Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Ighv1-3-201ENSMUST00000192764 302 ntBASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Gm43595-201ENSMUST00000196464 1071 ntBASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Gm43147-201ENSMUST00000196944 542 ntBASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Gm2287-201ENSMUST00000197417 1084 ntBASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Gm43088-201ENSMUST00000197530 2347 ntBASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Gm43228-201ENSMUST00000200735 264 ntBASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Gm43810-201ENSMUST00000201018 232 ntBASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Gm4605-201ENSMUST00000203148 625 ntBASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Gm5314-201ENSMUST00000204852 466 ntBASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Gm17992-201ENSMUST00000207346 1072 ntBASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Gm31663-202ENSMUST00000208481 1190 ntBASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Gm9375-201ENSMUST00000208899 903 ntBASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Gm31045-201ENSMUST00000211266 922 ntTSL 5 BASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Gm34853-201ENSMUST00000211662 509 ntTSL 5 BASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 AC156832.3-201ENSMUST00000215591 435 ntBASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 AC091260.1-201ENSMUST00000216112 229 ntBASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Gm8264-201ENSMUST00000217801 465 ntBASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Pln-206ENSMUST00000220197 1854 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 AC147245.1-201ENSMUST00000223294 677 ntBASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 CT010480.5-201ENSMUST00000225026 217 ntBASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 AL590614.1-201ENSMUST00000226037 268 ntBASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Olfr1356-201ENSMUST00000061289 963 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Rps26-ps1-201ENSMUST00000077208 449 ntBASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Fmn1-202ENSMUST00000099576 11817 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Mpp5-201ENSMUST00000082024 5470 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Gm18908-201ENSMUST00000207125 1483 ntBASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Hspa13-202ENSMUST00000114244 2674 ntTSL 5 BASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Noc3l-201ENSMUST00000025963 3977 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Gm43496-201ENSMUST00000201682 3001 ntBASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Gm44215-201ENSMUST00000204910 2711 ntBASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Gm25546-201ENSMUST00000103977 132 ntBASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Xlr5d-ps-201ENSMUST00000117501 782 ntBASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Gm12734-201ENSMUST00000120228 948 ntBASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Gm16463-201ENSMUST00000120527 721 ntBASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Rpl15-ps1-201ENSMUST00000120694 564 ntBASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Gm14038-201ENSMUST00000121500 807 ntBASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Gm12145-201ENSMUST00000142108 217 ntTSL 3 BASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 1700001G01Rik-204ENSMUST00000153022 928 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Gm25669-201ENSMUST00000157699 112 ntBASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Gm23205-201ENSMUST00000158671 103 ntBASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Gm17022-201ENSMUST00000166415 922 ntBASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Vmn1r-ps45-201ENSMUST00000174106 955 ntBASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Serpinb10-202ENSMUST00000182198 1265 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Gm21392-201ENSMUST00000182950 972 ntBASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Gm27158-201ENSMUST00000183813 238 ntBASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Gm27236-201ENSMUST00000184147 442 ntBASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Gm27178-201ENSMUST00000184962 340 ntBASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Gm21803-201ENSMUST00000188897 693 ntBASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Gm28567-201ENSMUST00000190270 693 ntBASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Gm28655-201ENSMUST00000191538 692 ntBASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Gm17953-201ENSMUST00000192061 667 ntBASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Gm37979-201ENSMUST00000193065 712 ntBASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Gm37044-201ENSMUST00000193531 693 ntBASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Serpinb10-203ENSMUST00000194951 1194 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Gm38369-201ENSMUST00000195101 693 ntBASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Gm7270-201ENSMUST00000195818 1128 ntBASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Igkv12-49-201ENSMUST00000197714 278 ntBASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Trav15d-3-201ENSMUST00000198604 167 ntBASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 2010309G21Rik-201ENSMUST00000198927 458 ntTSL 3 BASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Gm44221-201ENSMUST00000203552 388 ntBASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Gm38430-201ENSMUST00000209888 1240 ntBASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 Gm45789-201ENSMUST00000213038 364 ntBASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 AC124729.1-202ENSMUST00000225587 938 ntBASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 AC117814.1-201ENSMUST00000226135 352 ntBASIC5.94□□□□□ -1.46
Pcdh1F7BJK1 AC106830.2-201ENSMUST00000226624 943 ntBASIC5.94□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms