Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Cdh11P55288 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Cdh11P55288 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Cdh11P55288 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Cdh11P55288 AC153729.4-201ENSMUST00000217582 3826 ntBASIC5.32□□□□□ -1.56
Cdh11P55288 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Cdh11P55288 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Cdh11P55288 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Cdh11P55288 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Cdh11P55288 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Cdh11P55288 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Cdh11P55288 Gm12643-201ENSMUST00000116078 374 ntBASIC5.32□□□□□ -1.56
Cdh11P55288 Gm13679-201ENSMUST00000118678 484 ntBASIC5.32□□□□□ -1.56
Cdh11P55288 Gm12813-201ENSMUST00000119615 902 ntBASIC5.32□□□□□ -1.56
Cdh11P55288 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC5.32□□□□□ -1.56
Cdh11P55288 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC5.32□□□□□ -1.56
Cdh11P55288 Gm13460-201ENSMUST00000121274 353 ntBASIC5.32□□□□□ -1.56
Cdh11P55288 Gm11990-201ENSMUST00000121505 897 ntBASIC5.32□□□□□ -1.56
Cdh11P55288 1700057H15Rik-201ENSMUST00000127913 595 ntTSL 3 BASIC5.32□□□□□ -1.56
Cdh11P55288 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Cdh11P55288 Gm25332-201ENSMUST00000158038 105 ntBASIC5.32□□□□□ -1.56
Cdh11P55288 Gm23995-201ENSMUST00000158060 129 ntBASIC5.32□□□□□ -1.56
Cdh11P55288 Gm22518-201ENSMUST00000158267 68 ntBASIC5.32□□□□□ -1.56
Cdh11P55288 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Cdh11P55288 Gm23631-201ENSMUST00000175291 123 ntBASIC5.32□□□□□ -1.56
Cdh11P55288 Gm24465-201ENSMUST00000178398 107 ntBASIC5.32□□□□□ -1.56
Cdh11P55288 Gm21971-201ENSMUST00000180187 337 ntTSL 5 BASIC5.32□□□□□ -1.56
Cdh11P55288 Gm3650-201ENSMUST00000180600 747 ntBASIC5.32□□□□□ -1.56
Cdh11P55288 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Cdh11P55288 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC5.32□□□□□ -1.56
Cdh11P55288 Mocs2-217ENSMUST00000184781 1250 ntTSL 5 BASIC5.32□□□□□ -1.56
Cdh11P55288 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Cdh11P55288 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Cdh11P55288 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC5.32□□□□□ -1.56
Cdh11P55288 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC5.32□□□□□ -1.56
Cdh11P55288 Tshb-206ENSMUST00000200041 537 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Cdh11P55288 Gm43501-201ENSMUST00000202513 107 ntBASIC5.32□□□□□ -1.56
Cdh11P55288 Gm20177-201ENSMUST00000203705 334 ntBASIC5.32□□□□□ -1.56
Cdh11P55288 A530053G22Rik-203ENSMUST00000204370 612 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Cdh11P55288 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC5.32□□□□□ -1.56
Cdh11P55288 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC5.32□□□□□ -1.56
Cdh11P55288 Gm33501-201ENSMUST00000209257 1193 ntTSL 5 BASIC5.32□□□□□ -1.56
Cdh11P55288 Gm45272-202ENSMUST00000209875 502 ntTSL 3 BASIC5.32□□□□□ -1.56
Cdh11P55288 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC5.32□□□□□ -1.56
Cdh11P55288 Olfr928-ps1-201ENSMUST00000213313 237 ntBASIC5.32□□□□□ -1.56
Cdh11P55288 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Cdh11P55288 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC5.32□□□□□ -1.56
Cdh11P55288 Gm40787-201ENSMUST00000218056 317 ntTSL 3 BASIC5.32□□□□□ -1.56
Cdh11P55288 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC5.32□□□□□ -1.56
Cdh11P55288 Gm19169-201ENSMUST00000220109 1246 ntBASIC5.32□□□□□ -1.56
Cdh11P55288 AC211878.6-201ENSMUST00000221896 358 ntBASIC5.32□□□□□ -1.56
Cdh11P55288 AC163743.1-201ENSMUST00000224309 270 ntBASIC5.32□□□□□ -1.56
Cdh11P55288 AC096628.1-201ENSMUST00000226060 641 ntBASIC5.32□□□□□ -1.56
Cdh11P55288 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Cdh11P55288 Cd160-201ENSMUST00000047702 1121 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
Cdh11P55288 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Cdh11P55288 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Cdh11P55288 Mir365-2-201ENSMUST00000083555 112 ntBASIC5.32□□□□□ -1.56
Cdh11P55288 Mir412-201ENSMUST00000083636 80 ntBASIC5.32□□□□□ -1.56
Cdh11P55288 Olfr467-201ENSMUST00000084756 927 ntBASIC5.32□□□□□ -1.56
Cdh11P55288 Gm10221-201ENSMUST00000088299 309 ntBASIC5.32□□□□□ -1.56
Cdh11P55288 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Cdh11P55288 Gm42671-201ENSMUST00000198013 1604 ntBASIC5.32□□□□□ -1.56
Cdh11P55288 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC5.32□□□□□ -1.56
Cdh11P55288 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Cdh11P55288 Gm37717-201ENSMUST00000192647 3027 ntBASIC5.32□□□□□ -1.56
Cdh11P55288 Gm11516-201ENSMUST00000118450 1582 ntBASIC5.32□□□□□ -1.56
Cdh11P55288 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Cdh11P55288 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Cdh11P55288 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Cdh11P55288 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Cdh11P55288 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Cdh11P55288 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Cdh11P55288 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Cdh11P55288 Gm10062-201ENSMUST00000072180 1470 ntBASIC5.32□□□□□ -1.56
Cdh11P55288 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
Cdh11P55288 Cyp39a1-201ENSMUST00000170988 3053 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Cdh11P55288 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Cdh11P55288 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Cdh11P55288 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Cdh11P55288 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Cdh11P55288 Olfr446-203ENSMUST00000215686 4210 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Cdh11P55288 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Cdh11P55288 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Cdh11P55288 Zfp352-201ENSMUST00000080541 1656 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Cdh11P55288 Slc22a26-202ENSMUST00000120522 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Cdh11P55288 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC5.31□□□□□ -1.56
Cdh11P55288 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Cdh11P55288 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Cdh11P55288 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
Cdh11P55288 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Cdh11P55288 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Cdh11P55288 Gm23440-201ENSMUST00000104299 130 ntBASIC5.31□□□□□ -1.56
Cdh11P55288 Cldn34d-201ENSMUST00000114054 1003 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Cdh11P55288 Gm7146-201ENSMUST00000116079 739 ntBASIC5.31□□□□□ -1.56
Cdh11P55288 Mageb16-ps1-201ENSMUST00000117991 1127 ntBASIC5.31□□□□□ -1.56
Cdh11P55288 Gm12099-201ENSMUST00000118660 750 ntBASIC5.31□□□□□ -1.56
Cdh11P55288 Gm12189-201ENSMUST00000119779 912 ntBASIC5.31□□□□□ -1.56
Cdh11P55288 Olfr1021-ps1-201ENSMUST00000121914 1042 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
Cdh11P55288 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC5.31□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 205.7 ms