Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 AC161383.1-201ENSMUST00000227356 527 ntBASIC5.36□□□□□ -1.55
Scn1bP97952 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Scn1bP97952 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Scn1bP97952 Gm22300-201ENSMUST00000082661 126 ntBASIC5.36□□□□□ -1.55
Scn1bP97952 Mup13-202ENSMUST00000098042 984 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
Scn1bP97952 Olfr716-201ENSMUST00000098137 1104 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Scn1bP97952 Olfr548-ps1-201ENSMUST00000098228 933 ntBASIC5.36□□□□□ -1.55
Scn1bP97952 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Scn1bP97952 Olfr1160-201ENSMUST00000099839 960 ntBASIC5.36□□□□□ -1.55
Scn1bP97952 Ankrd12-201ENSMUST00000038116 8991 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Scn1bP97952 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC5.36□□□□□ -1.55
Scn1bP97952 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Scn1bP97952 AC121942.1-201ENSMUST00000224459 2891 ntBASIC5.36□□□□□ -1.55
Scn1bP97952 Olfr259-202ENSMUST00000213978 4046 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Scn1bP97952 Olfr259-204ENSMUST00000216088 4023 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
Scn1bP97952 Gm42686-201ENSMUST00000199172 4108 ntBASIC5.36□□□□□ -1.55
Scn1bP97952 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Scn1bP97952 AC112972.2-201ENSMUST00000228702 2210 ntBASIC5.35□□□□□ -1.55
Scn1bP97952 Olfr947-ps1-202ENSMUST00000214936 2168 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
Scn1bP97952 Gm13119-201ENSMUST00000094526 2094 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Scn1bP97952 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Scn1bP97952 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Scn1bP97952 Gm15789-201ENSMUST00000118992 1359 ntBASIC5.35□□□□□ -1.55
Scn1bP97952 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC5.35□□□□□ -1.55
Scn1bP97952 Olfr145-201ENSMUST00000086062 6796 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Scn1bP97952 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Scn1bP97952 Mir683-2-201ENSMUST00000102099 109 ntBASIC5.35□□□□□ -1.55
Scn1bP97952 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
Scn1bP97952 Gm14563-201ENSMUST00000120571 354 ntBASIC5.35□□□□□ -1.55
Scn1bP97952 Gm11369-201ENSMUST00000120812 318 ntBASIC5.35□□□□□ -1.55
Scn1bP97952 Gm12929-201ENSMUST00000122406 370 ntBASIC5.35□□□□□ -1.55
Scn1bP97952 Gm8648-201ENSMUST00000122457 221 ntBASIC5.35□□□□□ -1.55
Scn1bP97952 Gm14092-201ENSMUST00000136794 617 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Scn1bP97952 Gm13982-201ENSMUST00000138372 755 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Scn1bP97952 Gm7613-201ENSMUST00000139070 487 ntBASIC5.35□□□□□ -1.55
Scn1bP97952 Cav1-209ENSMUST00000150901 380 ntTSL 2 BASIC5.35□□□□□ -1.55
Scn1bP97952 Gm25281-201ENSMUST00000157270 104 ntBASIC5.35□□□□□ -1.55
Scn1bP97952 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Scn1bP97952 Gm25675-201ENSMUST00000174979 118 ntBASIC5.35□□□□□ -1.55
Scn1bP97952 Vmn1r-ps148-201ENSMUST00000176775 455 ntBASIC5.35□□□□□ -1.55
Scn1bP97952 Mir683-1-201ENSMUST00000179371 109 ntBASIC5.35□□□□□ -1.55
Scn1bP97952 Stpg4-203ENSMUST00000187078 668 ntAPPRIS ALT2 TSL 3 BASIC5.35□□□□□ -1.55
Scn1bP97952 2010005H15Rik-202ENSMUST00000187183 639 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Scn1bP97952 Gm7804-202ENSMUST00000194187 854 ntBASIC5.35□□□□□ -1.55
Scn1bP97952 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC5.35□□□□□ -1.55
Scn1bP97952 Gm38343-201ENSMUST00000195786 1060 ntTSL 5 BASIC5.35□□□□□ -1.55
Scn1bP97952 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Scn1bP97952 Gm18215-201ENSMUST00000204429 798 ntBASIC5.35□□□□□ -1.55
Scn1bP97952 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC5.35□□□□□ -1.55
Scn1bP97952 Gm6702-201ENSMUST00000208496 471 ntBASIC5.35□□□□□ -1.55
Scn1bP97952 Gm7769-201ENSMUST00000212900 933 ntBASIC5.35□□□□□ -1.55
Scn1bP97952 Spata19-204ENSMUST00000214287 642 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Scn1bP97952 Gm39336-201ENSMUST00000214933 260 ntTSL 3 BASIC5.35□□□□□ -1.55
Scn1bP97952 Ldah-206ENSMUST00000218086 1159 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Scn1bP97952 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Scn1bP97952 AC154851.1-201ENSMUST00000221591 655 ntBASIC5.35□□□□□ -1.55
Scn1bP97952 Gm19189-201ENSMUST00000221689 754 ntBASIC5.35□□□□□ -1.55
Scn1bP97952 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC5.35□□□□□ -1.55
Scn1bP97952 AC105950.1-201ENSMUST00000222637 408 ntBASIC5.35□□□□□ -1.55
Scn1bP97952 AC158511.1-201ENSMUST00000223622 764 ntBASIC5.35□□□□□ -1.55
Scn1bP97952 AC158750.1-201ENSMUST00000226163 634 ntBASIC5.35□□□□□ -1.55
Scn1bP97952 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
Scn1bP97952 Olfr664-201ENSMUST00000072887 966 ntAPPRIS P5 BASIC5.35□□□□□ -1.55
Scn1bP97952 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Scn1bP97952 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Scn1bP97952 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC5.35□□□□□ -1.55
Scn1bP97952 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Scn1bP97952 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Scn1bP97952 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC5.35□□□□□ -1.55
Scn1bP97952 Gm37217-201ENSMUST00000194017 3521 ntBASIC5.35□□□□□ -1.55
Scn1bP97952 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Scn1bP97952 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Scn1bP97952 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC5.34□□□□□ -1.55
Scn1bP97952 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC5.34□□□□□ -1.55
Scn1bP97952 Gm2888-201ENSMUST00000170521 1758 ntAPPRIS P5 TSL 5 BASIC5.34□□□□□ -1.55
Scn1bP97952 Gm7876-202ENSMUST00000171305 1758 ntAPPRIS P5 TSL 5 BASIC5.34□□□□□ -1.55
Scn1bP97952 Gm3127-202ENSMUST00000171866 1758 ntAPPRIS P5 TSL 5 BASIC5.34□□□□□ -1.55
Scn1bP97952 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Scn1bP97952 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
Scn1bP97952 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC5.34□□□□□ -1.55
Scn1bP97952 Gm38085-201ENSMUST00000195785 3062 ntBASIC5.34□□□□□ -1.55
Scn1bP97952 Gm25344-201ENSMUST00000104503 132 ntBASIC5.34□□□□□ -1.55
Scn1bP97952 Krtap9-5-201ENSMUST00000105052 1077 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Scn1bP97952 Gm13755-201ENSMUST00000118509 305 ntBASIC5.34□□□□□ -1.55
Scn1bP97952 Gm14836-201ENSMUST00000118567 471 ntBASIC5.34□□□□□ -1.55
Scn1bP97952 Tex35-204ENSMUST00000121911 805 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
Scn1bP97952 Gm16330-201ENSMUST00000128324 297 ntBASIC5.34□□□□□ -1.55
Scn1bP97952 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC5.34□□□□□ -1.55
Scn1bP97952 Gtsf1-209ENSMUST00000153930 799 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Scn1bP97952 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC5.34□□□□□ -1.55
Scn1bP97952 Gm23279-201ENSMUST00000157912 97 ntBASIC5.34□□□□□ -1.55
Scn1bP97952 Gm23894-201ENSMUST00000158107 313 ntBASIC5.34□□□□□ -1.55
Scn1bP97952 Ms4a2-202ENSMUST00000164792 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Scn1bP97952 Mir5617-201ENSMUST00000176786 57 ntBASIC5.34□□□□□ -1.55
Scn1bP97952 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC5.34□□□□□ -1.55
Scn1bP97952 Gm17048-201ENSMUST00000179266 847 ntBASIC5.34□□□□□ -1.55
Scn1bP97952 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Scn1bP97952 Gm10136-201ENSMUST00000183196 435 ntBASIC5.34□□□□□ -1.55
Scn1bP97952 Gm29036-201ENSMUST00000189967 877 ntBASIC5.34□□□□□ -1.55
Scn1bP97952 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC5.34□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 517 ms