Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Gm19182-201ENSMUST00000207139 577 ntBASIC5.79□□□□□ -1.48
Vps39Q8R5L3 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
Vps39Q8R5L3 Gm45628-201ENSMUST00000210849 274 ntBASIC5.79□□□□□ -1.48
Vps39Q8R5L3 Gm33838-201ENSMUST00000214038 786 ntTSL 5 BASIC5.79□□□□□ -1.48
Vps39Q8R5L3 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC5.79□□□□□ -1.48
Vps39Q8R5L3 Tespa1-202ENSMUST00000217702 1102 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Vps39Q8R5L3 AC153821.1-201ENSMUST00000217893 581 ntTSL 2 BASIC5.79□□□□□ -1.48
Vps39Q8R5L3 AC163621.3-201ENSMUST00000221738 1033 ntTSL 5 BASIC5.79□□□□□ -1.48
Vps39Q8R5L3 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Vps39Q8R5L3 Gm10145-201ENSMUST00000077776 462 ntBASIC5.79□□□□□ -1.48
Vps39Q8R5L3 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Vps39Q8R5L3 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Vps39Q8R5L3 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Vps39Q8R5L3 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC5.79□□□□□ -1.48
Vps39Q8R5L3 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
Vps39Q8R5L3 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Vps39Q8R5L3 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC5.79□□□□□ -1.48
Vps39Q8R5L3 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Vps39Q8R5L3 Cep70-201ENSMUST00000093795 2606 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Vps39Q8R5L3 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Vps39Q8R5L3 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Vps39Q8R5L3 AC133498.1-201ENSMUST00000222871 2925 ntTSL 5 BASIC5.78□□□□□ -1.48
Vps39Q8R5L3 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Vps39Q8R5L3 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC5.78□□□□□ -1.48
Vps39Q8R5L3 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Vps39Q8R5L3 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Vps39Q8R5L3 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
Vps39Q8R5L3 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC5.78□□□□□ -1.48
Vps39Q8R5L3 AC168056.3-201ENSMUST00000225395 2540 ntBASIC5.78□□□□□ -1.48
Vps39Q8R5L3 Olfr585-201ENSMUST00000104881 1030 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Vps39Q8R5L3 Gm14539-201ENSMUST00000117527 174 ntBASIC5.78□□□□□ -1.48
Vps39Q8R5L3 Gm14791-201ENSMUST00000119061 1166 ntBASIC5.78□□□□□ -1.48
Vps39Q8R5L3 Gm12307-201ENSMUST00000120581 590 ntBASIC5.78□□□□□ -1.48
Vps39Q8R5L3 Speer3-201ENSMUST00000124677 1192 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Vps39Q8R5L3 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC5.78□□□□□ -1.48
Vps39Q8R5L3 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Vps39Q8R5L3 Gm12440-201ENSMUST00000155224 1070 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Vps39Q8R5L3 Gm26106-201ENSMUST00000157254 228 ntBASIC5.78□□□□□ -1.48
Vps39Q8R5L3 Cabcoco1-202ENSMUST00000166919 1016 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Vps39Q8R5L3 Vmn1r123-201ENSMUST00000166948 924 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Vps39Q8R5L3 Olfr92-201ENSMUST00000168659 939 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Vps39Q8R5L3 Gm3344-201ENSMUST00000169610 603 ntBASIC5.78□□□□□ -1.48
Vps39Q8R5L3 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC5.78□□□□□ -1.48
Vps39Q8R5L3 Gm25065-201ENSMUST00000177914 132 ntBASIC5.78□□□□□ -1.48
Vps39Q8R5L3 Gm25891-201ENSMUST00000180050 132 ntBASIC5.78□□□□□ -1.48
Vps39Q8R5L3 Gm4832-201ENSMUST00000182679 399 ntBASIC5.78□□□□□ -1.48
Vps39Q8R5L3 Gm37189-201ENSMUST00000192131 298 ntBASIC5.78□□□□□ -1.48
Vps39Q8R5L3 Gm43762-201ENSMUST00000201521 295 ntBASIC5.78□□□□□ -1.48
Vps39Q8R5L3 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC5.78□□□□□ -1.48
Vps39Q8R5L3 BC024386-204ENSMUST00000209842 688 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Vps39Q8R5L3 CT485607.3-201ENSMUST00000213361 672 ntBASIC5.78□□□□□ -1.48
Vps39Q8R5L3 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Vps39Q8R5L3 Gm34263-202ENSMUST00000214353 303 ntTSL 5 BASIC5.78□□□□□ -1.48
Vps39Q8R5L3 4930591E09Rik-201ENSMUST00000215643 480 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Vps39Q8R5L3 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC5.78□□□□□ -1.48
Vps39Q8R5L3 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Vps39Q8R5L3 AC141425.1-201ENSMUST00000224989 265 ntBASIC5.78□□□□□ -1.48
Vps39Q8R5L3 AC133203.2-201ENSMUST00000226709 464 ntBASIC5.78□□□□□ -1.48
Vps39Q8R5L3 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Vps39Q8R5L3 Ctag2-201ENSMUST00000033524 854 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Vps39Q8R5L3 Olfr1444-201ENSMUST00000059675 1129 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Vps39Q8R5L3 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Vps39Q8R5L3 Olfr486-201ENSMUST00000072035 945 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Vps39Q8R5L3 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Vps39Q8R5L3 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Vps39Q8R5L3 Olfr376-201ENSMUST00000078952 1210 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
Vps39Q8R5L3 Olfr487-201ENSMUST00000081996 945 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Vps39Q8R5L3 Gm23502-201ENSMUST00000083902 145 ntBASIC5.78□□□□□ -1.48
Vps39Q8R5L3 Mup8-201ENSMUST00000095058 925 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
Vps39Q8R5L3 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
Vps39Q8R5L3 Gm43887-201ENSMUST00000204727 3186 ntBASIC5.78□□□□□ -1.48
Vps39Q8R5L3 Gm43788-201ENSMUST00000201539 2417 ntBASIC5.78□□□□□ -1.48
Vps39Q8R5L3 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
Vps39Q8R5L3 Gm45562-201ENSMUST00000210015 1537 ntBASIC5.78□□□□□ -1.48
Vps39Q8R5L3 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Vps39Q8R5L3 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Vps39Q8R5L3 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.48
Vps39Q8R5L3 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Vps39Q8R5L3 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC5.77□□□□□ -1.49
Vps39Q8R5L3 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Vps39Q8R5L3 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC5.77□□□□□ -1.49
Vps39Q8R5L3 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC5.77□□□□□ -1.49
Vps39Q8R5L3 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC5.77□□□□□ -1.49
Vps39Q8R5L3 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC5.77□□□□□ -1.49
Vps39Q8R5L3 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Vps39Q8R5L3 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Vps39Q8R5L3 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Vps39Q8R5L3 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Vps39Q8R5L3 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC5.77□□□□□ -1.49
Vps39Q8R5L3 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Vps39Q8R5L3 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC5.77□□□□□ -1.49
Vps39Q8R5L3 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC5.77□□□□□ -1.49
Vps39Q8R5L3 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Vps39Q8R5L3 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC5.77□□□□□ -1.49
Vps39Q8R5L3 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Vps39Q8R5L3 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC5.77□□□□□ -1.49
Vps39Q8R5L3 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Vps39Q8R5L3 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC5.77□□□□□ -1.49
Vps39Q8R5L3 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC5.77□□□□□ -1.49
Vps39Q8R5L3 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms