Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Gm28763-201ENSMUST00000188870 166 ntTSL 5 BASIC6.1□□□□□ -1.43
Atxn1P54254 Gm29579-201ENSMUST00000190820 166 ntTSL 5 BASIC6.1□□□□□ -1.43
Atxn1P54254 Gm37884-201ENSMUST00000191857 818 ntBASIC6.1□□□□□ -1.43
Atxn1P54254 Gm43608-201ENSMUST00000197703 687 ntTSL 3 BASIC6.1□□□□□ -1.43
Atxn1P54254 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC6.1□□□□□ -1.43
Atxn1P54254 Gm43456-201ENSMUST00000202519 457 ntBASIC6.1□□□□□ -1.43
Atxn1P54254 Gm6290-201ENSMUST00000207666 1158 ntBASIC6.1□□□□□ -1.43
Atxn1P54254 Akr1c13-201ENSMUST00000021634 1262 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Atxn1P54254 AC153961.2-201ENSMUST00000218877 164 ntBASIC6.1□□□□□ -1.43
Atxn1P54254 Gm6474-201ENSMUST00000223250 699 ntBASIC6.1□□□□□ -1.43
Atxn1P54254 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC6.1□□□□□ -1.43
Atxn1P54254 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Atxn1P54254 Mir143-201ENSMUST00000083511 63 ntBASIC6.1□□□□□ -1.43
Atxn1P54254 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC6.1□□□□□ -1.43
Atxn1P54254 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Atxn1P54254 Gm14245-201ENSMUST00000118939 1843 ntBASIC6.1□□□□□ -1.43
Atxn1P54254 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
Atxn1P54254 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Atxn1P54254 AC159006.2-201ENSMUST00000228734 4144 ntBASIC6.1□□□□□ -1.43
Atxn1P54254 Gm37183-201ENSMUST00000191712 3405 ntBASIC6.1□□□□□ -1.43
Atxn1P54254 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Atxn1P54254 Gm43164-201ENSMUST00000202529 2128 ntBASIC6.1□□□□□ -1.43
Atxn1P54254 Gm43682-201ENSMUST00000202150 2090 ntBASIC6.1□□□□□ -1.43
Atxn1P54254 Gm3985-201ENSMUST00000132101 2515 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Atxn1P54254 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Atxn1P54254 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Atxn1P54254 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC6.09□□□□□ -1.43
Atxn1P54254 Olfr495-201ENSMUST00000210990 1440 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Atxn1P54254 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Atxn1P54254 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Atxn1P54254 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Atxn1P54254 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Atxn1P54254 Gm22103-201ENSMUST00000116733 121 ntBASIC6.09□□□□□ -1.43
Atxn1P54254 Gm26475-201ENSMUST00000116769 121 ntBASIC6.09□□□□□ -1.43
Atxn1P54254 Gm23620-201ENSMUST00000116812 121 ntBASIC6.09□□□□□ -1.43
Atxn1P54254 Gm25042-201ENSMUST00000116856 121 ntBASIC6.09□□□□□ -1.43
Atxn1P54254 Gm25540-201ENSMUST00000116880 121 ntBASIC6.09□□□□□ -1.43
Atxn1P54254 Gm16200-201ENSMUST00000120385 331 ntBASIC6.09□□□□□ -1.43
Atxn1P54254 Gm14876-201ENSMUST00000120795 327 ntBASIC6.09□□□□□ -1.43
Atxn1P54254 Gm12936-201ENSMUST00000121439 301 ntBASIC6.09□□□□□ -1.43
Atxn1P54254 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC6.09□□□□□ -1.43
Atxn1P54254 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Atxn1P54254 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC6.09□□□□□ -1.43
Atxn1P54254 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Atxn1P54254 Tmem258-204ENSMUST00000166412 447 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Atxn1P54254 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Atxn1P54254 Vmn1r-ps45-201ENSMUST00000174106 955 ntBASIC6.09□□□□□ -1.43
Atxn1P54254 Gm23550-201ENSMUST00000179003 121 ntBASIC6.09□□□□□ -1.43
Atxn1P54254 Gm25123-201ENSMUST00000179154 121 ntBASIC6.09□□□□□ -1.43
Atxn1P54254 Gm25353-201ENSMUST00000179366 121 ntBASIC6.09□□□□□ -1.43
Atxn1P54254 Gm22992-201ENSMUST00000179496 121 ntBASIC6.09□□□□□ -1.43
Atxn1P54254 Gm25892-201ENSMUST00000179867 121 ntBASIC6.09□□□□□ -1.43
Atxn1P54254 Gm24092-201ENSMUST00000180257 121 ntBASIC6.09□□□□□ -1.43
Atxn1P54254 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC6.09□□□□□ -1.43
Atxn1P54254 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC6.09□□□□□ -1.43
Atxn1P54254 Gm17847-201ENSMUST00000188261 1127 ntBASIC6.09□□□□□ -1.43
Atxn1P54254 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC6.09□□□□□ -1.43
Atxn1P54254 9430087B13Rik-201ENSMUST00000196548 1085 ntBASIC6.09□□□□□ -1.43
Atxn1P54254 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
Atxn1P54254 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Atxn1P54254 Olfr1509-203ENSMUST00000206100 1161 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
Atxn1P54254 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC6.09□□□□□ -1.43
Atxn1P54254 Gm4587-201ENSMUST00000209135 637 ntBASIC6.09□□□□□ -1.43
Atxn1P54254 Gm45473-201ENSMUST00000211452 616 ntBASIC6.09□□□□□ -1.43
Atxn1P54254 AC151971.3-201ENSMUST00000214694 404 ntBASIC6.09□□□□□ -1.43
Atxn1P54254 AC091783.3-201ENSMUST00000223969 681 ntBASIC6.09□□□□□ -1.43
Atxn1P54254 AC116591.1-201ENSMUST00000227919 351 ntBASIC6.09□□□□□ -1.43
Atxn1P54254 Ms4a2-201ENSMUST00000025583 1211 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Atxn1P54254 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC6.09□□□□□ -1.43
Atxn1P54254 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
Atxn1P54254 Meig1-201ENSMUST00000064685 706 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Atxn1P54254 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Atxn1P54254 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
Atxn1P54254 Olfr1472-201ENSMUST00000077501 945 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Atxn1P54254 Olfr1475-201ENSMUST00000080801 945 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Atxn1P54254 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Atxn1P54254 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Atxn1P54254 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
Atxn1P54254 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Atxn1P54254 Gm44102-201ENSMUST00000204031 1666 ntBASIC6.09□□□□□ -1.43
Atxn1P54254 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC6.09□□□□□ -1.43
Atxn1P54254 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Atxn1P54254 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Atxn1P54254 Agtr1b-202ENSMUST00000163776 1633 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Atxn1P54254 Gm37023-201ENSMUST00000192895 2426 ntBASIC6.09□□□□□ -1.43
Atxn1P54254 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Atxn1P54254 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Atxn1P54254 Adam30-201ENSMUST00000050342 3510 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Atxn1P54254 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
Atxn1P54254 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC6.09□□□□□ -1.44
Atxn1P54254 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Atxn1P54254 Olfr874-202ENSMUST00000216982 2632 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
Atxn1P54254 Gm43176-201ENSMUST00000199653 2989 ntBASIC6.09□□□□□ -1.44
Atxn1P54254 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
Atxn1P54254 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Atxn1P54254 Gm43981-201ENSMUST00000203285 1467 ntBASIC6.09□□□□□ -1.44
Atxn1P54254 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Atxn1P54254 Gm38128-201ENSMUST00000192085 3250 ntBASIC6.08□□□□□ -1.44
Atxn1P54254 AC122305.1-201ENSMUST00000214803 3921 ntBASIC6.08□□□□□ -1.44
Atxn1P54254 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms