Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC8.78□□□□□ -1
Trim35Q8C006 Gm26929-201ENSMUST00000182703 753 ntBASIC8.78□□□□□ -1
Trim35Q8C006 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC8.78□□□□□ -1
Trim35Q8C006 Gm37942-201ENSMUST00000191875 628 ntBASIC8.78□□□□□ -1
Trim35Q8C006 Gm37619-201ENSMUST00000193219 724 ntBASIC8.78□□□□□ -1
Trim35Q8C006 Gm18553-201ENSMUST00000194152 634 ntBASIC8.78□□□□□ -1
Trim35Q8C006 Kcnk2-208ENSMUST00000194172 1200 ntTSL 5 BASIC8.78□□□□□ -1
Trim35Q8C006 Cdk2ap1-205ENSMUST00000196910 483 ntAPPRIS ALT1 TSL 2 BASIC8.78□□□□□ -1
Trim35Q8C006 Gm10046-202ENSMUST00000208942 126 ntBASIC8.78□□□□□ -1
Trim35Q8C006 Chmp2a-204ENSMUST00000211344 606 ntTSL 5 BASIC8.78□□□□□ -1
Trim35Q8C006 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC8.78□□□□□ -1
Trim35Q8C006 Pafah1b2-203ENSMUST00000214179 794 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
Trim35Q8C006 CT954323.1-201ENSMUST00000222774 229 ntBASIC8.78□□□□□ -1
Trim35Q8C006 Gm8278-201ENSMUST00000222840 1121 ntBASIC8.78□□□□□ -1
Trim35Q8C006 AC126275.2-201ENSMUST00000225224 253 ntBASIC8.78□□□□□ -1
Trim35Q8C006 Gm5815-201ENSMUST00000050706 1185 ntBASIC8.78□□□□□ -1
Trim35Q8C006 n-R5s95-201ENSMUST00000082684 118 ntBASIC8.78□□□□□ -1
Trim35Q8C006 Gbp8-202ENSMUST00000112718 1600 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trim35Q8C006 2610028H24Rik-201ENSMUST00000092406 1640 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Trim35Q8C006 Gm44704-201ENSMUST00000208963 1990 ntBASIC8.78□□□□□ -1
Trim35Q8C006 Smyd1-201ENSMUST00000074301 3361 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trim35Q8C006 Prdm15-203ENSMUST00000121584 6194 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Trim35Q8C006 Scn2b-201ENSMUST00000093855 3958 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
Trim35Q8C006 Gm5315-201ENSMUST00000204430 1897 ntBASIC8.78□□□□□ -1
Trim35Q8C006 Arsj-201ENSMUST00000093976 3859 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trim35Q8C006 4930402H05Rik-201ENSMUST00000203115 2829 ntBASIC8.78□□□□□ -1
Trim35Q8C006 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC8.78□□□□□ -1
Trim35Q8C006 Efcab1-201ENSMUST00000090277 2494 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trim35Q8C006 Erg-204ENSMUST00000118113 3062 ntTSL 1 (best) BASIC8.78□□□□□ -1
Trim35Q8C006 Gm3138-201ENSMUST00000165431 1760 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Trim35Q8C006 Gm43504-201ENSMUST00000196056 2038 ntBASIC8.78□□□□□ -1
Trim35Q8C006 Gtf2a1-201ENSMUST00000021345 6064 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trim35Q8C006 C130071C03Rik-201ENSMUST00000131907 3590 ntTSL 1 (best) BASIC8.78□□□□□ -1
Trim35Q8C006 Enpp3-203ENSMUST00000218044 1346 ntTSL 1 (best) BASIC8.78□□□□□ -1
Trim35Q8C006 Pla2g4c-203ENSMUST00000108528 3390 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Trim35Q8C006 BC025920-203ENSMUST00000119753 1582 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trim35Q8C006 Gm44883-201ENSMUST00000206063 3258 ntBASIC8.78□□□□□ -1
Trim35Q8C006 Numb-201ENSMUST00000021647 1815 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1
Trim35Q8C006 Zzz3-202ENSMUST00000106100 7607 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1
Trim35Q8C006 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1
Trim35Q8C006 Dclk1-212ENSMUST00000199585 5196 ntTSL 1 (best) BASIC8.77□□□□□ -1
Trim35Q8C006 Unc5c-204ENSMUST00000130636 3595 ntTSL 1 (best) BASIC8.77□□□□□ -1
Trim35Q8C006 Chrna2-201ENSMUST00000022620 3554 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Trim35Q8C006 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC8.77□□□□□ -1
Trim35Q8C006 Nlgn3-202ENSMUST00000118111 8004 ntTSL 5 BASIC8.77□□□□□ -1
Trim35Q8C006 4933406C10Rik-202ENSMUST00000181670 1633 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Trim35Q8C006 Havcr1-201ENSMUST00000047568 1892 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trim35Q8C006 9530053A07Rik-201ENSMUST00000059886 7922 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Trim35Q8C006 Atxn7l1-210ENSMUST00000144586 3042 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Trim35Q8C006 Asns-201ENSMUST00000031766 2001 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trim35Q8C006 Havcr1-202ENSMUST00000081819 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trim35Q8C006 Mro-201ENSMUST00000119239 1772 ntAPPRIS P3 TSL 5 BASIC8.77□□□□□ -1.01
Trim35Q8C006 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Trim35Q8C006 Golga3-201ENSMUST00000031477 4805 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
Trim35Q8C006 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Trim35Q8C006 Gm23705-201ENSMUST00000104370 130 ntBASIC8.77□□□□□ -1.01
Trim35Q8C006 Gm14744-201ENSMUST00000114039 800 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trim35Q8C006 Gm23368-201ENSMUST00000116939 96 ntBASIC8.77□□□□□ -1.01
Trim35Q8C006 Gm23841-201ENSMUST00000116951 114 ntBASIC8.77□□□□□ -1.01
Trim35Q8C006 Gm12230-201ENSMUST00000118301 454 ntBASIC8.77□□□□□ -1.01
Trim35Q8C006 Gm14787-201ENSMUST00000121236 388 ntBASIC8.77□□□□□ -1.01
Trim35Q8C006 Olfr408-ps1-201ENSMUST00000121710 941 ntBASIC8.77□□□□□ -1.01
Trim35Q8C006 Gm22026-201ENSMUST00000122735 281 ntBASIC8.77□□□□□ -1.01
Trim35Q8C006 Gm13134-201ENSMUST00000132106 738 ntTSL 3 BASIC8.77□□□□□ -1.01
Trim35Q8C006 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC8.77□□□□□ -1.01
Trim35Q8C006 Gm44641-201ENSMUST00000152342 323 ntTSL 3 BASIC8.77□□□□□ -1.01
Trim35Q8C006 Gm8964-201ENSMUST00000165944 805 ntBASIC8.77□□□□□ -1.01
Trim35Q8C006 Gm26400-201ENSMUST00000175012 85 ntBASIC8.77□□□□□ -1.01
Trim35Q8C006 Gm14527-201ENSMUST00000179300 639 ntBASIC8.77□□□□□ -1.01
Trim35Q8C006 Gm3591-202ENSMUST00000179312 396 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trim35Q8C006 Gm28283-201ENSMUST00000185509 178 ntBASIC8.77□□□□□ -1.01
Trim35Q8C006 Gm29468-201ENSMUST00000185978 696 ntBASIC8.77□□□□□ -1.01
Trim35Q8C006 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC8.77□□□□□ -1.01
Trim35Q8C006 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC8.77□□□□□ -1.01
Trim35Q8C006 Lax1-202ENSMUST00000189524 628 ntTSL 2 BASIC8.77□□□□□ -1.01
Trim35Q8C006 Spata45-202ENSMUST00000192151 443 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Trim35Q8C006 Gm3321-201ENSMUST00000200603 1129 ntBASIC8.77□□□□□ -1.01
Trim35Q8C006 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC8.77□□□□□ -1.01
Trim35Q8C006 Gm44767-201ENSMUST00000206634 469 ntTSL 5 BASIC8.77□□□□□ -1.01
Trim35Q8C006 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC8.77□□□□□ -1.01
Trim35Q8C006 Gm45789-201ENSMUST00000213038 364 ntBASIC8.77□□□□□ -1.01
Trim35Q8C006 4933404K13Rik-203ENSMUST00000217125 1060 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Trim35Q8C006 AC122188.1-201ENSMUST00000217534 312 ntBASIC8.77□□□□□ -1.01
Trim35Q8C006 Gm29884-201ENSMUST00000218403 453 ntBASIC8.77□□□□□ -1.01
Trim35Q8C006 AC159282.1-206ENSMUST00000219268 708 ntTSL 3 BASIC8.77□□□□□ -1.01
Trim35Q8C006 Gm9158-201ENSMUST00000222116 582 ntBASIC8.77□□□□□ -1.01
Trim35Q8C006 Cthrc1-204ENSMUST00000226433 596 ntBASIC8.77□□□□□ -1.01
Trim35Q8C006 CT030732.1-201ENSMUST00000226885 246 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Trim35Q8C006 Clpsl2-201ENSMUST00000025061 442 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trim35Q8C006 Gm23037-201ENSMUST00000083874 324 ntBASIC8.77□□□□□ -1.01
Trim35Q8C006 Gm826-201ENSMUST00000099127 637 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trim35Q8C006 Musk-201ENSMUST00000081919 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trim35Q8C006 Gsdmc2-203ENSMUST00000188691 2162 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trim35Q8C006 Ces3a-202ENSMUST00000093223 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trim35Q8C006 EPPK1-201ENSMUST00000226781 12325 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Trim35Q8C006 Ccr4-201ENSMUST00000054414 2805 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trim35Q8C006 Trps1-206ENSMUST00000184458 5293 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trim35Q8C006 Pdik1l-202ENSMUST00000105876 4509 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trim35Q8C006 Gm37949-201ENSMUST00000192808 2091 ntBASIC8.77□□□□□ -1.01
Trim35Q8C006 Nbr1-204ENSMUST00000107208 4344 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms