Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm37687-203ENSMUST00000195020 1498 ntTSL 5 BASIC5.86□□□□□ -1.47
Lire1P11260 Gm37071-203ENSMUST00000195814 1498 ntTSL 5 BASIC5.86□□□□□ -1.47
Lire1P11260 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Lire1P11260 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
Lire1P11260 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Lire1P11260 1700006E09Rik-201ENSMUST00000010985 698 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Lire1P11260 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Lire1P11260 Gm7113-201ENSMUST00000120477 958 ntBASIC5.86□□□□□ -1.47
Lire1P11260 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC5.86□□□□□ -1.47
Lire1P11260 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC5.86□□□□□ -1.47
Lire1P11260 Gm23426-201ENSMUST00000122483 318 ntBASIC5.86□□□□□ -1.47
Lire1P11260 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Lire1P11260 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC5.86□□□□□ -1.47
Lire1P11260 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
Lire1P11260 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Lire1P11260 Gm23633-201ENSMUST00000175293 119 ntBASIC5.86□□□□□ -1.47
Lire1P11260 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC5.86□□□□□ -1.47
Lire1P11260 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC5.86□□□□□ -1.47
Lire1P11260 Gm27152-201ENSMUST00000183828 99 ntBASIC5.86□□□□□ -1.47
Lire1P11260 Mir6973b-201ENSMUST00000184185 80 ntBASIC5.86□□□□□ -1.47
Lire1P11260 Gm18700-201ENSMUST00000185791 553 ntBASIC5.86□□□□□ -1.47
Lire1P11260 Gm8826-201ENSMUST00000193161 948 ntBASIC5.86□□□□□ -1.47
Lire1P11260 Gm38343-201ENSMUST00000195786 1060 ntTSL 5 BASIC5.86□□□□□ -1.47
Lire1P11260 Gm7270-201ENSMUST00000195818 1128 ntBASIC5.86□□□□□ -1.47
Lire1P11260 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC5.86□□□□□ -1.47
Lire1P11260 Gm43850-201ENSMUST00000202021 578 ntBASIC5.86□□□□□ -1.47
Lire1P11260 Gm43596-201ENSMUST00000202818 884 ntBASIC5.86□□□□□ -1.47
Lire1P11260 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Lire1P11260 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC5.86□□□□□ -1.47
Lire1P11260 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC5.86□□□□□ -1.47
Lire1P11260 Olfr878-202ENSMUST00000212878 1064 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Lire1P11260 Gm18914-201ENSMUST00000214625 616 ntBASIC5.86□□□□□ -1.47
Lire1P11260 AC104906.1-201ENSMUST00000218122 913 ntBASIC5.86□□□□□ -1.47
Lire1P11260 Olfr923-204ENSMUST00000219798 1068 ntBASIC5.86□□□□□ -1.47
Lire1P11260 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Lire1P11260 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC5.86□□□□□ -1.47
Lire1P11260 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC5.86□□□□□ -1.47
Lire1P11260 AC129219.1-201ENSMUST00000224336 448 ntBASIC5.86□□□□□ -1.47
Lire1P11260 AC137902.1-201ENSMUST00000228184 102 ntBASIC5.86□□□□□ -1.47
Lire1P11260 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Lire1P11260 Olfr923-201ENSMUST00000051238 1068 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Lire1P11260 Olfr218-201ENSMUST00000057548 942 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Lire1P11260 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Lire1P11260 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Lire1P11260 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Lire1P11260 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Lire1P11260 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Lire1P11260 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC5.86□□□□□ -1.47
Lire1P11260 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC5.86□□□□□ -1.47
Lire1P11260 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Lire1P11260 Gm37268-201ENSMUST00000192254 2614 ntBASIC5.86□□□□□ -1.47
Lire1P11260 AW046200-203ENSMUST00000211787 2479 ntBASIC5.86□□□□□ -1.47
Lire1P11260 Olfr31-203ENSMUST00000217035 4126 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Lire1P11260 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Lire1P11260 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
Lire1P11260 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Lire1P11260 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Lire1P11260 Gm37053-201ENSMUST00000192399 2087 ntBASIC5.86□□□□□ -1.47
Lire1P11260 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
Lire1P11260 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Lire1P11260 Mug2-201ENSMUST00000081777 4579 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Lire1P11260 Gm45853-201ENSMUST00000212310 3171 ntBASIC5.85□□□□□ -1.47
Lire1P11260 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
Lire1P11260 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Lire1P11260 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC5.85□□□□□ -1.47
Lire1P11260 Agtr1b-202ENSMUST00000163776 1633 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Lire1P11260 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
Lire1P11260 Olfr725-202ENSMUST00000206920 1519 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
Lire1P11260 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
Lire1P11260 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
Lire1P11260 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Lire1P11260 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Lire1P11260 Gm15789-201ENSMUST00000118992 1359 ntBASIC5.85□□□□□ -1.47
Lire1P11260 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Lire1P11260 AC139750.1-201ENSMUST00000223962 1300 ntBASIC5.85□□□□□ -1.47
Lire1P11260 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Lire1P11260 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Lire1P11260 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Lire1P11260 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Lire1P11260 n-R5s178-201ENSMUST00000104249 114 ntBASIC5.85□□□□□ -1.47
Lire1P11260 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC5.85□□□□□ -1.47
Lire1P11260 Gm12447-201ENSMUST00000119110 470 ntBASIC5.85□□□□□ -1.47
Lire1P11260 Gm14520-201ENSMUST00000119258 387 ntBASIC5.85□□□□□ -1.47
Lire1P11260 Hspe1-ps4-201ENSMUST00000119538 286 ntBASIC5.85□□□□□ -1.47
Lire1P11260 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Lire1P11260 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Lire1P11260 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Lire1P11260 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC5.85□□□□□ -1.47
Lire1P11260 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC5.85□□□□□ -1.47
Lire1P11260 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC5.85□□□□□ -1.47
Lire1P11260 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Lire1P11260 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Lire1P11260 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Lire1P11260 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Lire1P11260 4831440E17Rik-201ENSMUST00000181942 1028 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Lire1P11260 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
Lire1P11260 Gm18447-201ENSMUST00000187501 307 ntBASIC5.85□□□□□ -1.47
Lire1P11260 Gm7266-201ENSMUST00000187999 405 ntBASIC5.85□□□□□ -1.47
Lire1P11260 Gm29650-201ENSMUST00000188485 742 ntBASIC5.85□□□□□ -1.47
Lire1P11260 Gm8241-201ENSMUST00000189286 816 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms