Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Lire1P11260 Gm37973-201ENSMUST00000195767 1289 ntBASIC5.85□□□□□ -1.47
Lire1P11260 Igkv4-73-201ENSMUST00000199760 358 ntBASIC5.85□□□□□ -1.47
Lire1P11260 Gm2040-201ENSMUST00000202979 289 ntBASIC5.85□□□□□ -1.47
Lire1P11260 Gm44770-201ENSMUST00000205395 1264 ntBASIC5.85□□□□□ -1.47
Lire1P11260 Gm44970-201ENSMUST00000206318 314 ntTSL 3 BASIC5.85□□□□□ -1.47
Lire1P11260 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC5.85□□□□□ -1.47
Lire1P11260 CT030195.1-201ENSMUST00000223887 378 ntBASIC5.85□□□□□ -1.47
Lire1P11260 AC131029.2-201ENSMUST00000226696 628 ntBASIC5.85□□□□□ -1.47
Lire1P11260 AC136376.1-201ENSMUST00000228496 950 ntBASIC5.85□□□□□ -1.47
Lire1P11260 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Lire1P11260 Olfr687-201ENSMUST00000098154 938 ntBASIC5.85□□□□□ -1.47
Lire1P11260 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Lire1P11260 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Lire1P11260 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Lire1P11260 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC5.85□□□□□ -1.47
Lire1P11260 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC5.85□□□□□ -1.47
Lire1P11260 Olfr1340-203ENSMUST00000216242 3341 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
Lire1P11260 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Lire1P11260 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Lire1P11260 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Lire1P11260 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Lire1P11260 D830032E09Rik-202ENSMUST00000189497 1632 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Lire1P11260 Olfr57-202ENSMUST00000203906 1647 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Lire1P11260 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Lire1P11260 Gm18879-201ENSMUST00000221187 1537 ntBASIC5.84□□□□□ -1.47
Lire1P11260 Gm37760-201ENSMUST00000194726 3841 ntBASIC5.84□□□□□ -1.47
Lire1P11260 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Lire1P11260 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
Lire1P11260 4930435E12Rik-201ENSMUST00000122078 1368 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Lire1P11260 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Lire1P11260 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC5.84□□□□□ -1.47
Lire1P11260 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Lire1P11260 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Lire1P11260 Gm11799-201ENSMUST00000116110 460 ntBASIC5.84□□□□□ -1.47
Lire1P11260 Gm14885-201ENSMUST00000117969 496 ntBASIC5.84□□□□□ -1.47
Lire1P11260 Gm12244-201ENSMUST00000119500 291 ntBASIC5.84□□□□□ -1.47
Lire1P11260 Gm11325-201ENSMUST00000119967 469 ntBASIC5.84□□□□□ -1.47
Lire1P11260 Gm15780-201ENSMUST00000121283 935 ntBASIC5.84□□□□□ -1.47
Lire1P11260 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC5.84□□□□□ -1.47
Lire1P11260 Gm25219-201ENSMUST00000157545 330 ntBASIC5.84□□□□□ -1.47
Lire1P11260 Gm24687-201ENSMUST00000157758 241 ntBASIC5.84□□□□□ -1.47
Lire1P11260 Gm25550-201ENSMUST00000158079 128 ntBASIC5.84□□□□□ -1.47
Lire1P11260 Gm3091-201ENSMUST00000163408 484 ntBASIC5.84□□□□□ -1.47
Lire1P11260 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Lire1P11260 4933433F19Rik-201ENSMUST00000180571 1088 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Lire1P11260 Mir7222-201ENSMUST00000183740 75 ntBASIC5.84□□□□□ -1.47
Lire1P11260 Gm27210-201ENSMUST00000184263 402 ntBASIC5.84□□□□□ -1.47
Lire1P11260 Gm37135-201ENSMUST00000192652 534 ntBASIC5.84□□□□□ -1.47
Lire1P11260 Gm37809-201ENSMUST00000195050 931 ntBASIC5.84□□□□□ -1.47
Lire1P11260 Gm35013-201ENSMUST00000197218 832 ntBASIC5.84□□□□□ -1.47
Lire1P11260 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
Lire1P11260 Gm5324-201ENSMUST00000208115 476 ntBASIC5.84□□□□□ -1.47
Lire1P11260 Gm18851-201ENSMUST00000210087 1058 ntBASIC5.84□□□□□ -1.47
Lire1P11260 Olfr852-ps1-201ENSMUST00000212273 226 ntBASIC5.84□□□□□ -1.47
Lire1P11260 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
Lire1P11260 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Lire1P11260 AC153505.2-201ENSMUST00000217741 277 ntBASIC5.84□□□□□ -1.47
Lire1P11260 AC154219.1-201ENSMUST00000220764 1262 ntBASIC5.84□□□□□ -1.47
Lire1P11260 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC5.84□□□□□ -1.47
Lire1P11260 4933411G06Rik-201ENSMUST00000075909 1022 ntBASIC5.84□□□□□ -1.47
Lire1P11260 Gm21731-201ENSMUST00000079524 489 ntBASIC5.84□□□□□ -1.47
Lire1P11260 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
Lire1P11260 Gm37781-201ENSMUST00000194773 3218 ntBASIC5.84□□□□□ -1.47
Lire1P11260 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC5.84□□□□□ -1.47
Lire1P11260 Olfr799-203ENSMUST00000214182 1694 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Lire1P11260 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.48
Lire1P11260 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
Lire1P11260 Enox2-209ENSMUST00000167659 3632 ntTSL 5 BASIC5.84□□□□□ -1.48
Lire1P11260 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Lire1P11260 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Lire1P11260 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Lire1P11260 4933436I01Rik-201ENSMUST00000026325 1426 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Lire1P11260 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC5.83□□□□□ -1.48
Lire1P11260 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
Lire1P11260 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Lire1P11260 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Lire1P11260 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Lire1P11260 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Lire1P11260 Gm33594-201ENSMUST00000209502 1333 ntTSL 5 BASIC5.83□□□□□ -1.48
Lire1P11260 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC5.83□□□□□ -1.48
Lire1P11260 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Lire1P11260 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Lire1P11260 Gm14733-201ENSMUST00000117680 133 ntBASIC5.83□□□□□ -1.48
Lire1P11260 Gm13265-201ENSMUST00000118090 421 ntBASIC5.83□□□□□ -1.48
Lire1P11260 Gm4342-201ENSMUST00000118982 367 ntBASIC5.83□□□□□ -1.48
Lire1P11260 Gm14038-201ENSMUST00000121500 807 ntBASIC5.83□□□□□ -1.48
Lire1P11260 Gm6977-201ENSMUST00000121568 512 ntBASIC5.83□□□□□ -1.48
Lire1P11260 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Lire1P11260 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Lire1P11260 Gm17137-202ENSMUST00000165729 957 ntBASIC5.83□□□□□ -1.48
Lire1P11260 Olfr92-201ENSMUST00000168659 939 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Lire1P11260 Gm17546-201ENSMUST00000168960 733 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Lire1P11260 Gm23450-201ENSMUST00000178285 91 ntBASIC5.83□□□□□ -1.48
Lire1P11260 Gm17048-201ENSMUST00000179266 847 ntBASIC5.83□□□□□ -1.48
Lire1P11260 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC5.83□□□□□ -1.48
Lire1P11260 Gm28351-201ENSMUST00000186261 559 ntTSL 5 BASIC5.83□□□□□ -1.48
Lire1P11260 Frmd8os-202ENSMUST00000187697 516 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Lire1P11260 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC5.83□□□□□ -1.48
Lire1P11260 Gm7166-201ENSMUST00000199715 303 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms