Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC6.53□□□□□ -1.36
Smc1aQ9CU62 Gm44209-201ENSMUST00000204556 4153 ntBASIC6.53□□□□□ -1.36
Smc1aQ9CU62 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Smc1aQ9CU62 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC6.53□□□□□ -1.36
Smc1aQ9CU62 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC6.53□□□□□ -1.36
Smc1aQ9CU62 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Smc1aQ9CU62 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Smc1aQ9CU62 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
Smc1aQ9CU62 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
Smc1aQ9CU62 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Smc1aQ9CU62 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC6.52□□□□□ -1.37
Smc1aQ9CU62 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC6.52□□□□□ -1.37
Smc1aQ9CU62 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Smc1aQ9CU62 Olfr671-202ENSMUST00000210963 3157 ntTSL 5 BASIC6.52□□□□□ -1.37
Smc1aQ9CU62 Gm37880-201ENSMUST00000192216 3257 ntBASIC6.52□□□□□ -1.37
Smc1aQ9CU62 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
Smc1aQ9CU62 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Smc1aQ9CU62 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Smc1aQ9CU62 Sub1-202ENSMUST00000110504 675 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Smc1aQ9CU62 Gm12901-201ENSMUST00000118690 532 ntBASIC6.52□□□□□ -1.37
Smc1aQ9CU62 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC6.52□□□□□ -1.37
Smc1aQ9CU62 Gm14294-201ENSMUST00000119749 751 ntBASIC6.52□□□□□ -1.37
Smc1aQ9CU62 Gm13998-201ENSMUST00000120952 335 ntBASIC6.52□□□□□ -1.37
Smc1aQ9CU62 Platr28-201ENSMUST00000133824 1294 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Smc1aQ9CU62 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC6.52□□□□□ -1.37
Smc1aQ9CU62 5330429C05Rik-201ENSMUST00000154615 487 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Smc1aQ9CU62 Gm22724-201ENSMUST00000158091 127 ntBASIC6.52□□□□□ -1.37
Smc1aQ9CU62 Gm15740-201ENSMUST00000159703 1292 ntBASIC6.52□□□□□ -1.37
Smc1aQ9CU62 Gm26238-201ENSMUST00000175538 117 ntBASIC6.52□□□□□ -1.37
Smc1aQ9CU62 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Smc1aQ9CU62 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Smc1aQ9CU62 Gm32158-201ENSMUST00000200135 404 ntBASIC6.52□□□□□ -1.37
Smc1aQ9CU62 Gm8930-201ENSMUST00000201693 768 ntBASIC6.52□□□□□ -1.37
Smc1aQ9CU62 Gm4032-201ENSMUST00000210886 487 ntBASIC6.52□□□□□ -1.37
Smc1aQ9CU62 Gm9269-201ENSMUST00000221661 578 ntBASIC6.52□□□□□ -1.37
Smc1aQ9CU62 CT485612.1-201ENSMUST00000222555 382 ntBASIC6.52□□□□□ -1.37
Smc1aQ9CU62 AC123061.2-201ENSMUST00000226234 802 ntBASIC6.52□□□□□ -1.37
Smc1aQ9CU62 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC6.52□□□□□ -1.37
Smc1aQ9CU62 Olfr121-201ENSMUST00000074555 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Smc1aQ9CU62 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Smc1aQ9CU62 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Smc1aQ9CU62 Gm37897-201ENSMUST00000192613 3561 ntBASIC6.52□□□□□ -1.37
Smc1aQ9CU62 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Smc1aQ9CU62 Olfr510-204ENSMUST00000217170 2997 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Smc1aQ9CU62 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC6.52□□□□□ -1.37
Smc1aQ9CU62 Dnah3-204ENSMUST00000209154 12265 ntAPPRIS P5 TSL 5 BASIC6.52□□□□□ -1.37
Smc1aQ9CU62 AC153912.2-201ENSMUST00000215840 2015 ntBASIC6.52□□□□□ -1.37
Smc1aQ9CU62 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
Smc1aQ9CU62 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Smc1aQ9CU62 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Smc1aQ9CU62 Gm37370-201ENSMUST00000191996 1410 ntBASIC6.51□□□□□ -1.37
Smc1aQ9CU62 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Smc1aQ9CU62 Gm42496-201ENSMUST00000197976 3241 ntBASIC6.51□□□□□ -1.37
Smc1aQ9CU62 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Smc1aQ9CU62 Gm8979-201ENSMUST00000183386 7296 ntBASIC6.51□□□□□ -1.37
Smc1aQ9CU62 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Smc1aQ9CU62 Gm25415-201ENSMUST00000104220 132 ntBASIC6.51□□□□□ -1.37
Smc1aQ9CU62 Gm25564-201ENSMUST00000104604 132 ntBASIC6.51□□□□□ -1.37
Smc1aQ9CU62 Mir466j-201ENSMUST00000116876 122 ntBASIC6.51□□□□□ -1.37
Smc1aQ9CU62 Gm6884-201ENSMUST00000119318 615 ntBASIC6.51□□□□□ -1.37
Smc1aQ9CU62 Gm12596-201ENSMUST00000124589 673 ntTSL 3 BASIC6.51□□□□□ -1.37
Smc1aQ9CU62 Gm23662-201ENSMUST00000158046 111 ntBASIC6.51□□□□□ -1.37
Smc1aQ9CU62 Gm22361-201ENSMUST00000158435 176 ntBASIC6.51□□□□□ -1.37
Smc1aQ9CU62 Gm2058-201ENSMUST00000178791 560 ntBASIC6.51□□□□□ -1.37
Smc1aQ9CU62 Stk-ps2-204ENSMUST00000187808 616 ntBASIC6.51□□□□□ -1.37
Smc1aQ9CU62 Trav3n-2-201ENSMUST00000197693 334 ntBASIC6.51□□□□□ -1.37
Smc1aQ9CU62 Gm29745-201ENSMUST00000198005 687 ntBASIC6.51□□□□□ -1.37
Smc1aQ9CU62 Trav3d-2-201ENSMUST00000199874 334 ntBASIC6.51□□□□□ -1.37
Smc1aQ9CU62 Gm44768-201ENSMUST00000205719 393 ntBASIC6.51□□□□□ -1.37
Smc1aQ9CU62 Gm19182-201ENSMUST00000207139 577 ntBASIC6.51□□□□□ -1.37
Smc1aQ9CU62 Gm44623-201ENSMUST00000207934 434 ntBASIC6.51□□□□□ -1.37
Smc1aQ9CU62 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC6.51□□□□□ -1.37
Smc1aQ9CU62 Gm31904-201ENSMUST00000219446 877 ntTSL 5 BASIC6.51□□□□□ -1.37
Smc1aQ9CU62 Gm18405-201ENSMUST00000220743 511 ntBASIC6.51□□□□□ -1.37
Smc1aQ9CU62 Gm6056-201ENSMUST00000221253 488 ntBASIC6.51□□□□□ -1.37
Smc1aQ9CU62 AC133283.1-201ENSMUST00000228443 859 ntBASIC6.51□□□□□ -1.37
Smc1aQ9CU62 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Smc1aQ9CU62 Gm6776-201ENSMUST00000057752 900 ntBASIC6.51□□□□□ -1.37
Smc1aQ9CU62 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Smc1aQ9CU62 Gm5512-201ENSMUST00000218013 1353 ntBASIC6.51□□□□□ -1.37
Smc1aQ9CU62 Gm42607-201ENSMUST00000200221 3393 ntBASIC6.51□□□□□ -1.37
Smc1aQ9CU62 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
Smc1aQ9CU62 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Smc1aQ9CU62 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
Smc1aQ9CU62 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Smc1aQ9CU62 Olfr1131-202ENSMUST00000213302 1779 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Smc1aQ9CU62 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Smc1aQ9CU62 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC6.51□□□□□ -1.37
Smc1aQ9CU62 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Smc1aQ9CU62 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Smc1aQ9CU62 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Smc1aQ9CU62 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
Smc1aQ9CU62 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Smc1aQ9CU62 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
Smc1aQ9CU62 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Smc1aQ9CU62 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC6.5□□□□□ -1.37
Smc1aQ9CU62 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Smc1aQ9CU62 Gm16751-201ENSMUST00000142212 1685 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Smc1aQ9CU62 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Smc1aQ9CU62 Gm13451-201ENSMUST00000117649 592 ntBASIC6.5□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms