Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 E430021H15Rik-201ENSMUST00000198875 3459 ntBASIC6.1□□□□□ -1.43
Upf3bQ3ULL6 CT025686.2-201ENSMUST00000227898 3315 ntBASIC6.1□□□□□ -1.43
Upf3bQ3ULL6 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Upf3bQ3ULL6 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Upf3bQ3ULL6 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC6.1□□□□□ -1.43
Upf3bQ3ULL6 Gm37773-201ENSMUST00000194141 2120 ntBASIC6.1□□□□□ -1.43
Upf3bQ3ULL6 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Upf3bQ3ULL6 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Upf3bQ3ULL6 Olfr745-202ENSMUST00000213127 1930 ntTSL 5 BASIC6.09□□□□□ -1.43
Upf3bQ3ULL6 Gm43360-201ENSMUST00000197656 2887 ntBASIC6.09□□□□□ -1.43
Upf3bQ3ULL6 Gm37087-201ENSMUST00000192966 3309 ntBASIC6.09□□□□□ -1.43
Upf3bQ3ULL6 Gm37752-201ENSMUST00000193494 3309 ntBASIC6.09□□□□□ -1.43
Upf3bQ3ULL6 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Upf3bQ3ULL6 Gm43025-201ENSMUST00000201764 1886 ntBASIC6.09□□□□□ -1.43
Upf3bQ3ULL6 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Upf3bQ3ULL6 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Upf3bQ3ULL6 AC156031.1-201ENSMUST00000217288 2555 ntBASIC6.09□□□□□ -1.43
Upf3bQ3ULL6 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Upf3bQ3ULL6 Magea6-202ENSMUST00000112562 1212 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Upf3bQ3ULL6 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC6.09□□□□□ -1.43
Upf3bQ3ULL6 Gm15048-201ENSMUST00000118201 954 ntBASIC6.09□□□□□ -1.43
Upf3bQ3ULL6 Gm13473-201ENSMUST00000119289 367 ntBASIC6.09□□□□□ -1.43
Upf3bQ3ULL6 Gm6884-201ENSMUST00000119318 615 ntBASIC6.09□□□□□ -1.43
Upf3bQ3ULL6 Gm15959-201ENSMUST00000121724 368 ntBASIC6.09□□□□□ -1.43
Upf3bQ3ULL6 Gm22959-201ENSMUST00000122514 303 ntBASIC6.09□□□□□ -1.43
Upf3bQ3ULL6 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Upf3bQ3ULL6 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
Upf3bQ3ULL6 Gm4832-201ENSMUST00000182679 399 ntBASIC6.09□□□□□ -1.43
Upf3bQ3ULL6 Gm29592-201ENSMUST00000189434 370 ntBASIC6.09□□□□□ -1.43
Upf3bQ3ULL6 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Upf3bQ3ULL6 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC6.09□□□□□ -1.43
Upf3bQ3ULL6 Gm4510-201ENSMUST00000218265 427 ntBASIC6.09□□□□□ -1.43
Upf3bQ3ULL6 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Upf3bQ3ULL6 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC6.09□□□□□ -1.43
Upf3bQ3ULL6 AC160105.1-201ENSMUST00000221931 682 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Upf3bQ3ULL6 AC168056.2-201ENSMUST00000223591 269 ntBASIC6.09□□□□□ -1.43
Upf3bQ3ULL6 AC117797.1-201ENSMUST00000223977 695 ntBASIC6.09□□□□□ -1.43
Upf3bQ3ULL6 AC125405.1-201ENSMUST00000226406 589 ntBASIC6.09□□□□□ -1.43
Upf3bQ3ULL6 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Upf3bQ3ULL6 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Upf3bQ3ULL6 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC6.09□□□□□ -1.43
Upf3bQ3ULL6 Gm37959-201ENSMUST00000191700 2897 ntBASIC6.09□□□□□ -1.43
Upf3bQ3ULL6 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Upf3bQ3ULL6 Olfr446-202ENSMUST00000215369 4399 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Upf3bQ3ULL6 Gm44901-201ENSMUST00000208157 3977 ntBASIC6.09□□□□□ -1.43
Upf3bQ3ULL6 Gm38036-201ENSMUST00000194586 3564 ntBASIC6.09□□□□□ -1.43
Upf3bQ3ULL6 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Upf3bQ3ULL6 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Upf3bQ3ULL6 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
Upf3bQ3ULL6 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Upf3bQ3ULL6 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Upf3bQ3ULL6 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.44
Upf3bQ3ULL6 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Upf3bQ3ULL6 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Upf3bQ3ULL6 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.44
Upf3bQ3ULL6 Gm37249-201ENSMUST00000195185 2869 ntBASIC6.08□□□□□ -1.44
Upf3bQ3ULL6 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Upf3bQ3ULL6 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC6.08□□□□□ -1.44
Upf3bQ3ULL6 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Upf3bQ3ULL6 Olfr705-203ENSMUST00000216009 3085 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Upf3bQ3ULL6 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Upf3bQ3ULL6 Gm37686-201ENSMUST00000194099 2309 ntBASIC6.08□□□□□ -1.44
Upf3bQ3ULL6 Gm43062-201ENSMUST00000196302 1319 ntBASIC6.08□□□□□ -1.44
Upf3bQ3ULL6 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Upf3bQ3ULL6 Sub1-202ENSMUST00000110504 675 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Upf3bQ3ULL6 Gm12244-201ENSMUST00000119500 291 ntBASIC6.08□□□□□ -1.44
Upf3bQ3ULL6 Gm14267-201ENSMUST00000119751 496 ntBASIC6.08□□□□□ -1.44
Upf3bQ3ULL6 Gm11533-201ENSMUST00000120287 477 ntBASIC6.08□□□□□ -1.44
Upf3bQ3ULL6 Gm25445-201ENSMUST00000158996 299 ntBASIC6.08□□□□□ -1.44
Upf3bQ3ULL6 Gm16557-201ENSMUST00000159182 191 ntBASIC6.08□□□□□ -1.44
Upf3bQ3ULL6 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Upf3bQ3ULL6 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC6.08□□□□□ -1.44
Upf3bQ3ULL6 Gm29489-201ENSMUST00000188934 324 ntBASIC6.08□□□□□ -1.44
Upf3bQ3ULL6 Gm37235-201ENSMUST00000195171 59 ntBASIC6.08□□□□□ -1.44
Upf3bQ3ULL6 Gm42461-201ENSMUST00000198627 1150 ntBASIC6.08□□□□□ -1.44
Upf3bQ3ULL6 Gm19060-201ENSMUST00000201959 421 ntBASIC6.08□□□□□ -1.44
Upf3bQ3ULL6 Gm10709-201ENSMUST00000213318 480 ntBASIC6.08□□□□□ -1.44
Upf3bQ3ULL6 Gm31904-201ENSMUST00000219446 877 ntTSL 5 BASIC6.08□□□□□ -1.44
Upf3bQ3ULL6 Vmn1r70-201ENSMUST00000055847 897 ntAPPRIS P2 BASIC6.08□□□□□ -1.44
Upf3bQ3ULL6 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Upf3bQ3ULL6 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Upf3bQ3ULL6 Gm23686-201ENSMUST00000083241 164 ntBASIC6.08□□□□□ -1.44
Upf3bQ3ULL6 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Upf3bQ3ULL6 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Upf3bQ3ULL6 Gm44660-201ENSMUST00000207134 2465 ntBASIC6.08□□□□□ -1.44
Upf3bQ3ULL6 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Upf3bQ3ULL6 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC6.08□□□□□ -1.44
Upf3bQ3ULL6 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Upf3bQ3ULL6 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC6.08□□□□□ -1.44
Upf3bQ3ULL6 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Upf3bQ3ULL6 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Upf3bQ3ULL6 Olfr380-202ENSMUST00000121209 1669 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
Upf3bQ3ULL6 CT009480.3-201ENSMUST00000224051 3032 ntBASIC6.07□□□□□ -1.44
Upf3bQ3ULL6 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Upf3bQ3ULL6 Zfp26-203ENSMUST00000159569 11276 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Upf3bQ3ULL6 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC6.07□□□□□ -1.44
Upf3bQ3ULL6 Gm6427-201ENSMUST00000118721 979 ntBASIC6.07□□□□□ -1.44
Upf3bQ3ULL6 Olfr590-ps1-201ENSMUST00000118801 898 ntBASIC6.07□□□□□ -1.44
Upf3bQ3ULL6 Olfr1376-ps1-201ENSMUST00000121306 955 ntBASIC6.07□□□□□ -1.44
Upf3bQ3ULL6 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms