Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm24050-201ENSMUST00000158623 290 ntBASIC5.96□□□□□ -1.46
Hoxd3P09027 Gm6838-201ENSMUST00000172851 582 ntBASIC5.96□□□□□ -1.46
Hoxd3P09027 Gm18191-201ENSMUST00000174624 824 ntBASIC5.96□□□□□ -1.46
Hoxd3P09027 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC5.96□□□□□ -1.46
Hoxd3P09027 Gm24897-201ENSMUST00000179033 107 ntBASIC5.96□□□□□ -1.46
Hoxd3P09027 Gm21726-201ENSMUST00000179654 392 ntBASIC5.96□□□□□ -1.46
Hoxd3P09027 Gm21978-201ENSMUST00000179696 377 ntBASIC5.96□□□□□ -1.46
Hoxd3P09027 Gm5181-201ENSMUST00000183140 971 ntBASIC5.96□□□□□ -1.46
Hoxd3P09027 Gm28257-201ENSMUST00000185244 463 ntBASIC5.96□□□□□ -1.46
Hoxd3P09027 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Hoxd3P09027 Gm28548-201ENSMUST00000191599 409 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Hoxd3P09027 Gm38203-201ENSMUST00000191815 245 ntBASIC5.96□□□□□ -1.46
Hoxd3P09027 Gm37475-201ENSMUST00000193107 1015 ntBASIC5.96□□□□□ -1.46
Hoxd3P09027 Ighv3-7-201ENSMUST00000193370 348 ntBASIC5.96□□□□□ -1.46
Hoxd3P09027 Gm5990-201ENSMUST00000203126 746 ntBASIC5.96□□□□□ -1.46
Hoxd3P09027 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC5.96□□□□□ -1.46
Hoxd3P09027 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC5.96□□□□□ -1.46
Hoxd3P09027 Gm38430-201ENSMUST00000209888 1240 ntBASIC5.96□□□□□ -1.46
Hoxd3P09027 Lnp1-201ENSMUST00000210579 671 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Hoxd3P09027 AC102582.1-201ENSMUST00000215376 378 ntBASIC5.96□□□□□ -1.46
Hoxd3P09027 Akr1c12-201ENSMUST00000021632 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Hoxd3P09027 AC162176.1-201ENSMUST00000216490 618 ntBASIC5.96□□□□□ -1.46
Hoxd3P09027 AC116589.2-201ENSMUST00000220469 478 ntTSL 3 BASIC5.96□□□□□ -1.46
Hoxd3P09027 AC166358.10-201ENSMUST00000220556 144 ntBASIC5.96□□□□□ -1.46
Hoxd3P09027 Gm40853-201ENSMUST00000221342 582 ntBASIC5.96□□□□□ -1.46
Hoxd3P09027 Gm9255-201ENSMUST00000223225 581 ntBASIC5.96□□□□□ -1.46
Hoxd3P09027 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Hoxd3P09027 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Hoxd3P09027 Gm24764-201ENSMUST00000083686 199 ntBASIC5.96□□□□□ -1.46
Hoxd3P09027 Gm10197-201ENSMUST00000086887 201 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Hoxd3P09027 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Hoxd3P09027 Gm10794-201ENSMUST00000099624 207 ntBASIC5.96□□□□□ -1.46
Hoxd3P09027 Cyp1a1-201ENSMUST00000034865 2621 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Hoxd3P09027 Dpcr1-201ENSMUST00000095467 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Hoxd3P09027 Cmah-209ENSMUST00000224953 2221 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Hoxd3P09027 Zmat3-201ENSMUST00000029199 7797 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Hoxd3P09027 Oxtr-202ENSMUST00000204027 3721 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Hoxd3P09027 AC166341.5-201ENSMUST00000222206 1400 ntBASIC5.96□□□□□ -1.46
Hoxd3P09027 Gcnt2-201ENSMUST00000067778 4038 ntAPPRIS P5 TSL 1 (best) BASIC5.96□□□□□ -1.46
Hoxd3P09027 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
Hoxd3P09027 Il5ra-203ENSMUST00000205004 2271 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Hoxd3P09027 Calb1-201ENSMUST00000029876 4222 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Hoxd3P09027 Stat2-201ENSMUST00000085708 4394 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Hoxd3P09027 Gpbp1-202ENSMUST00000091236 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Hoxd3P09027 AC159326.1-201ENSMUST00000219989 1302 ntBASIC5.96□□□□□ -1.46
Hoxd3P09027 Gm29226-201ENSMUST00000186871 2167 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Hoxd3P09027 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Hoxd3P09027 Slc51a-201ENSMUST00000042042 1600 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Hoxd3P09027 St18-201ENSMUST00000043578 5862 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Hoxd3P09027 Slc12a3-205ENSMUST00000212134 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Hoxd3P09027 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Hoxd3P09027 Supt20-203ENSMUST00000197502 2751 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Hoxd3P09027 4921521D15Rik-201ENSMUST00000197578 1927 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Hoxd3P09027 Adamts3-202ENSMUST00000163159 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Hoxd3P09027 Adamts3-201ENSMUST00000061427 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
Hoxd3P09027 Nbas-201ENSMUST00000042953 7234 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Hoxd3P09027 2310058D17Rik-201ENSMUST00000131221 3201 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Hoxd3P09027 Fktn-201ENSMUST00000061771 3370 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Hoxd3P09027 AC153548.1-201ENSMUST00000219283 2661 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Hoxd3P09027 Itpr1-205ENSMUST00000203615 9761 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Hoxd3P09027 Naalad2-201ENSMUST00000001826 2831 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Hoxd3P09027 Gm15101-201ENSMUST00000178818 1502 ntBASIC5.95□□□□□ -1.46
Hoxd3P09027 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC5.95□□□□□ -1.46
Hoxd3P09027 Epb41l2-219ENSMUST00000220290 4345 ntTSL 5 BASIC5.95□□□□□ -1.46
Hoxd3P09027 Trip12-201ENSMUST00000027421 9632 ntAPPRIS P2 TSL 5 BASIC5.95□□□□□ -1.46
Hoxd3P09027 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Hoxd3P09027 1500026H17Rik-201ENSMUST00000181598 3027 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Hoxd3P09027 Ccdc39-201ENSMUST00000029222 3606 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Hoxd3P09027 Phf21a-207ENSMUST00000111293 3900 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Hoxd3P09027 Gm10401-201ENSMUST00000100848 607 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Hoxd3P09027 Gm7982-201ENSMUST00000101011 1443 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Hoxd3P09027 Gm6351-201ENSMUST00000101021 1443 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Hoxd3P09027 Gm24935-201ENSMUST00000103770 110 ntBASIC5.95□□□□□ -1.46
Hoxd3P09027 Gm13871-201ENSMUST00000107318 936 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Hoxd3P09027 Gm11757-201ENSMUST00000107320 936 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Hoxd3P09027 Gm11758-201ENSMUST00000107326 936 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Hoxd3P09027 1700029I15Rik-202ENSMUST00000111280 416 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Hoxd3P09027 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC5.95□□□□□ -1.46
Hoxd3P09027 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Hoxd3P09027 Gm7658-201ENSMUST00000119064 1124 ntBASIC5.95□□□□□ -1.46
Hoxd3P09027 Gm11719-201ENSMUST00000119399 351 ntBASIC5.95□□□□□ -1.46
Hoxd3P09027 Gm12229-201ENSMUST00000120487 468 ntBASIC5.95□□□□□ -1.46
Hoxd3P09027 Gm28053-201ENSMUST00000127537 350 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
Hoxd3P09027 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Hoxd3P09027 Gm15834-202ENSMUST00000139825 2613 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Hoxd3P09027 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC5.95□□□□□ -1.46
Hoxd3P09027 Gm22847-201ENSMUST00000157707 105 ntBASIC5.95□□□□□ -1.46
Hoxd3P09027 Gm23499-201ENSMUST00000157736 268 ntBASIC5.95□□□□□ -1.46
Hoxd3P09027 Gm16038-201ENSMUST00000159317 193 ntBASIC5.95□□□□□ -1.46
Hoxd3P09027 Gm10804-202ENSMUST00000162565 867 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Hoxd3P09027 Tmem258-204ENSMUST00000166412 447 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Hoxd3P09027 Fth-ps2-201ENSMUST00000168364 516 ntBASIC5.95□□□□□ -1.46
Hoxd3P09027 Gm25243-201ENSMUST00000174912 207 ntBASIC5.95□□□□□ -1.46
Hoxd3P09027 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Hoxd3P09027 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Hoxd3P09027 Gm28006-201ENSMUST00000183841 122 ntBASIC5.95□□□□□ -1.46
Hoxd3P09027 Gm28869-201ENSMUST00000187199 811 ntTSL 3 BASIC5.95□□□□□ -1.46
Hoxd3P09027 Scgb2b6-201ENSMUST00000188132 330 ntBASIC5.95□□□□□ -1.46
Hoxd3P09027 Gm8141-201ENSMUST00000190856 1723 ntBASIC5.95□□□□□ -1.46
Hoxd3P09027 Gm43590-201ENSMUST00000195987 387 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms