Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Snora44-201ENSMUST00000082670 129 ntBASIC5.5□□□□□ -1.53
Upk3aQ9JKX8 Gm20644-201ENSMUST00000176721 2063 ntBASIC5.5□□□□□ -1.53
Upk3aQ9JKX8 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Upk3aQ9JKX8 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC5.5□□□□□ -1.53
Upk3aQ9JKX8 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Upk3aQ9JKX8 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Upk3aQ9JKX8 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Upk3aQ9JKX8 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Upk3aQ9JKX8 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
Upk3aQ9JKX8 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Upk3aQ9JKX8 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC5.49□□□□□ -1.53
Upk3aQ9JKX8 Olfr259-203ENSMUST00000215828 4095 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Upk3aQ9JKX8 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Upk3aQ9JKX8 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Upk3aQ9JKX8 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Upk3aQ9JKX8 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Upk3aQ9JKX8 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC5.49□□□□□ -1.53
Upk3aQ9JKX8 Gm43485-201ENSMUST00000199292 1710 ntBASIC5.49□□□□□ -1.53
Upk3aQ9JKX8 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Upk3aQ9JKX8 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Upk3aQ9JKX8 AC121942.1-201ENSMUST00000224459 2891 ntBASIC5.49□□□□□ -1.53
Upk3aQ9JKX8 Tor1aip1-210ENSMUST00000169241 3716 ntAPPRIS ALT2 TSL 3 BASIC5.49□□□□□ -1.53
Upk3aQ9JKX8 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC5.49□□□□□ -1.53
Upk3aQ9JKX8 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Upk3aQ9JKX8 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Upk3aQ9JKX8 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC5.49□□□□□ -1.53
Upk3aQ9JKX8 Gm12850-201ENSMUST00000119210 436 ntBASIC5.49□□□□□ -1.53
Upk3aQ9JKX8 Gm5405-201ENSMUST00000120478 609 ntBASIC5.49□□□□□ -1.53
Upk3aQ9JKX8 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC5.49□□□□□ -1.53
Upk3aQ9JKX8 Gm8323-201ENSMUST00000168436 1201 ntBASIC5.49□□□□□ -1.53
Upk3aQ9JKX8 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC5.49□□□□□ -1.53
Upk3aQ9JKX8 Gm23162-201ENSMUST00000175081 121 ntBASIC5.49□□□□□ -1.53
Upk3aQ9JKX8 Gm23872-201ENSMUST00000175432 77 ntBASIC5.49□□□□□ -1.53
Upk3aQ9JKX8 Gm2877-201ENSMUST00000178248 1204 ntBASIC5.49□□□□□ -1.53
Upk3aQ9JKX8 Gm8324-201ENSMUST00000178911 1204 ntBASIC5.49□□□□□ -1.53
Upk3aQ9JKX8 Gm2871-201ENSMUST00000179984 1204 ntBASIC5.49□□□□□ -1.53
Upk3aQ9JKX8 Gm27024-201ENSMUST00000182561 755 ntBASIC5.49□□□□□ -1.53
Upk3aQ9JKX8 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC5.49□□□□□ -1.53
Upk3aQ9JKX8 Gm36999-201ENSMUST00000192756 1046 ntBASIC5.49□□□□□ -1.53
Upk3aQ9JKX8 Gm38097-201ENSMUST00000192936 439 ntBASIC5.49□□□□□ -1.53
Upk3aQ9JKX8 n-TStga1-201ENSMUST00000199903 109 ntBASIC5.49□□□□□ -1.53
Upk3aQ9JKX8 Gm45525-201ENSMUST00000210800 389 ntBASIC5.49□□□□□ -1.53
Upk3aQ9JKX8 AC102287.1-201ENSMUST00000211412 454 ntBASIC5.49□□□□□ -1.53
Upk3aQ9JKX8 AC161586.1-201ENSMUST00000223232 547 ntBASIC5.49□□□□□ -1.53
Upk3aQ9JKX8 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
Upk3aQ9JKX8 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Upk3aQ9JKX8 Gm16335-201ENSMUST00000077495 309 ntBASIC5.49□□□□□ -1.53
Upk3aQ9JKX8 Rpl35a-ps7-201ENSMUST00000080603 333 ntBASIC5.49□□□□□ -1.53
Upk3aQ9JKX8 n-R5s88-201ENSMUST00000083173 118 ntBASIC5.49□□□□□ -1.53
Upk3aQ9JKX8 Taar4-201ENSMUST00000092660 1044 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Upk3aQ9JKX8 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Upk3aQ9JKX8 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Upk3aQ9JKX8 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Upk3aQ9JKX8 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC5.49□□□□□ -1.53
Upk3aQ9JKX8 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Upk3aQ9JKX8 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Upk3aQ9JKX8 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Upk3aQ9JKX8 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Upk3aQ9JKX8 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC5.49□□□□□ -1.53
Upk3aQ9JKX8 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Upk3aQ9JKX8 AC160029.1-201ENSMUST00000219628 2678 ntBASIC5.49□□□□□ -1.53
Upk3aQ9JKX8 Gm38257-201ENSMUST00000195881 2761 ntBASIC5.49□□□□□ -1.53
Upk3aQ9JKX8 Olfr293-202ENSMUST00000214401 2852 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Upk3aQ9JKX8 Gm38198-201ENSMUST00000191772 3581 ntBASIC5.49□□□□□ -1.53
Upk3aQ9JKX8 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC5.49□□□□□ -1.53
Upk3aQ9JKX8 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC5.48□□□□□ -1.53
Upk3aQ9JKX8 Olfr1330-203ENSMUST00000106361 1419 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Upk3aQ9JKX8 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Upk3aQ9JKX8 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
Upk3aQ9JKX8 Gm14886-201ENSMUST00000117208 2629 ntBASIC5.48□□□□□ -1.53
Upk3aQ9JKX8 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Upk3aQ9JKX8 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Upk3aQ9JKX8 Olfr1295-203ENSMUST00000217772 5539 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Upk3aQ9JKX8 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
Upk3aQ9JKX8 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Upk3aQ9JKX8 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Upk3aQ9JKX8 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Upk3aQ9JKX8 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Upk3aQ9JKX8 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Upk3aQ9JKX8 Zfp605-201ENSMUST00000086686 2085 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
Upk3aQ9JKX8 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
Upk3aQ9JKX8 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC5.48□□□□□ -1.53
Upk3aQ9JKX8 Gm19125-201ENSMUST00000188408 1383 ntBASIC5.48□□□□□ -1.53
Upk3aQ9JKX8 Mir546-201ENSMUST00000102105 121 ntBASIC5.48□□□□□ -1.53
Upk3aQ9JKX8 Mir711-201ENSMUST00000102188 82 ntBASIC5.48□□□□□ -1.53
Upk3aQ9JKX8 Gm23294-201ENSMUST00000104150 164 ntBASIC5.48□□□□□ -1.53
Upk3aQ9JKX8 Gm11908-201ENSMUST00000117755 347 ntBASIC5.48□□□□□ -1.53
Upk3aQ9JKX8 Olfr590-ps1-201ENSMUST00000118801 898 ntBASIC5.48□□□□□ -1.53
Upk3aQ9JKX8 Gm8430-201ENSMUST00000119780 471 ntBASIC5.48□□□□□ -1.53
Upk3aQ9JKX8 Gm12482-201ENSMUST00000120435 630 ntBASIC5.48□□□□□ -1.53
Upk3aQ9JKX8 Gm9428-201ENSMUST00000127214 769 ntBASIC5.48□□□□□ -1.53
Upk3aQ9JKX8 1700019G24Rik-201ENSMUST00000130004 503 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Upk3aQ9JKX8 Gm14216-201ENSMUST00000136046 409 ntTSL 3 BASIC5.48□□□□□ -1.53
Upk3aQ9JKX8 Gm24363-201ENSMUST00000158440 311 ntBASIC5.48□□□□□ -1.53
Upk3aQ9JKX8 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Upk3aQ9JKX8 Gm26970-201ENSMUST00000182990 964 ntBASIC5.48□□□□□ -1.53
Upk3aQ9JKX8 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC5.48□□□□□ -1.53
Upk3aQ9JKX8 Gm27602-201ENSMUST00000183861 111 ntBASIC5.48□□□□□ -1.53
Upk3aQ9JKX8 Gm27855-201ENSMUST00000184122 128 ntBASIC5.48□□□□□ -1.53
Upk3aQ9JKX8 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms