Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Nkx3-1P97436 Gm8581-201ENSMUST00000188636 890 ntBASIC5.04□□□□□ -1.6
Nkx3-1P97436 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Nkx3-1P97436 Gm37024-201ENSMUST00000192224 868 ntBASIC5.04□□□□□ -1.6
Nkx3-1P97436 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC5.04□□□□□ -1.6
Nkx3-1P97436 Gm43148-201ENSMUST00000198237 520 ntBASIC5.04□□□□□ -1.6
Nkx3-1P97436 Gm19708-201ENSMUST00000199386 543 ntTSL 2 BASIC5.04□□□□□ -1.6
Nkx3-1P97436 Gm7838-201ENSMUST00000203221 1189 ntBASIC5.04□□□□□ -1.6
Nkx3-1P97436 Gm8039-201ENSMUST00000204758 712 ntBASIC5.04□□□□□ -1.6
Nkx3-1P97436 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Nkx3-1P97436 AC153845.2-203ENSMUST00000215889 617 ntTSL 3 BASIC5.04□□□□□ -1.6
Nkx3-1P97436 AC122188.1-201ENSMUST00000217534 312 ntBASIC5.04□□□□□ -1.6
Nkx3-1P97436 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC5.04□□□□□ -1.6
Nkx3-1P97436 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Nkx3-1P97436 Gm23624-201ENSMUST00000082463 321 ntBASIC5.04□□□□□ -1.6
Nkx3-1P97436 n-R5s215-201ENSMUST00000082480 104 ntBASIC5.04□□□□□ -1.6
Nkx3-1P97436 Mir133b-201ENSMUST00000083546 119 ntBASIC5.04□□□□□ -1.6
Nkx3-1P97436 Mir194-1-201ENSMUST00000083647 67 ntBASIC5.04□□□□□ -1.6
Nkx3-1P97436 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Nkx3-1P97436 Gm15182-201ENSMUST00000120832 1676 ntBASIC5.04□□□□□ -1.6
Nkx3-1P97436 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Nkx3-1P97436 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Nkx3-1P97436 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Nkx3-1P97436 Olfr1054-202ENSMUST00000213205 1410 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Nkx3-1P97436 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Nkx3-1P97436 Gm37926-201ENSMUST00000191922 2424 ntBASIC5.04□□□□□ -1.6
Nkx3-1P97436 Olfr874-202ENSMUST00000216982 2632 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Nkx3-1P97436 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC5.04□□□□□ -1.6
Nkx3-1P97436 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Nkx3-1P97436 Gm2080-201ENSMUST00000211299 1573 ntBASIC5.04□□□□□ -1.6
Nkx3-1P97436 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Nkx3-1P97436 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Nkx3-1P97436 Epyc-202ENSMUST00000105285 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Nkx3-1P97436 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Nkx3-1P97436 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Nkx3-1P97436 Serpinb5-203ENSMUST00000112730 2672 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Nkx3-1P97436 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Nkx3-1P97436 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
Nkx3-1P97436 AC112142.1-203ENSMUST00000228670 2472 ntBASIC5.03□□□□□ -1.6
Nkx3-1P97436 Gm20276-201ENSMUST00000216122 2648 ntBASIC5.03□□□□□ -1.6
Nkx3-1P97436 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Nkx3-1P97436 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Nkx3-1P97436 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Nkx3-1P97436 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Nkx3-1P97436 AC154841.1-201ENSMUST00000227263 1479 ntBASIC5.03□□□□□ -1.6
Nkx3-1P97436 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Nkx3-1P97436 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC5.03□□□□□ -1.6
Nkx3-1P97436 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Nkx3-1P97436 Gm38096-201ENSMUST00000193692 2389 ntBASIC5.03□□□□□ -1.6
Nkx3-1P97436 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC5.03□□□□□ -1.6
Nkx3-1P97436 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC5.03□□□□□ -1.6
Nkx3-1P97436 Gm14515-201ENSMUST00000121327 216 ntBASIC5.03□□□□□ -1.6
Nkx3-1P97436 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC5.03□□□□□ -1.6
Nkx3-1P97436 Gm11734-201ENSMUST00000132261 728 ntTSL 3 BASIC5.03□□□□□ -1.6
Nkx3-1P97436 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC5.03□□□□□ -1.6
Nkx3-1P97436 Gm17333-201ENSMUST00000169531 378 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Nkx3-1P97436 Gm22993-201ENSMUST00000175423 254 ntBASIC5.03□□□□□ -1.6
Nkx3-1P97436 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Nkx3-1P97436 Gm29124-201ENSMUST00000186576 452 ntBASIC5.03□□□□□ -1.6
Nkx3-1P97436 1700016G22Rik-202ENSMUST00000186843 594 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Nkx3-1P97436 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC5.03□□□□□ -1.6
Nkx3-1P97436 Gm36999-201ENSMUST00000192756 1046 ntBASIC5.03□□□□□ -1.6
Nkx3-1P97436 Gm37966-201ENSMUST00000193122 326 ntBASIC5.03□□□□□ -1.6
Nkx3-1P97436 4931440P22Rik-205ENSMUST00000194448 474 ntBASIC5.03□□□□□ -1.6
Nkx3-1P97436 Gm7733-201ENSMUST00000199038 919 ntBASIC5.03□□□□□ -1.6
Nkx3-1P97436 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC5.03□□□□□ -1.6
Nkx3-1P97436 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC5.03□□□□□ -1.6
Nkx3-1P97436 Gm3785-201ENSMUST00000221000 202 ntBASIC5.03□□□□□ -1.6
Nkx3-1P97436 Gm7768-201ENSMUST00000222988 597 ntBASIC5.03□□□□□ -1.6
Nkx3-1P97436 Gm7042-201ENSMUST00000223027 384 ntBASIC5.03□□□□□ -1.6
Nkx3-1P97436 CT033778.1-201ENSMUST00000224767 767 ntBASIC5.03□□□□□ -1.6
Nkx3-1P97436 Gm5087-204ENSMUST00000225820 645 ntBASIC5.03□□□□□ -1.6
Nkx3-1P97436 AC133283.1-201ENSMUST00000228443 859 ntBASIC5.03□□□□□ -1.6
Nkx3-1P97436 4931400O07Rik-201ENSMUST00000033537 647 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Nkx3-1P97436 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
Nkx3-1P97436 Gm24525-201ENSMUST00000082917 151 ntBASIC5.03□□□□□ -1.6
Nkx3-1P97436 Gm38128-201ENSMUST00000192085 3250 ntBASIC5.03□□□□□ -1.6
Nkx3-1P97436 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC5.03□□□□□ -1.6
Nkx3-1P97436 Gm43282-201ENSMUST00000201848 2157 ntBASIC5.03□□□□□ -1.6
Nkx3-1P97436 AC110043.1-201ENSMUST00000220278 1627 ntBASIC5.03□□□□□ -1.6
Nkx3-1P97436 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC5.03□□□□□ -1.6
Nkx3-1P97436 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC5.03□□□□□ -1.6
Nkx3-1P97436 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Nkx3-1P97436 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Nkx3-1P97436 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Nkx3-1P97436 CT025675.1-201ENSMUST00000228171 1567 ntBASIC5.03□□□□□ -1.6
Nkx3-1P97436 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Nkx3-1P97436 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Nkx3-1P97436 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Nkx3-1P97436 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC5.03□□□□□ -1.6
Nkx3-1P97436 Dnah3-204ENSMUST00000209154 12265 ntAPPRIS P5 TSL 5 BASIC5.03□□□□□ -1.6
Nkx3-1P97436 Olfr181-201ENSMUST00000075361 1391 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
Nkx3-1P97436 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.61
Nkx3-1P97436 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Nkx3-1P97436 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Nkx3-1P97436 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC5.02□□□□□ -1.61
Nkx3-1P97436 AC121094.1-201ENSMUST00000224766 1345 ntBASIC5.02□□□□□ -1.61
Nkx3-1P97436 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Nkx3-1P97436 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Nkx3-1P97436 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC5.02□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms