Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
Col6a6Q8C6K9 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a6Q8C6K9 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Col6a6Q8C6K9 5031410I06Rik-201ENSMUST00000063524 2995 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a6Q8C6K9 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a6Q8C6K9 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC5.14□□□□□ -1.59
Col6a6Q8C6K9 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC5.14□□□□□ -1.59
Col6a6Q8C6K9 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a6Q8C6K9 Gm38070-201ENSMUST00000191850 6480 ntBASIC5.14□□□□□ -1.59
Col6a6Q8C6K9 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC5.14□□□□□ -1.59
Col6a6Q8C6K9 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a6Q8C6K9 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a6Q8C6K9 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a6Q8C6K9 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a6Q8C6K9 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Col6a6Q8C6K9 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a6Q8C6K9 Gm37875-201ENSMUST00000192101 1498 ntTSL 5 BASIC5.14□□□□□ -1.59
Col6a6Q8C6K9 Olfr734-203ENSMUST00000217152 4416 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Col6a6Q8C6K9 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
Col6a6Q8C6K9 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Col6a6Q8C6K9 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Col6a6Q8C6K9 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC5.13□□□□□ -1.59
Col6a6Q8C6K9 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC5.13□□□□□ -1.59
Col6a6Q8C6K9 Tmem232-202ENSMUST00000086722 2588 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col6a6Q8C6K9 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC5.13□□□□□ -1.59
Col6a6Q8C6K9 n-R5s82-201ENSMUST00000104213 109 ntBASIC5.13□□□□□ -1.59
Col6a6Q8C6K9 Gm13770-201ENSMUST00000117149 305 ntBASIC5.13□□□□□ -1.59
Col6a6Q8C6K9 Gm5387-201ENSMUST00000119776 857 ntBASIC5.13□□□□□ -1.59
Col6a6Q8C6K9 Gm13488-201ENSMUST00000120419 179 ntBASIC5.13□□□□□ -1.59
Col6a6Q8C6K9 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC5.13□□□□□ -1.59
Col6a6Q8C6K9 Gm13077-201ENSMUST00000121941 484 ntBASIC5.13□□□□□ -1.59
Col6a6Q8C6K9 Gm3242-201ENSMUST00000171273 485 ntBASIC5.13□□□□□ -1.59
Col6a6Q8C6K9 Gm27820-201ENSMUST00000183628 175 ntBASIC5.13□□□□□ -1.59
Col6a6Q8C6K9 Gm43712-201ENSMUST00000198020 291 ntBASIC5.13□□□□□ -1.59
Col6a6Q8C6K9 Gm18468-201ENSMUST00000207321 369 ntBASIC5.13□□□□□ -1.59
Col6a6Q8C6K9 Gm18470-201ENSMUST00000207467 420 ntBASIC5.13□□□□□ -1.59
Col6a6Q8C6K9 Gm18465-201ENSMUST00000207468 369 ntBASIC5.13□□□□□ -1.59
Col6a6Q8C6K9 Gm18464-201ENSMUST00000207803 420 ntBASIC5.13□□□□□ -1.59
Col6a6Q8C6K9 Gm18458-201ENSMUST00000207908 369 ntBASIC5.13□□□□□ -1.59
Col6a6Q8C6K9 Gm18461-201ENSMUST00000208421 420 ntBASIC5.13□□□□□ -1.59
Col6a6Q8C6K9 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC5.13□□□□□ -1.59
Col6a6Q8C6K9 1700129C05Rik-201ENSMUST00000022548 1067 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col6a6Q8C6K9 Gm23624-201ENSMUST00000082463 321 ntBASIC5.13□□□□□ -1.59
Col6a6Q8C6K9 Gm23459-201ENSMUST00000083259 131 ntBASIC5.13□□□□□ -1.59
Col6a6Q8C6K9 Gm43503-201ENSMUST00000200033 3408 ntBASIC5.13□□□□□ -1.59
Col6a6Q8C6K9 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Col6a6Q8C6K9 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col6a6Q8C6K9 Spata31d1d-201ENSMUST00000052978 3827 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
Col6a6Q8C6K9 Gm37773-201ENSMUST00000194141 2120 ntBASIC5.13□□□□□ -1.59
Col6a6Q8C6K9 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col6a6Q8C6K9 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col6a6Q8C6K9 Fam26d-202ENSMUST00000218239 3075 ntBASIC5.13□□□□□ -1.59
Col6a6Q8C6K9 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Col6a6Q8C6K9 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Col6a6Q8C6K9 Dock7-214ENSMUST00000205650 6297 ntAPPRIS P3 TSL 5 BASIC5.13□□□□□ -1.59
Col6a6Q8C6K9 Gm19667-201ENSMUST00000188984 3334 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Col6a6Q8C6K9 AC107453.1-201ENSMUST00000227490 3268 ntBASIC5.13□□□□□ -1.59
Col6a6Q8C6K9 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
Col6a6Q8C6K9 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Col6a6Q8C6K9 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC5.13□□□□□ -1.59
Col6a6Q8C6K9 Gm24855-201ENSMUST00000104848 97 ntBASIC5.13□□□□□ -1.59
Col6a6Q8C6K9 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC5.13□□□□□ -1.59
Col6a6Q8C6K9 Gm4234-201ENSMUST00000119747 714 ntBASIC5.13□□□□□ -1.59
Col6a6Q8C6K9 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Col6a6Q8C6K9 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC5.13□□□□□ -1.59
Col6a6Q8C6K9 Olfr720-201ENSMUST00000035250 1023 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Col6a6Q8C6K9 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col6a6Q8C6K9 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col6a6Q8C6K9 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Col6a6Q8C6K9 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col6a6Q8C6K9 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col6a6Q8C6K9 Stat4-202ENSMUST00000168302 2662 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col6a6Q8C6K9 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
Col6a6Q8C6K9 Pln-206ENSMUST00000220197 1854 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Col6a6Q8C6K9 Gm37310-201ENSMUST00000195237 2968 ntBASIC5.13□□□□□ -1.59
Col6a6Q8C6K9 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col6a6Q8C6K9 Gm5925-201ENSMUST00000105016 1497 ntBASIC5.13□□□□□ -1.59
Col6a6Q8C6K9 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC5.13□□□□□ -1.59
Col6a6Q8C6K9 Gm38224-201ENSMUST00000191648 2100 ntBASIC5.12□□□□□ -1.59
Col6a6Q8C6K9 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Col6a6Q8C6K9 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
Col6a6Q8C6K9 Gm37760-201ENSMUST00000194726 3841 ntBASIC5.12□□□□□ -1.59
Col6a6Q8C6K9 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Col6a6Q8C6K9 Iars-202ENSMUST00000164260 3789 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Col6a6Q8C6K9 Gm44697-201ENSMUST00000207756 1679 ntBASIC5.12□□□□□ -1.59
Col6a6Q8C6K9 Gm37077-201ENSMUST00000195723 3691 ntBASIC5.12□□□□□ -1.59
Col6a6Q8C6K9 Elovl6-201ENSMUST00000071402 5951 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Col6a6Q8C6K9 Gm11975-201ENSMUST00000118772 481 ntBASIC5.12□□□□□ -1.59
Col6a6Q8C6K9 Gm14485-201ENSMUST00000119489 493 ntBASIC5.12□□□□□ -1.59
Col6a6Q8C6K9 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC5.12□□□□□ -1.59
Col6a6Q8C6K9 Gm22411-201ENSMUST00000175462 126 ntBASIC5.12□□□□□ -1.59
Col6a6Q8C6K9 Gm22002-201ENSMUST00000175622 125 ntBASIC5.12□□□□□ -1.59
Col6a6Q8C6K9 Mir6539-201ENSMUST00000183732 110 ntBASIC5.12□□□□□ -1.59
Col6a6Q8C6K9 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC5.12□□□□□ -1.59
Col6a6Q8C6K9 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Col6a6Q8C6K9 Glud-ps-201ENSMUST00000206310 657 ntBASIC5.12□□□□□ -1.59
Col6a6Q8C6K9 AC132384.8-201ENSMUST00000218152 1204 ntBASIC5.12□□□□□ -1.59
Col6a6Q8C6K9 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC5.12□□□□□ -1.59
Col6a6Q8C6K9 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Col6a6Q8C6K9 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms