Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Igkv15-103-201ENSMUST00000103324 375 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
P20040 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
P20040 Dynlt1-ps1-201ENSMUST00000117045 342 ntBASIC5.1□□□□□ -1.59
P20040 Gm11227-201ENSMUST00000119774 471 ntBASIC5.1□□□□□ -1.59
P20040 Gm14805-201ENSMUST00000120172 340 ntBASIC5.1□□□□□ -1.59
P20040 Gm11734-201ENSMUST00000132261 728 ntTSL 3 BASIC5.1□□□□□ -1.59
P20040 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC5.1□□□□□ -1.59
P20040 1700093J21Rik-201ENSMUST00000143671 648 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
P20040 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
P20040 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
P20040 Gm23050-201ENSMUST00000158775 165 ntBASIC5.1□□□□□ -1.59
P20040 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
P20040 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
P20040 Tor1aip1-210ENSMUST00000169241 3716 ntAPPRIS ALT2 TSL 3 BASIC5.1□□□□□ -1.59
P20040 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
P20040 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC5.1□□□□□ -1.59
P20040 Gm19560-201ENSMUST00000177510 514 ntBASIC5.1□□□□□ -1.59
P20040 Gm26057-201ENSMUST00000178099 165 ntBASIC5.1□□□□□ -1.59
P20040 Gm5430-201ENSMUST00000182525 915 ntBASIC5.1□□□□□ -1.59
P20040 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
P20040 Gm42827-201ENSMUST00000197058 1515 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
P20040 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
P20040 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC5.1□□□□□ -1.59
P20040 Gm36548-202ENSMUST00000200222 494 ntTSL 5 BASIC5.1□□□□□ -1.59
P20040 Gm5990-201ENSMUST00000203126 746 ntBASIC5.1□□□□□ -1.59
P20040 Gm43900-201ENSMUST00000204868 2669 ntBASIC5.1□□□□□ -1.59
P20040 Gm31522-201ENSMUST00000207942 762 ntTSL 5 BASIC5.1□□□□□ -1.59
P20040 Spcs2-206ENSMUST00000208465 736 ntTSL 5 BASIC5.1□□□□□ -1.59
P20040 Olfr703-202ENSMUST00000216254 1920 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
P20040 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC5.1□□□□□ -1.59
P20040 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
P20040 AC119894.1-201ENSMUST00000220399 350 ntBASIC5.1□□□□□ -1.59
P20040 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
P20040 AC164302.1-201ENSMUST00000227036 433 ntBASIC5.1□□□□□ -1.59
P20040 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
P20040 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
P20040 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
P20040 1810024B03Rik-201ENSMUST00000056146 1266 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
P20040 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
P20040 Olfr266-201ENSMUST00000059486 1027 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
P20040 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
P20040 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
P20040 Olfr1431-201ENSMUST00000072316 939 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
P20040 Fpr-rs4-201ENSMUST00000095651 972 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
P20040 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
P20040 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
P20040 Olfr75-ps1-203ENSMUST00000144832 2655 ntTSL 2 BASIC5.1□□□□□ -1.59
P20040 Olfr16-202ENSMUST00000215254 2690 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
P20040 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC5.09□□□□□ -1.59
P20040 Gm14661-201ENSMUST00000152669 2051 ntTSL 5 BASIC5.09□□□□□ -1.59
P20040 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
P20040 Gm13119-201ENSMUST00000094526 2094 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
P20040 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC5.09□□□□□ -1.59
P20040 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC5.09□□□□□ -1.59
P20040 A530076I17Rik-202ENSMUST00000228352 1524 ntBASIC5.09□□□□□ -1.59
P20040 CT009480.3-201ENSMUST00000224051 3032 ntBASIC5.09□□□□□ -1.59
P20040 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
P20040 Gm5373-202ENSMUST00000212931 2964 ntTSL 2 BASIC5.09□□□□□ -1.59
P20040 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
P20040 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC5.09□□□□□ -1.59
P20040 Cdh7-203ENSMUST00000129923 1409 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
P20040 Gm43328-201ENSMUST00000198544 1434 ntBASIC5.09□□□□□ -1.59
P20040 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
P20040 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
P20040 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
P20040 Gm12077-201ENSMUST00000117049 364 ntBASIC5.09□□□□□ -1.59
P20040 Gm8501-201ENSMUST00000117684 432 ntBASIC5.09□□□□□ -1.59
P20040 Gm14115-201ENSMUST00000119242 482 ntBASIC5.09□□□□□ -1.59
P20040 Gm6884-201ENSMUST00000119318 615 ntBASIC5.09□□□□□ -1.59
P20040 Xlr3e-ps-201ENSMUST00000119644 682 ntBASIC5.09□□□□□ -1.59
P20040 Gm11852-201ENSMUST00000120806 222 ntBASIC5.09□□□□□ -1.59
P20040 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC5.09□□□□□ -1.59
P20040 Gm14237-201ENSMUST00000122080 430 ntBASIC5.09□□□□□ -1.59
P20040 Gm14970-201ENSMUST00000122289 355 ntBASIC5.09□□□□□ -1.59
P20040 Gm22599-201ENSMUST00000157597 132 ntBASIC5.09□□□□□ -1.59
P20040 Gm23279-201ENSMUST00000157912 97 ntBASIC5.09□□□□□ -1.59
P20040 Gm24767-201ENSMUST00000158509 95 ntBASIC5.09□□□□□ -1.59
P20040 Gm16164-201ENSMUST00000160078 468 ntBASIC5.09□□□□□ -1.59
P20040 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
P20040 Vmn2r-ps12-201ENSMUST00000175833 623 ntBASIC5.09□□□□□ -1.59
P20040 1700003H04Rik-206ENSMUST00000180162 1086 ntAPPRIS P5 TSL 5 BASIC5.09□□□□□ -1.59
P20040 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
P20040 Gm18350-201ENSMUST00000187395 955 ntBASIC5.09□□□□□ -1.59
P20040 Gm8581-201ENSMUST00000188636 890 ntBASIC5.09□□□□□ -1.59
P20040 Gm34768-201ENSMUST00000193884 565 ntBASIC5.09□□□□□ -1.59
P20040 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC5.09□□□□□ -1.59
P20040 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC5.09□□□□□ -1.59
P20040 Gm8930-201ENSMUST00000201693 768 ntBASIC5.09□□□□□ -1.59
P20040 Gm19182-201ENSMUST00000207139 577 ntBASIC5.09□□□□□ -1.59
P20040 Gm39384-201ENSMUST00000213703 743 ntTSL 5 BASIC5.09□□□□□ -1.59
P20040 1700048P04Rik-201ENSMUST00000219825 369 ntTSL 3 BASIC5.09□□□□□ -1.59
P20040 AC154767.2-201ENSMUST00000224584 414 ntBASIC5.09□□□□□ -1.59
P20040 AC133203.2-201ENSMUST00000226709 464 ntBASIC5.09□□□□□ -1.59
P20040 AC132317.2-201ENSMUST00000227301 519 ntBASIC5.09□□□□□ -1.59
P20040 1700003H04Rik-201ENSMUST00000047110 1040 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
P20040 Magea4-201ENSMUST00000048675 948 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
P20040 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
P20040 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
P20040 Olfr651-201ENSMUST00000098176 1069 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
P20040 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms