC4.59□□□□□ -1.67
Sdc1P18828 Gm25770-201ENSMUST00000158566 115 ntBASIC4.59□□□□□ -1.67
Sdc1P18828 Gm17024-201ENSMUST00000165676 634 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Sdc1P18828 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC4.59□□□□□ -1.67
Sdc1P18828 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Sdc1P18828 Mir1231-201ENSMUST00000175639 81 ntBASIC4.59□□□□□ -1.67
Sdc1P18828 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC4.59□□□□□ -1.67
Sdc1P18828 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC4.59□□□□□ -1.67
Sdc1P18828 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC4.59□□□□□ -1.67
Sdc1P18828 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC4.59□□□□□ -1.67
Sdc1P18828 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC4.59□□□□□ -1.67
Sdc1P18828 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC4.59□□□□□ -1.67
Sdc1P18828 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC4.59□□□□□ -1.67
Sdc1P18828 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC4.59□□□□□ -1.67
Sdc1P18828 Gm18709-201ENSMUST00000180564 489 ntBASIC4.59□□□□□ -1.67
Sdc1P18828 Rps12l1-201ENSMUST00000183090 399 ntBASIC4.59□□□□□ -1.67
Sdc1P18828 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Sdc1P18828 Gm21761-202ENSMUST00000187530 1374 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Sdc1P18828 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC4.59□□□□□ -1.67
Sdc1P18828 Gm36945-201ENSMUST00000192040 864 ntTSL 3 BASIC4.59□□□□□ -1.67
Sdc1P18828 Gm26413-201ENSMUST00000196783 126 ntBASIC4.59□□□□□ -1.67
Sdc1P18828 Gm42886-201ENSMUST00000199214 466 ntBASIC4.59□□□□□ -1.67
Sdc1P18828 Gm18290-201ENSMUST00000202900 844 ntBASIC4.59□□□□□ -1.67
Sdc1P18828 Gm44777-202ENSMUST00000206492 1889 ntTSL 5 BASIC4.59□□□□□ -1.67
Sdc1P18828 Gm18805-201ENSMUST00000206872 655 ntBASIC4.59□□□□□ -1.67
Sdc1P18828 Gm44829-201ENSMUST00000208008 3193 ntBASIC4.59□□□□□ -1.67
Sdc1P18828 Gm4270-201ENSMUST00000209666 406 ntBASIC4.59□□□□□ -1.67
Sdc1P18828 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC4.59□□□□□ -1.67
Sdc1P18828 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Sdc1P18828 CT030124.1-201ENSMUST00000217130 235 ntBASIC4.59□□□□□ -1.67
Sdc1P18828 CT025625.1-201ENSMUST00000217786 460 ntTSL 5 BASIC4.59□□□□□ -1.67
Sdc1P18828 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC4.59□□□□□ -1.67
Sdc1P18828 Gm7550-201ENSMUST00000223334 282 ntTSL 5 BASIC4.59□□□□□ -1.67
Sdc1P18828 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Sdc1P18828 AC140267.1-201ENSMUST00000226485 213 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Sdc1P18828 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Sdc1P18828 AC159979.1-201ENSMUST00000227927 342 ntBASIC4.59□□□□□ -1.67
Sdc1P18828 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
Sdc1P18828 Kcne3-201ENSMUST00000049333 1012 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Sdc1P18828 Olfr1431-201ENSMUST00000072316 939 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Sdc1P18828 Olfr1505-201ENSMUST00000081520 1103 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Sdc1P18828 Mir365-2-201ENSMUST00000083555 112 ntBASIC4.59□□□□□ -1.67
Sdc1P18828 Gm10205-201ENSMUST00000087431 234 ntBASIC4.59□□□□□ -1.67
Sdc1P18828 Olfr501-ps1-201ENSMUST00000094105 946 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Sdc1P18828 Olfr111-201ENSMUST00000097325 1041 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Sdc1P18828 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC4.59□□□□□ -1.68
Sdc1P18828 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.68
Sdc1P18828 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
Sdc1P18828 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.68
Sdc1P18828 Gm16270-201ENSMUST00000160327 3238 ntBASIC4.59□□□□□ -1.68
Sdc1P18828 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
Sdc1P18828 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
Sdc1P18828 Gm43426-201ENSMUST00000197287 2597 ntBASIC4.59□□□□□ -1.68
Sdc1P18828 Sult1d1-201ENSMUST00000113314 2420 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Sdc1P18828 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
Sdc1P18828 Gm43175-201ENSMUST00000198450 3810 ntBASIC4.58□□□□□ -1.68
Sdc1P18828 Gm12388-201ENSMUST00000119112 1887 ntBASIC4.58□□□□□ -1.68
Sdc1P18828 Gm42873-201ENSMUST00000196110 1726 ntBASIC4.58□□□□□ -1.68
Sdc1P18828 Gm32592-201ENSMUST00000205146 3124 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Sdc1P18828 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Sdc1P18828 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Sdc1P18828 Gm26289-201ENSMUST00000104169 131 ntBASIC4.58□□□□□ -1.68
Sdc1P18828 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC4.58□□□□□ -1.68
Sdc1P18828 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Sdc1P18828 Gm5166-201ENSMUST00000121332 573 ntBASIC4.58□□□□□ -1.68
Sdc1P18828 Gm12396-201ENSMUST00000121600 306 ntBASIC4.58□□□□□ -1.68
Sdc1P18828 Gm14503-201ENSMUST00000130337 1164 ntBASIC4.58□□□□□ -1.68
Sdc1P18828 Olfr75-ps1-201ENSMUST00000135477 938 ntBASIC4.58□□□□□ -1.68
Sdc1P18828 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Sdc1P18828 Skint8-205ENSMUST00000165046 1280 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Sdc1P18828 Gm20545-201ENSMUST00000174739 210 ntBASIC4.58□□□□□ -1.68
Sdc1P18828 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Sdc1P18828 Gm18177-201ENSMUST00000188373 404 ntBASIC4.58□□□□□ -1.68
Sdc1P18828 Gm8419-201ENSMUST00000189886 412 ntBASIC4.58□□□□□ -1.68
Sdc1P18828 1700084F23Rik-205ENSMUST00000191362 743 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Sdc1P18828 Gm18865-201ENSMUST00000193011 1171 ntBASIC4.58□□□□□ -1.68
Sdc1P18828 Gm37444-201ENSMUST00000193605 439 ntBASIC4.58□□□□□ -1.68
Sdc1P18828 Gm43033-201ENSMUST00000199682 425 ntBASIC4.58□□□□□ -1.68
Sdc1P18828 Gm19764-201ENSMUST00000203630 649 ntBASIC4.58□□□□□ -1.68
Sdc1P18828 Pttg1-202ENSMUST00000020687 741 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Sdc1P18828 Olfr712-ps1-201ENSMUST00000207690 950 ntBASIC4.58□□□□□ -1.68
Sdc1P18828 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Sdc1P18828 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC4.58□□□□□ -1.68
Sdc1P18828 Gm8523-201ENSMUST00000211386 552 ntBASIC4.58□□□□□ -1.68
Sdc1P18828 Gm7769-201ENSMUST00000212900 933 ntBASIC4.58□□□□□ -1.68
Sdc1P18828 AC161586.1-201ENSMUST00000223232 547 ntBASIC4.58□□□□□ -1.68
Sdc1P18828 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Sdc1P18828 Gm25189-201ENSMUST00000083911 164 ntBASIC4.58□□□□□ -1.68
Sdc1P18828 Vmn1r43-201ENSMUST00000089418 1069 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Sdc1P18828 Olfr1265-202ENSMUST00000214855 5701 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Sdc1P18828 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Sdc1P18828 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Sdc1P18828 Gm43313-201ENSMUST00000201398 2235 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms