Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC4.81□□□□□ -1.64
Cdx1P18111 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Cdx1P18111 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
Cdx1P18111 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Cdx1P18111 Gm46364-201ENSMUST00000218548 319 ntBASIC4.81□□□□□ -1.64
Cdx1P18111 Gm19186-201ENSMUST00000219922 333 ntBASIC4.81□□□□□ -1.64
Cdx1P18111 AC126685.1-201ENSMUST00000221001 121 ntBASIC4.81□□□□□ -1.64
Cdx1P18111 Gm19340-201ENSMUST00000221995 345 ntBASIC4.81□□□□□ -1.64
Cdx1P18111 Gm35619-201ENSMUST00000222548 600 ntBASIC4.81□□□□□ -1.64
Cdx1P18111 AC160962.1-203ENSMUST00000225167 1105 ntAPPRIS P5 BASIC4.81□□□□□ -1.64
Cdx1P18111 CT009556.1-201ENSMUST00000227282 449 ntBASIC4.81□□□□□ -1.64
Cdx1P18111 AC113031.1-201ENSMUST00000227400 432 ntBASIC4.81□□□□□ -1.64
Cdx1P18111 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
Cdx1P18111 Dppa3-201ENSMUST00000049644 833 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Cdx1P18111 Olfr148-201ENSMUST00000050807 1017 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Cdx1P18111 Olfr788-201ENSMUST00000056961 936 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Cdx1P18111 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Cdx1P18111 Olfr532-201ENSMUST00000073226 930 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Cdx1P18111 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Cdx1P18111 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC4.81□□□□□ -1.64
Cdx1P18111 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Cdx1P18111 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
Cdx1P18111 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Cdx1P18111 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Cdx1P18111 Gm18879-201ENSMUST00000221187 1537 ntBASIC4.81□□□□□ -1.64
Cdx1P18111 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Cdx1P18111 AC124516.2-201ENSMUST00000221455 1829 ntBASIC4.81□□□□□ -1.64
Cdx1P18111 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Cdx1P18111 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Cdx1P18111 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC4.81□□□□□ -1.64
Cdx1P18111 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Cdx1P18111 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Cdx1P18111 Gm37250-201ENSMUST00000194919 2388 ntBASIC4.8□□□□□ -1.64
Cdx1P18111 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Cdx1P18111 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
Cdx1P18111 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Cdx1P18111 Olfr552-202ENSMUST00000215712 4206 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Cdx1P18111 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Cdx1P18111 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Cdx1P18111 Dnah3-204ENSMUST00000209154 12265 ntAPPRIS P5 TSL 5 BASIC4.8□□□□□ -1.64
Cdx1P18111 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC4.8□□□□□ -1.64
Cdx1P18111 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Cdx1P18111 Gm26300-201ENSMUST00000102282 94 ntBASIC4.8□□□□□ -1.64
Cdx1P18111 Tex48-201ENSMUST00000102861 677 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Cdx1P18111 Gm25564-201ENSMUST00000104604 132 ntBASIC4.8□□□□□ -1.64
Cdx1P18111 Gm8250-201ENSMUST00000117398 774 ntBASIC4.8□□□□□ -1.64
Cdx1P18111 Gm14733-201ENSMUST00000117680 133 ntBASIC4.8□□□□□ -1.64
Cdx1P18111 Gm12641-201ENSMUST00000117874 985 ntBASIC4.8□□□□□ -1.64
Cdx1P18111 Gm11504-201ENSMUST00000120211 173 ntBASIC4.8□□□□□ -1.64
Cdx1P18111 Gm14831-201ENSMUST00000120253 409 ntBASIC4.8□□□□□ -1.64
Cdx1P18111 Gm15618-201ENSMUST00000121610 452 ntBASIC4.8□□□□□ -1.64
Cdx1P18111 Gm15022-201ENSMUST00000122074 746 ntBASIC4.8□□□□□ -1.64
Cdx1P18111 Gm14613-201ENSMUST00000122239 752 ntBASIC4.8□□□□□ -1.64
Cdx1P18111 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Cdx1P18111 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC4.8□□□□□ -1.64
Cdx1P18111 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC4.8□□□□□ -1.64
Cdx1P18111 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Cdx1P18111 4930412B13Rik-201ENSMUST00000149239 1276 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Cdx1P18111 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC4.8□□□□□ -1.64
Cdx1P18111 Gm13662-201ENSMUST00000157059 712 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Cdx1P18111 Gm9294-201ENSMUST00000165198 789 ntBASIC4.8□□□□□ -1.64
Cdx1P18111 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC4.8□□□□□ -1.64
Cdx1P18111 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Cdx1P18111 Gm21909-201ENSMUST00000178260 439 ntBASIC4.8□□□□□ -1.64
Cdx1P18111 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Cdx1P18111 Gm24949-201ENSMUST00000183609 215 ntBASIC4.8□□□□□ -1.64
Cdx1P18111 Gm27636-201ENSMUST00000184528 122 ntBASIC4.8□□□□□ -1.64
Cdx1P18111 Gm27653-201ENSMUST00000185037 136 ntBASIC4.8□□□□□ -1.64
Cdx1P18111 Gm29148-201ENSMUST00000188140 336 ntBASIC4.8□□□□□ -1.64
Cdx1P18111 Gm28996-201ENSMUST00000190316 721 ntBASIC4.8□□□□□ -1.64
Cdx1P18111 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Cdx1P18111 A730094K22Rik-201ENSMUST00000193867 740 ntBASIC4.8□□□□□ -1.64
Cdx1P18111 Gm34768-201ENSMUST00000193884 565 ntBASIC4.8□□□□□ -1.64
Cdx1P18111 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Cdx1P18111 Gm7492-201ENSMUST00000201745 725 ntBASIC4.8□□□□□ -1.64
Cdx1P18111 Gm43850-201ENSMUST00000202021 578 ntBASIC4.8□□□□□ -1.64
Cdx1P18111 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Cdx1P18111 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Cdx1P18111 Gm5324-201ENSMUST00000208115 476 ntBASIC4.8□□□□□ -1.64
Cdx1P18111 Gm45064-201ENSMUST00000208619 443 ntTSL 5 BASIC4.8□□□□□ -1.64
Cdx1P18111 AC123944.2-201ENSMUST00000215290 382 ntBASIC4.8□□□□□ -1.64
Cdx1P18111 Asf1a-204ENSMUST00000219271 725 ntTSL 5 BASIC4.8□□□□□ -1.64
Cdx1P18111 CT025579.4-201ENSMUST00000224598 627 ntBASIC4.8□□□□□ -1.64
Cdx1P18111 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Cdx1P18111 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Cdx1P18111 Olfr1076-201ENSMUST00000076263 942 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Cdx1P18111 Gm23686-201ENSMUST00000083241 164 ntBASIC4.8□□□□□ -1.64
Cdx1P18111 Gm4541-201ENSMUST00000208901 1848 ntBASIC4.8□□□□□ -1.64
Cdx1P18111 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Cdx1P18111 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC4.8□□□□□ -1.64
Cdx1P18111 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC4.8□□□□□ -1.64
Cdx1P18111 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
Cdx1P18111 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
Cdx1P18111 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Cdx1P18111 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Cdx1P18111 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Cdx1P18111 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Cdx1P18111 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Cdx1P18111 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Cdx1P18111 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms