Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Ccdc40Q8BI79 Gm12643-201ENSMUST00000116078 374 ntBASIC6.1□□□□□ -1.43
Ccdc40Q8BI79 Gm7927-201ENSMUST00000118818 880 ntBASIC6.1□□□□□ -1.43
Ccdc40Q8BI79 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC6.1□□□□□ -1.43
Ccdc40Q8BI79 Gm15840-201ENSMUST00000122099 943 ntBASIC6.1□□□□□ -1.43
Ccdc40Q8BI79 Gm12440-201ENSMUST00000155224 1070 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Ccdc40Q8BI79 4930445N08Rik-201ENSMUST00000156925 313 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Ccdc40Q8BI79 Gm24767-201ENSMUST00000158509 95 ntBASIC6.1□□□□□ -1.43
Ccdc40Q8BI79 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Ccdc40Q8BI79 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC6.1□□□□□ -1.43
Ccdc40Q8BI79 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Ccdc40Q8BI79 Gm26653-201ENSMUST00000181537 1214 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Ccdc40Q8BI79 Gm29234-201ENSMUST00000187452 1262 ntBASIC6.1□□□□□ -1.43
Ccdc40Q8BI79 Gm18407-201ENSMUST00000192126 790 ntBASIC6.1□□□□□ -1.43
Ccdc40Q8BI79 Gm43772-201ENSMUST00000202052 379 ntBASIC6.1□□□□□ -1.43
Ccdc40Q8BI79 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Ccdc40Q8BI79 Olfr162-ps1-201ENSMUST00000206015 934 ntBASIC6.1□□□□□ -1.43
Ccdc40Q8BI79 AC129323.1-201ENSMUST00000216733 470 ntBASIC6.1□□□□□ -1.43
Ccdc40Q8BI79 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Ccdc40Q8BI79 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC6.1□□□□□ -1.43
Ccdc40Q8BI79 Gm18405-201ENSMUST00000220743 511 ntBASIC6.1□□□□□ -1.43
Ccdc40Q8BI79 AC124537.2-201ENSMUST00000220872 883 ntTSL 5 BASIC6.1□□□□□ -1.43
Ccdc40Q8BI79 Olfr1431-201ENSMUST00000072316 939 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Ccdc40Q8BI79 Gm22351-201ENSMUST00000083925 107 ntBASIC6.1□□□□□ -1.43
Ccdc40Q8BI79 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC6.1□□□□□ -1.43
Ccdc40Q8BI79 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Ccdc40Q8BI79 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Ccdc40Q8BI79 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC6.1□□□□□ -1.43
Ccdc40Q8BI79 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Ccdc40Q8BI79 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Ccdc40Q8BI79 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC6.1□□□□□ -1.43
Ccdc40Q8BI79 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Ccdc40Q8BI79 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Ccdc40Q8BI79 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Ccdc40Q8BI79 Gm45415-201ENSMUST00000209644 2074 ntBASIC6.1□□□□□ -1.43
Ccdc40Q8BI79 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Ccdc40Q8BI79 Gm38036-201ENSMUST00000194586 3564 ntBASIC6.1□□□□□ -1.43
Ccdc40Q8BI79 Gm42827-201ENSMUST00000197058 1515 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Ccdc40Q8BI79 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Ccdc40Q8BI79 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Ccdc40Q8BI79 Gm37289-201ENSMUST00000195409 1402 ntBASIC6.09□□□□□ -1.43
Ccdc40Q8BI79 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Ccdc40Q8BI79 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Ccdc40Q8BI79 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Ccdc40Q8BI79 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Ccdc40Q8BI79 AC122408.2-201ENSMUST00000217901 1391 ntBASIC6.09□□□□□ -1.43
Ccdc40Q8BI79 Gm43319-201ENSMUST00000198036 2270 ntBASIC6.09□□□□□ -1.43
Ccdc40Q8BI79 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Ccdc40Q8BI79 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC6.09□□□□□ -1.43
Ccdc40Q8BI79 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Ccdc40Q8BI79 Ranbp3l-201ENSMUST00000053308 3017 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Ccdc40Q8BI79 Gm42873-201ENSMUST00000196110 1726 ntBASIC6.09□□□□□ -1.43
Ccdc40Q8BI79 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Ccdc40Q8BI79 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Ccdc40Q8BI79 Mir466i-201ENSMUST00000116924 121 ntBASIC6.09□□□□□ -1.43
Ccdc40Q8BI79 Gm11624-201ENSMUST00000118579 1041 ntBASIC6.09□□□□□ -1.43
Ccdc40Q8BI79 Gm6744-201ENSMUST00000119303 543 ntBASIC6.09□□□□□ -1.43
Ccdc40Q8BI79 Gm14375-201ENSMUST00000119490 855 ntBASIC6.09□□□□□ -1.43
Ccdc40Q8BI79 Gm7571-201ENSMUST00000120252 927 ntBASIC6.09□□□□□ -1.43
Ccdc40Q8BI79 Gm9208-201ENSMUST00000120468 948 ntBASIC6.09□□□□□ -1.43
Ccdc40Q8BI79 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Ccdc40Q8BI79 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Ccdc40Q8BI79 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC6.09□□□□□ -1.43
Ccdc40Q8BI79 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC6.09□□□□□ -1.43
Ccdc40Q8BI79 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC6.09□□□□□ -1.43
Ccdc40Q8BI79 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC6.09□□□□□ -1.43
Ccdc40Q8BI79 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC6.09□□□□□ -1.43
Ccdc40Q8BI79 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC6.09□□□□□ -1.43
Ccdc40Q8BI79 Gm37196-201ENSMUST00000194762 906 ntBASIC6.09□□□□□ -1.43
Ccdc40Q8BI79 Gm43467-201ENSMUST00000197441 437 ntBASIC6.09□□□□□ -1.43
Ccdc40Q8BI79 Gm29736-201ENSMUST00000198189 385 ntBASIC6.09□□□□□ -1.43
Ccdc40Q8BI79 Gm44053-201ENSMUST00000203364 929 ntBASIC6.09□□□□□ -1.43
Ccdc40Q8BI79 Smarca2-231ENSMUST00000208091 1140 ntTSL 5 BASIC6.09□□□□□ -1.43
Ccdc40Q8BI79 Gm4587-201ENSMUST00000209135 637 ntBASIC6.09□□□□□ -1.43
Ccdc40Q8BI79 AC153821.1-201ENSMUST00000217893 581 ntTSL 2 BASIC6.09□□□□□ -1.43
Ccdc40Q8BI79 AC163651.2-202ENSMUST00000222628 1192 ntTSL 5 BASIC6.09□□□□□ -1.43
Ccdc40Q8BI79 Gm8288-201ENSMUST00000223406 593 ntBASIC6.09□□□□□ -1.43
Ccdc40Q8BI79 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC6.09□□□□□ -1.43
Ccdc40Q8BI79 AC133203.1-201ENSMUST00000228241 301 ntBASIC6.09□□□□□ -1.43
Ccdc40Q8BI79 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Ccdc40Q8BI79 Gm8412-201ENSMUST00000077493 440 ntBASIC6.09□□□□□ -1.43
Ccdc40Q8BI79 Gm26226-201ENSMUST00000082509 116 ntBASIC6.09□□□□□ -1.43
Ccdc40Q8BI79 Vmn1r168-201ENSMUST00000098704 930 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Ccdc40Q8BI79 Olfr1312-201ENSMUST00000099600 954 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Ccdc40Q8BI79 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC6.09□□□□□ -1.43
Ccdc40Q8BI79 Olfr1268-ps1-201ENSMUST00000117787 2501 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Ccdc40Q8BI79 Kat6b-ps2-201ENSMUST00000188339 1600 ntBASIC6.09□□□□□ -1.43
Ccdc40Q8BI79 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Ccdc40Q8BI79 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Ccdc40Q8BI79 Dnah3-204ENSMUST00000209154 12265 ntAPPRIS P5 TSL 5 BASIC6.09□□□□□ -1.44
Ccdc40Q8BI79 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Ccdc40Q8BI79 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Ccdc40Q8BI79 Gm13712-201ENSMUST00000117484 2295 ntBASIC6.09□□□□□ -1.44
Ccdc40Q8BI79 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Ccdc40Q8BI79 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC6.09□□□□□ -1.44
Ccdc40Q8BI79 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.44
Ccdc40Q8BI79 Gm43831-201ENSMUST00000200461 2598 ntBASIC6.09□□□□□ -1.44
Ccdc40Q8BI79 D5Ertd577e-201ENSMUST00000094593 2462 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ccdc40Q8BI79 Gm43085-201ENSMUST00000202859 3132 ntBASIC6.08□□□□□ -1.44
Ccdc40Q8BI79 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 113.4 ms