Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Gm6175-201ENSMUST00000121351 400 ntBASIC5.96□□□□□ -1.46
Cldn5O54942 Gm12322-201ENSMUST00000121605 389 ntBASIC5.96□□□□□ -1.46
Cldn5O54942 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC5.96□□□□□ -1.46
Cldn5O54942 Spdya-203ENSMUST00000144142 933 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Cldn5O54942 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC5.96□□□□□ -1.46
Cldn5O54942 Tmem27-201ENSMUST00000015545 1262 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Cldn5O54942 Gm26069-201ENSMUST00000157497 277 ntBASIC5.96□□□□□ -1.46
Cldn5O54942 Gm23774-201ENSMUST00000158990 131 ntBASIC5.96□□□□□ -1.46
Cldn5O54942 A730017C20Rik-206ENSMUST00000175830 731 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
Cldn5O54942 Gm1972-201ENSMUST00000181606 964 ntBASIC5.96□□□□□ -1.46
Cldn5O54942 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Cldn5O54942 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC5.96□□□□□ -1.46
Cldn5O54942 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC5.96□□□□□ -1.46
Cldn5O54942 Gm37355-201ENSMUST00000193345 606 ntBASIC5.96□□□□□ -1.46
Cldn5O54942 Gm42522-201ENSMUST00000196071 255 ntBASIC5.96□□□□□ -1.46
Cldn5O54942 Gm7733-201ENSMUST00000199038 919 ntBASIC5.96□□□□□ -1.46
Cldn5O54942 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC5.96□□□□□ -1.46
Cldn5O54942 Gm45525-201ENSMUST00000210800 389 ntBASIC5.96□□□□□ -1.46
Cldn5O54942 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Cldn5O54942 Gm31904-201ENSMUST00000219446 877 ntTSL 5 BASIC5.96□□□□□ -1.46
Cldn5O54942 Gm7887-201ENSMUST00000056948 537 ntBASIC5.96□□□□□ -1.46
Cldn5O54942 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
Cldn5O54942 Olfr352-201ENSMUST00000065416 948 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Cldn5O54942 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Cldn5O54942 Gm44675-201ENSMUST00000208188 2927 ntBASIC5.96□□□□□ -1.46
Cldn5O54942 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC5.96□□□□□ -1.46
Cldn5O54942 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Cldn5O54942 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Cldn5O54942 Vmn2r61-201ENSMUST00000166131 2598 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Cldn5O54942 Gm7680-201ENSMUST00000216198 1348 ntBASIC5.96□□□□□ -1.46
Cldn5O54942 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Cldn5O54942 Gm42923-201ENSMUST00000198438 2896 ntBASIC5.96□□□□□ -1.46
Cldn5O54942 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Cldn5O54942 Gm37142-201ENSMUST00000193718 3110 ntBASIC5.95□□□□□ -1.46
Cldn5O54942 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC5.95□□□□□ -1.46
Cldn5O54942 Gm13219-203ENSMUST00000154223 1843 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Cldn5O54942 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Cldn5O54942 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC5.95□□□□□ -1.46
Cldn5O54942 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC5.95□□□□□ -1.46
Cldn5O54942 Ear-ps2-201ENSMUST00000100689 466 ntBASIC5.95□□□□□ -1.46
Cldn5O54942 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Cldn5O54942 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Cldn5O54942 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Cldn5O54942 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC5.95□□□□□ -1.46
Cldn5O54942 Gm16007-201ENSMUST00000117837 286 ntBASIC5.95□□□□□ -1.46
Cldn5O54942 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Cldn5O54942 Gm14220-201ENSMUST00000118114 449 ntBASIC5.95□□□□□ -1.46
Cldn5O54942 Gm15238-201ENSMUST00000119938 1296 ntBASIC5.95□□□□□ -1.46
Cldn5O54942 Gm8061-201ENSMUST00000122380 350 ntBASIC5.95□□□□□ -1.46
Cldn5O54942 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Cldn5O54942 Gm17711-201ENSMUST00000172028 237 ntBASIC5.95□□□□□ -1.46
Cldn5O54942 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC5.95□□□□□ -1.46
Cldn5O54942 Gm23631-201ENSMUST00000175291 123 ntBASIC5.95□□□□□ -1.46
Cldn5O54942 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC5.95□□□□□ -1.46
Cldn5O54942 Mir7008-201ENSMUST00000184398 63 ntBASIC5.95□□□□□ -1.46
Cldn5O54942 Mir7037-201ENSMUST00000184414 65 ntBASIC5.95□□□□□ -1.46
Cldn5O54942 Gimd1-202ENSMUST00000196701 654 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
Cldn5O54942 Gm18702-201ENSMUST00000196923 588 ntBASIC5.95□□□□□ -1.46
Cldn5O54942 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC5.95□□□□□ -1.46
Cldn5O54942 Gm43054-201ENSMUST00000199495 884 ntBASIC5.95□□□□□ -1.46
Cldn5O54942 Gm44108-201ENSMUST00000203525 422 ntBASIC5.95□□□□□ -1.46
Cldn5O54942 Gm44221-201ENSMUST00000203552 388 ntBASIC5.95□□□□□ -1.46
Cldn5O54942 Gm44607-201ENSMUST00000205611 1090 ntBASIC5.95□□□□□ -1.46
Cldn5O54942 Gm45359-201ENSMUST00000210635 427 ntBASIC5.95□□□□□ -1.46
Cldn5O54942 Gm45249-201ENSMUST00000211021 348 ntBASIC5.95□□□□□ -1.46
Cldn5O54942 Gm18409-202ENSMUST00000220105 529 ntBASIC5.95□□□□□ -1.46
Cldn5O54942 AC164618.3-201ENSMUST00000224863 681 ntBASIC5.95□□□□□ -1.46
Cldn5O54942 AC125405.1-201ENSMUST00000226406 589 ntBASIC5.95□□□□□ -1.46
Cldn5O54942 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC5.95□□□□□ -1.46
Cldn5O54942 AC123665.4-201ENSMUST00000228790 249 ntBASIC5.95□□□□□ -1.46
Cldn5O54942 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Cldn5O54942 Rnase2a-201ENSMUST00000061936 690 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Cldn5O54942 Mir412-201ENSMUST00000083636 80 ntBASIC5.95□□□□□ -1.46
Cldn5O54942 Olfr1348-201ENSMUST00000086319 957 ntTSL 5 BASIC5.95□□□□□ -1.46
Cldn5O54942 Xlr5b-201ENSMUST00000097221 864 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Cldn5O54942 4930432M17Rik-201ENSMUST00000098646 525 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Cldn5O54942 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC5.95□□□□□ -1.46
Cldn5O54942 Olfr633-202ENSMUST00000216006 3915 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Cldn5O54942 Olfr703-202ENSMUST00000216254 1920 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Cldn5O54942 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Cldn5O54942 AC154734.1-201ENSMUST00000219957 2141 ntBASIC5.95□□□□□ -1.46
Cldn5O54942 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC5.95□□□□□ -1.46
Cldn5O54942 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC5.95□□□□□ -1.46
Cldn5O54942 Gm33336-201ENSMUST00000219656 1676 ntTSL 5 BASIC5.94□□□□□ -1.46
Cldn5O54942 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Cldn5O54942 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Cldn5O54942 AC154576.1-202ENSMUST00000223966 3320 ntBASIC5.94□□□□□ -1.46
Cldn5O54942 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Cldn5O54942 Gm37249-201ENSMUST00000195185 2869 ntBASIC5.94□□□□□ -1.46
Cldn5O54942 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Cldn5O54942 Gm42541-201ENSMUST00000199871 2249 ntBASIC5.94□□□□□ -1.46
Cldn5O54942 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Cldn5O54942 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Cldn5O54942 AC120375.1-201ENSMUST00000227034 3612 ntBASIC5.94□□□□□ -1.46
Cldn5O54942 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Cldn5O54942 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC5.94□□□□□ -1.46
Cldn5O54942 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Cldn5O54942 Prl8a6-203ENSMUST00000110355 843 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Cldn5O54942 Gm15421-202ENSMUST00000118224 399 ntBASIC5.94□□□□□ -1.46
Cldn5O54942 Gm4989-201ENSMUST00000118711 749 ntBASIC5.94□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 192.7 ms