Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Olfr1500-207ENSMUST00000219674 2287 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Brf1Q8CFK2 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC7.09□□□□□ -1.27
Brf1Q8CFK2 Gm9968-201ENSMUST00000147504 2990 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Brf1Q8CFK2 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC7.09□□□□□ -1.27
Brf1Q8CFK2 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Brf1Q8CFK2 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Brf1Q8CFK2 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Brf1Q8CFK2 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
Brf1Q8CFK2 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
Brf1Q8CFK2 Pon3-201ENSMUST00000031773 1837 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Brf1Q8CFK2 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Brf1Q8CFK2 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
Brf1Q8CFK2 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Brf1Q8CFK2 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Brf1Q8CFK2 Platr23-201ENSMUST00000180797 2439 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Brf1Q8CFK2 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC7.08□□□□□ -1.28
Brf1Q8CFK2 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Brf1Q8CFK2 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Brf1Q8CFK2 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Brf1Q8CFK2 Olfr745-202ENSMUST00000213127 1930 ntTSL 5 BASIC7.08□□□□□ -1.28
Brf1Q8CFK2 Gm14772-201ENSMUST00000116562 514 ntBASIC7.08□□□□□ -1.28
Brf1Q8CFK2 Gm11866-201ENSMUST00000120209 335 ntBASIC7.08□□□□□ -1.28
Brf1Q8CFK2 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC7.08□□□□□ -1.28
Brf1Q8CFK2 4930583P06Rik-201ENSMUST00000136658 706 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Brf1Q8CFK2 Gm15691-201ENSMUST00000138626 849 ntTSL 3 BASIC7.08□□□□□ -1.28
Brf1Q8CFK2 Gm16086-201ENSMUST00000143652 371 ntTSL 3 BASIC7.08□□□□□ -1.28
Brf1Q8CFK2 1700095A21Rik-201ENSMUST00000145269 1069 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Brf1Q8CFK2 Tmem27-201ENSMUST00000015545 1262 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Brf1Q8CFK2 Gm23995-201ENSMUST00000158060 129 ntBASIC7.08□□□□□ -1.28
Brf1Q8CFK2 Mup8-202ENSMUST00000163931 986 ntAPPRIS P3 TSL 5 BASIC7.08□□□□□ -1.28
Brf1Q8CFK2 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Brf1Q8CFK2 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC7.08□□□□□ -1.28
Brf1Q8CFK2 Kcnj13-202ENSMUST00000174179 261 ntTSL 5 BASIC7.08□□□□□ -1.28
Brf1Q8CFK2 1810053B23Rik-201ENSMUST00000185242 634 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Brf1Q8CFK2 Gm18692-201ENSMUST00000193047 511 ntBASIC7.08□□□□□ -1.28
Brf1Q8CFK2 Gm29736-201ENSMUST00000198189 385 ntBASIC7.08□□□□□ -1.28
Brf1Q8CFK2 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC7.08□□□□□ -1.28
Brf1Q8CFK2 AC159476.2-201ENSMUST00000216221 418 ntBASIC7.08□□□□□ -1.28
Brf1Q8CFK2 AC108846.4-201ENSMUST00000216783 341 ntBASIC7.08□□□□□ -1.28
Brf1Q8CFK2 AC134335.1-201ENSMUST00000227626 329 ntBASIC7.08□□□□□ -1.28
Brf1Q8CFK2 AC154323.1-201ENSMUST00000228329 1231 ntBASIC7.08□□□□□ -1.28
Brf1Q8CFK2 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Brf1Q8CFK2 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Brf1Q8CFK2 Olfr231-201ENSMUST00000063030 924 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Brf1Q8CFK2 Gm5142-201ENSMUST00000066558 626 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Brf1Q8CFK2 Olfr1126-201ENSMUST00000071355 945 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Brf1Q8CFK2 Olfr467-201ENSMUST00000084756 927 ntBASIC7.08□□□□□ -1.28
Brf1Q8CFK2 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Brf1Q8CFK2 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Brf1Q8CFK2 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Brf1Q8CFK2 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC7.08□□□□□ -1.28
Brf1Q8CFK2 Gm36936-201ENSMUST00000194508 2749 ntBASIC7.08□□□□□ -1.28
Brf1Q8CFK2 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Brf1Q8CFK2 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Brf1Q8CFK2 Gm33843-201ENSMUST00000219313 1637 ntTSL 5 BASIC7.08□□□□□ -1.28
Brf1Q8CFK2 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Brf1Q8CFK2 Olfr122-204ENSMUST00000217119 2224 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Brf1Q8CFK2 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Brf1Q8CFK2 Cnot2-203ENSMUST00000105267 2800 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Brf1Q8CFK2 Gm38372-201ENSMUST00000194854 4028 ntBASIC7.08□□□□□ -1.28
Brf1Q8CFK2 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC7.08□□□□□ -1.28
Brf1Q8CFK2 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Brf1Q8CFK2 Gm15189-201ENSMUST00000121164 1966 ntBASIC7.08□□□□□ -1.28
Brf1Q8CFK2 Gm30849-201ENSMUST00000214503 1379 ntTSL 5 BASIC7.08□□□□□ -1.28
Brf1Q8CFK2 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC7.07□□□□□ -1.28
Brf1Q8CFK2 Gm43953-201ENSMUST00000203709 2867 ntBASIC7.07□□□□□ -1.28
Brf1Q8CFK2 Olfr110-202ENSMUST00000216472 1721 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Brf1Q8CFK2 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Brf1Q8CFK2 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Brf1Q8CFK2 Gm14805-201ENSMUST00000120172 340 ntBASIC7.07□□□□□ -1.28
Brf1Q8CFK2 Gm14712-201ENSMUST00000120195 772 ntBASIC7.07□□□□□ -1.28
Brf1Q8CFK2 Gm12005-201ENSMUST00000121451 379 ntBASIC7.07□□□□□ -1.28
Brf1Q8CFK2 Gm12494-201ENSMUST00000121684 521 ntBASIC7.07□□□□□ -1.28
Brf1Q8CFK2 Gm15840-201ENSMUST00000122099 943 ntBASIC7.07□□□□□ -1.28
Brf1Q8CFK2 Gm12488-201ENSMUST00000122449 499 ntBASIC7.07□□□□□ -1.28
Brf1Q8CFK2 Crem-207ENSMUST00000126578 915 ntTSL 5 BASIC7.07□□□□□ -1.28
Brf1Q8CFK2 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Brf1Q8CFK2 Gm23467-201ENSMUST00000157127 159 ntBASIC7.07□□□□□ -1.28
Brf1Q8CFK2 Gm23149-201ENSMUST00000158837 230 ntBASIC7.07□□□□□ -1.28
Brf1Q8CFK2 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Brf1Q8CFK2 Gm13147-202ENSMUST00000177526 1173 ntBASIC7.07□□□□□ -1.28
Brf1Q8CFK2 Gm8890-202ENSMUST00000177727 465 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Brf1Q8CFK2 Ap3s1-ps2-201ENSMUST00000178107 579 ntBASIC7.07□□□□□ -1.28
Brf1Q8CFK2 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Brf1Q8CFK2 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC7.07□□□□□ -1.28
Brf1Q8CFK2 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC7.07□□□□□ -1.28
Brf1Q8CFK2 Gm4845-201ENSMUST00000179202 562 ntBASIC7.07□□□□□ -1.28
Brf1Q8CFK2 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC7.07□□□□□ -1.28
Brf1Q8CFK2 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Brf1Q8CFK2 Mir6374-201ENSMUST00000184003 107 ntBASIC7.07□□□□□ -1.28
Brf1Q8CFK2 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC7.07□□□□□ -1.28
Brf1Q8CFK2 Gm2691-201ENSMUST00000203205 901 ntBASIC7.07□□□□□ -1.28
Brf1Q8CFK2 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC7.07□□□□□ -1.28
Brf1Q8CFK2 AL603745.1-201ENSMUST00000215473 532 ntBASIC7.07□□□□□ -1.28
Brf1Q8CFK2 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC7.07□□□□□ -1.28
Brf1Q8CFK2 AC133650.1-201ENSMUST00000217243 578 ntBASIC7.07□□□□□ -1.28
Brf1Q8CFK2 AC132384.3-201ENSMUST00000219709 472 ntBASIC7.07□□□□□ -1.28
Brf1Q8CFK2 AC120375.2-202ENSMUST00000228722 397 ntBASIC7.07□□□□□ -1.28
Brf1Q8CFK2 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Brf1Q8CFK2 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms