Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Gm13770-201ENSMUST00000117149 305 ntBASIC5.65□□□□□ -1.5
Lrif1Q8CDD9 Gm11624-201ENSMUST00000118579 1041 ntBASIC5.65□□□□□ -1.5
Lrif1Q8CDD9 n-R5s19-201ENSMUST00000122793 120 ntBASIC5.65□□□□□ -1.5
Lrif1Q8CDD9 Gm24239-201ENSMUST00000157791 255 ntBASIC5.65□□□□□ -1.5
Lrif1Q8CDD9 Gm17198-201ENSMUST00000171792 1154 ntBASIC5.65□□□□□ -1.5
Lrif1Q8CDD9 Gm22655-201ENSMUST00000174949 96 ntBASIC5.65□□□□□ -1.5
Lrif1Q8CDD9 Gm29201-201ENSMUST00000189120 431 ntBASIC5.65□□□□□ -1.5
Lrif1Q8CDD9 Gm37430-201ENSMUST00000193039 196 ntBASIC5.65□□□□□ -1.5
Lrif1Q8CDD9 Gm29678-201ENSMUST00000193966 1134 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Lrif1Q8CDD9 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC5.65□□□□□ -1.5
Lrif1Q8CDD9 Gm3279-201ENSMUST00000203099 1092 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Lrif1Q8CDD9 1700048P04Rik-201ENSMUST00000219825 369 ntTSL 3 BASIC5.65□□□□□ -1.5
Lrif1Q8CDD9 AC159208.1-201ENSMUST00000221403 649 ntBASIC5.65□□□□□ -1.5
Lrif1Q8CDD9 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC5.65□□□□□ -1.5
Lrif1Q8CDD9 AC154718.1-201ENSMUST00000226676 250 ntBASIC5.65□□□□□ -1.5
Lrif1Q8CDD9 Gm8256-203ENSMUST00000228692 591 ntBASIC5.65□□□□□ -1.5
Lrif1Q8CDD9 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Lrif1Q8CDD9 Olfr684-201ENSMUST00000060893 939 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Lrif1Q8CDD9 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Lrif1Q8CDD9 Olfr467-201ENSMUST00000084756 927 ntBASIC5.65□□□□□ -1.5
Lrif1Q8CDD9 Gm44209-201ENSMUST00000204556 4153 ntBASIC5.65□□□□□ -1.51
Lrif1Q8CDD9 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Lrif1Q8CDD9 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Lrif1Q8CDD9 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Lrif1Q8CDD9 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Lrif1Q8CDD9 Gm38190-201ENSMUST00000192350 4755 ntBASIC5.65□□□□□ -1.51
Lrif1Q8CDD9 Gm37482-201ENSMUST00000194899 2791 ntBASIC5.65□□□□□ -1.51
Lrif1Q8CDD9 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Lrif1Q8CDD9 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Lrif1Q8CDD9 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
Lrif1Q8CDD9 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Lrif1Q8CDD9 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Lrif1Q8CDD9 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Lrif1Q8CDD9 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC5.64□□□□□ -1.51
Lrif1Q8CDD9 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC5.64□□□□□ -1.51
Lrif1Q8CDD9 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Lrif1Q8CDD9 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
Lrif1Q8CDD9 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Lrif1Q8CDD9 Gm8822-201ENSMUST00000118948 2347 ntBASIC5.64□□□□□ -1.51
Lrif1Q8CDD9 Olfr895-202ENSMUST00000212156 1558 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
Lrif1Q8CDD9 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Lrif1Q8CDD9 Olfr888-202ENSMUST00000211851 2930 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
Lrif1Q8CDD9 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Lrif1Q8CDD9 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Lrif1Q8CDD9 Tmsb15b1-201ENSMUST00000113071 439 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
Lrif1Q8CDD9 Gm15237-201ENSMUST00000122104 469 ntBASIC5.64□□□□□ -1.51
Lrif1Q8CDD9 Gm16125-201ENSMUST00000159003 339 ntBASIC5.64□□□□□ -1.51
Lrif1Q8CDD9 Srsx-201ENSMUST00000171714 1083 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Lrif1Q8CDD9 Gm15257-201ENSMUST00000177680 883 ntBASIC5.64□□□□□ -1.51
Lrif1Q8CDD9 Gm15252-201ENSMUST00000177750 883 ntBASIC5.64□□□□□ -1.51
Lrif1Q8CDD9 Gm15256-201ENSMUST00000177793 883 ntBASIC5.64□□□□□ -1.51
Lrif1Q8CDD9 Gm15260-201ENSMUST00000179402 883 ntBASIC5.64□□□□□ -1.51
Lrif1Q8CDD9 Gm28228-201ENSMUST00000186880 632 ntTSL 5 BASIC5.64□□□□□ -1.51
Lrif1Q8CDD9 Gm28149-201ENSMUST00000187102 378 ntBASIC5.64□□□□□ -1.51
Lrif1Q8CDD9 Eif4a2-224ENSMUST00000187168 1238 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Lrif1Q8CDD9 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC5.64□□□□□ -1.51
Lrif1Q8CDD9 Gm28066-201ENSMUST00000188657 472 ntBASIC5.64□□□□□ -1.51
Lrif1Q8CDD9 Gm28768-201ENSMUST00000189034 378 ntBASIC5.64□□□□□ -1.51
Lrif1Q8CDD9 Ighv8-5-201ENSMUST00000194257 358 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Lrif1Q8CDD9 Gm44312-201ENSMUST00000203536 469 ntBASIC5.64□□□□□ -1.51
Lrif1Q8CDD9 Gm44930-201ENSMUST00000207545 489 ntTSL 5 BASIC5.64□□□□□ -1.51
Lrif1Q8CDD9 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Lrif1Q8CDD9 AC156832.1-201ENSMUST00000217609 811 ntTSL 5 BASIC5.64□□□□□ -1.51
Lrif1Q8CDD9 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC5.64□□□□□ -1.51
Lrif1Q8CDD9 AC164426.1-201ENSMUST00000225745 929 ntBASIC5.64□□□□□ -1.51
Lrif1Q8CDD9 AC122459.2-201ENSMUST00000227099 638 ntBASIC5.64□□□□□ -1.51
Lrif1Q8CDD9 AC114572.1-201ENSMUST00000227262 300 ntBASIC5.64□□□□□ -1.51
Lrif1Q8CDD9 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Lrif1Q8CDD9 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC5.64□□□□□ -1.51
Lrif1Q8CDD9 Vmn1r234-201ENSMUST00000079633 990 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Lrif1Q8CDD9 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Lrif1Q8CDD9 Olfr313-201ENSMUST00000082220 1074 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Lrif1Q8CDD9 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Lrif1Q8CDD9 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Lrif1Q8CDD9 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Lrif1Q8CDD9 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Lrif1Q8CDD9 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Lrif1Q8CDD9 Gm14667-201ENSMUST00000119448 1350 ntBASIC5.64□□□□□ -1.51
Lrif1Q8CDD9 Gm19125-201ENSMUST00000188408 1383 ntBASIC5.64□□□□□ -1.51
Lrif1Q8CDD9 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Lrif1Q8CDD9 B130034C11Rik-201ENSMUST00000175717 1401 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Lrif1Q8CDD9 Hspa9-ps1-201ENSMUST00000119602 1933 ntBASIC5.64□□□□□ -1.51
Lrif1Q8CDD9 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC5.64□□□□□ -1.51
Lrif1Q8CDD9 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Lrif1Q8CDD9 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Lrif1Q8CDD9 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
Lrif1Q8CDD9 Asah2-201ENSMUST00000096119 4682 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Lrif1Q8CDD9 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC5.63□□□□□ -1.51
Lrif1Q8CDD9 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Lrif1Q8CDD9 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Lrif1Q8CDD9 AC154368.2-201ENSMUST00000222334 1724 ntBASIC5.63□□□□□ -1.51
Lrif1Q8CDD9 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Lrif1Q8CDD9 Gm18066-201ENSMUST00000210904 1774 ntBASIC5.63□□□□□ -1.51
Lrif1Q8CDD9 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Lrif1Q8CDD9 Gm37056-201ENSMUST00000192141 1865 ntBASIC5.63□□□□□ -1.51
Lrif1Q8CDD9 Mir290a-201ENSMUST00000104627 83 ntBASIC5.63□□□□□ -1.51
Lrif1Q8CDD9 Gm12643-201ENSMUST00000116078 374 ntBASIC5.63□□□□□ -1.51
Lrif1Q8CDD9 Gm11270-201ENSMUST00000117685 471 ntBASIC5.63□□□□□ -1.51
Lrif1Q8CDD9 Gm11699-201ENSMUST00000119016 401 ntBASIC5.63□□□□□ -1.51
Lrif1Q8CDD9 Gm12850-201ENSMUST00000119210 436 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms