Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Gm15164-201ENSMUST00000122203 271 ntBASIC6.62□□□□□ -1.35
Usp4P35123 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC6.62□□□□□ -1.35
Usp4P35123 Gm23259-201ENSMUST00000158318 303 ntBASIC6.62□□□□□ -1.35
Usp4P35123 Gm10177-201ENSMUST00000160052 444 ntBASIC6.62□□□□□ -1.35
Usp4P35123 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Usp4P35123 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC6.62□□□□□ -1.35
Usp4P35123 Gm18833-201ENSMUST00000173218 862 ntBASIC6.62□□□□□ -1.35
Usp4P35123 Gm6803-201ENSMUST00000178301 435 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Usp4P35123 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Usp4P35123 Gm2075-201ENSMUST00000180285 435 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Usp4P35123 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Usp4P35123 Gm37380-201ENSMUST00000193752 397 ntBASIC6.62□□□□□ -1.35
Usp4P35123 Gm18382-201ENSMUST00000194394 582 ntBASIC6.62□□□□□ -1.35
Usp4P35123 Gm42610-201ENSMUST00000196557 650 ntTSL 3 BASIC6.62□□□□□ -1.35
Usp4P35123 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC6.62□□□□□ -1.35
Usp4P35123 Gm4859-201ENSMUST00000199625 787 ntBASIC6.62□□□□□ -1.35
Usp4P35123 Gm44265-201ENSMUST00000203631 465 ntBASIC6.62□□□□□ -1.35
Usp4P35123 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Usp4P35123 Gm17908-201ENSMUST00000205552 1256 ntBASIC6.62□□□□□ -1.35
Usp4P35123 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Usp4P35123 Gm2996-201ENSMUST00000211398 537 ntBASIC6.62□□□□□ -1.35
Usp4P35123 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC6.62□□□□□ -1.35
Usp4P35123 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC6.62□□□□□ -1.35
Usp4P35123 Gm19572-201ENSMUST00000214326 338 ntBASIC6.62□□□□□ -1.35
Usp4P35123 Olfr228-201ENSMUST00000216534 942 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Usp4P35123 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Usp4P35123 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC6.62□□□□□ -1.35
Usp4P35123 Gm2022-201ENSMUST00000220585 435 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Usp4P35123 AC154640.1-202ENSMUST00000227828 496 ntBASIC6.62□□□□□ -1.35
Usp4P35123 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Usp4P35123 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Usp4P35123 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Usp4P35123 Olfr390-201ENSMUST00000092919 936 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Usp4P35123 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Usp4P35123 Olfr568-201ENSMUST00000098216 942 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Usp4P35123 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Usp4P35123 Gm44416-201ENSMUST00000204055 2066 ntBASIC6.62□□□□□ -1.35
Usp4P35123 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Usp4P35123 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC6.62□□□□□ -1.35
Usp4P35123 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Usp4P35123 Fmn1-202ENSMUST00000099576 11817 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Usp4P35123 Angptl1-201ENSMUST00000027885 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Usp4P35123 Gm38105-201ENSMUST00000192112 2621 ntBASIC6.62□□□□□ -1.35
Usp4P35123 Gm44440-201ENSMUST00000203139 2373 ntBASIC6.61□□□□□ -1.35
Usp4P35123 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Usp4P35123 Fam35a-206ENSMUST00000228626 3100 ntBASIC6.61□□□□□ -1.35
Usp4P35123 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Usp4P35123 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Usp4P35123 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Usp4P35123 Gm14445-201ENSMUST00000117051 1484 ntBASIC6.61□□□□□ -1.35
Usp4P35123 Gm44530-201ENSMUST00000207920 3559 ntBASIC6.61□□□□□ -1.35
Usp4P35123 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC6.61□□□□□ -1.35
Usp4P35123 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
Usp4P35123 AC160029.1-201ENSMUST00000219628 2678 ntBASIC6.61□□□□□ -1.35
Usp4P35123 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Usp4P35123 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Usp4P35123 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
Usp4P35123 Apoa2-204ENSMUST00000111321 518 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
Usp4P35123 Gm14382-201ENSMUST00000117374 437 ntBASIC6.61□□□□□ -1.35
Usp4P35123 Gm2003-201ENSMUST00000118537 636 ntBASIC6.61□□□□□ -1.35
Usp4P35123 Gm12135-201ENSMUST00000119170 466 ntBASIC6.61□□□□□ -1.35
Usp4P35123 Gm12115-201ENSMUST00000119969 447 ntBASIC6.61□□□□□ -1.35
Usp4P35123 Olfr1081-ps1-201ENSMUST00000120210 945 ntBASIC6.61□□□□□ -1.35
Usp4P35123 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC6.61□□□□□ -1.35
Usp4P35123 Gm14989-201ENSMUST00000120497 207 ntBASIC6.61□□□□□ -1.35
Usp4P35123 Gm1989-201ENSMUST00000126244 636 ntBASIC6.61□□□□□ -1.35
Usp4P35123 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC6.61□□□□□ -1.35
Usp4P35123 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC6.61□□□□□ -1.35
Usp4P35123 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Usp4P35123 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
Usp4P35123 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC6.61□□□□□ -1.35
Usp4P35123 Gm17655-201ENSMUST00000167969 255 ntBASIC6.61□□□□□ -1.35
Usp4P35123 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
Usp4P35123 Gm5871-201ENSMUST00000176461 718 ntBASIC6.61□□□□□ -1.35
Usp4P35123 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC6.61□□□□□ -1.35
Usp4P35123 Gm21614-201ENSMUST00000183260 1005 ntBASIC6.61□□□□□ -1.35
Usp4P35123 Gm27186-201ENSMUST00000184223 307 ntBASIC6.61□□□□□ -1.35
Usp4P35123 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Usp4P35123 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC6.61□□□□□ -1.35
Usp4P35123 Gm38326-201ENSMUST00000194030 686 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Usp4P35123 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Usp4P35123 Gm43004-201ENSMUST00000201872 703 ntBASIC6.61□□□□□ -1.35
Usp4P35123 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC6.61□□□□□ -1.35
Usp4P35123 Gm30498-201ENSMUST00000204033 615 ntTSL 5 BASIC6.61□□□□□ -1.35
Usp4P35123 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
Usp4P35123 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
Usp4P35123 AC127581.1-201ENSMUST00000214084 771 ntTSL 5 BASIC6.61□□□□□ -1.35
Usp4P35123 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC6.61□□□□□ -1.35
Usp4P35123 Olfr956-ps1-201ENSMUST00000216492 867 ntBASIC6.61□□□□□ -1.35
Usp4P35123 Gm19174-201ENSMUST00000216944 956 ntBASIC6.61□□□□□ -1.35
Usp4P35123 AC153975.1-201ENSMUST00000220087 926 ntBASIC6.61□□□□□ -1.35
Usp4P35123 AC154558.1-201ENSMUST00000222278 415 ntBASIC6.61□□□□□ -1.35
Usp4P35123 AC164297.5-201ENSMUST00000224365 198 ntBASIC6.61□□□□□ -1.35
Usp4P35123 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC6.61□□□□□ -1.35
Usp4P35123 AC154806.5-205ENSMUST00000228828 411 ntBASIC6.61□□□□□ -1.35
Usp4P35123 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Usp4P35123 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Usp4P35123 Olfr815-201ENSMUST00000071557 951 ntBASIC6.61□□□□□ -1.35
Usp4P35123 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Usp4P35123 Mir425-201ENSMUST00000083645 85 ntBASIC6.61□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 98.6 ms