Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Hao2-201ENSMUST00000029464 2049 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col1a1P11087 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col1a1P11087 Klrk1-205ENSMUST00000168919 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col1a1P11087 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col1a1P11087 Gm15120-201ENSMUST00000120602 301 ntBASIC6.7□□□□□ -1.34
Col1a1P11087 Gm11507-201ENSMUST00000156462 412 ntBASIC6.7□□□□□ -1.34
Col1a1P11087 Gm19002-201ENSMUST00000192649 1012 ntBASIC6.7□□□□□ -1.34
Col1a1P11087 Gm17775-201ENSMUST00000198542 258 ntBASIC6.7□□□□□ -1.34
Col1a1P11087 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC6.7□□□□□ -1.34
Col1a1P11087 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col1a1P11087 Gm23514-201ENSMUST00000082827 130 ntBASIC6.7□□□□□ -1.34
Col1a1P11087 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Col1a1P11087 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Col1a1P11087 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col1a1P11087 LOC102637012-201ENSMUST00000217248 2562 ntBASIC6.7□□□□□ -1.34
Col1a1P11087 Olfr1299-201ENSMUST00000207228 1678 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
Col1a1P11087 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC6.7□□□□□ -1.34
Col1a1P11087 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col1a1P11087 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Col1a1P11087 Sox5-201ENSMUST00000038815 7243 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col1a1P11087 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col1a1P11087 4930516K23Rik-201ENSMUST00000074064 6133 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Col1a1P11087 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Col1a1P11087 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Col1a1P11087 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col1a1P11087 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
Col1a1P11087 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
Col1a1P11087 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Col1a1P11087 Alpk1-206ENSMUST00000198955 4498 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Col1a1P11087 Hspg2-203ENSMUST00000171332 14176 ntAPPRIS P2 TSL 5 BASIC6.69□□□□□ -1.34
Col1a1P11087 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC6.69□□□□□ -1.34
Col1a1P11087 Gm7079-201ENSMUST00000119726 171 ntBASIC6.69□□□□□ -1.34
Col1a1P11087 Gm4234-201ENSMUST00000119747 714 ntBASIC6.69□□□□□ -1.34
Col1a1P11087 Gm15480-201ENSMUST00000120442 519 ntBASIC6.69□□□□□ -1.34
Col1a1P11087 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC6.69□□□□□ -1.34
Col1a1P11087 Gm13077-201ENSMUST00000121941 484 ntBASIC6.69□□□□□ -1.34
Col1a1P11087 Olfr213-201ENSMUST00000121958 984 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Col1a1P11087 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC6.69□□□□□ -1.34
Col1a1P11087 Gm25389-201ENSMUST00000157340 286 ntBASIC6.69□□□□□ -1.34
Col1a1P11087 Gm23513-201ENSMUST00000158181 133 ntBASIC6.69□□□□□ -1.34
Col1a1P11087 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC6.69□□□□□ -1.34
Col1a1P11087 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col1a1P11087 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Col1a1P11087 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col1a1P11087 Gm26911-202ENSMUST00000204244 763 ntTSL 5 BASIC6.69□□□□□ -1.34
Col1a1P11087 1700129C05Rik-201ENSMUST00000022548 1067 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col1a1P11087 AC154436.2-201ENSMUST00000227408 208 ntBASIC6.69□□□□□ -1.34
Col1a1P11087 Anapc13-201ENSMUST00000038673 411 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Col1a1P11087 Gm7887-201ENSMUST00000056948 537 ntBASIC6.69□□□□□ -1.34
Col1a1P11087 Gm15500-201ENSMUST00000071523 894 ntBASIC6.69□□□□□ -1.34
Col1a1P11087 Ube2d4-201ENSMUST00000075109 406 ntTSL 5 BASIC6.69□□□□□ -1.34
Col1a1P11087 Mir342-201ENSMUST00000083502 99 ntBASIC6.69□□□□□ -1.34
Col1a1P11087 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col1a1P11087 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC6.69□□□□□ -1.34
Col1a1P11087 Gm38372-201ENSMUST00000194854 4028 ntBASIC6.69□□□□□ -1.34
Col1a1P11087 Obox3-201ENSMUST00000086122 1890 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Col1a1P11087 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col1a1P11087 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC6.69□□□□□ -1.34
Col1a1P11087 Olfr527-202ENSMUST00000214143 3094 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Col1a1P11087 AC120153.1-201ENSMUST00000226502 1311 ntBASIC6.69□□□□□ -1.34
Col1a1P11087 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Col1a1P11087 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Col1a1P11087 Fam49a-202ENSMUST00000069066 9452 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col1a1P11087 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col1a1P11087 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Col1a1P11087 Gm45520-201ENSMUST00000210109 2031 ntBASIC6.68□□□□□ -1.34
Col1a1P11087 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col1a1P11087 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC6.68□□□□□ -1.34
Col1a1P11087 Gm13469-201ENSMUST00000118231 350 ntBASIC6.68□□□□□ -1.34
Col1a1P11087 H3f3c-201ENSMUST00000119459 411 ntBASIC6.68□□□□□ -1.34
Col1a1P11087 Gm15803-201ENSMUST00000120118 394 ntBASIC6.68□□□□□ -1.34
Col1a1P11087 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC6.68□□□□□ -1.34
Col1a1P11087 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Col1a1P11087 Gm25962-201ENSMUST00000157173 168 ntBASIC6.68□□□□□ -1.34
Col1a1P11087 Gm24685-201ENSMUST00000157764 285 ntBASIC6.68□□□□□ -1.34
Col1a1P11087 Mir6963-201ENSMUST00000183535 71 ntBASIC6.68□□□□□ -1.34
Col1a1P11087 Mir7031-201ENSMUST00000183860 65 ntBASIC6.68□□□□□ -1.34
Col1a1P11087 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC6.68□□□□□ -1.34
Col1a1P11087 Ighv5-21-201ENSMUST00000191935 295 ntBASIC6.68□□□□□ -1.34
Col1a1P11087 Gm6702-201ENSMUST00000208496 471 ntBASIC6.68□□□□□ -1.34
Col1a1P11087 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC6.68□□□□□ -1.34
Col1a1P11087 AC153153.2-201ENSMUST00000223572 411 ntBASIC6.68□□□□□ -1.34
Col1a1P11087 AC154626.1-201ENSMUST00000226070 311 ntBASIC6.68□□□□□ -1.34
Col1a1P11087 AC154657.1-201ENSMUST00000226394 775 ntBASIC6.68□□□□□ -1.34
Col1a1P11087 Olfr866-201ENSMUST00000062248 1077 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Col1a1P11087 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Col1a1P11087 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col1a1P11087 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
Col1a1P11087 1700007F19Rik-201ENSMUST00000188418 1642 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Col1a1P11087 Adam21-201ENSMUST00000008582 2911 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col1a1P11087 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col1a1P11087 AC022682.2-202ENSMUST00000224394 3943 ntBASIC6.68□□□□□ -1.34
Col1a1P11087 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col1a1P11087 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC6.68□□□□□ -1.34
Col1a1P11087 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC6.68□□□□□ -1.34
Col1a1P11087 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC6.68□□□□□ -1.34
Col1a1P11087 Gm37875-201ENSMUST00000192101 1498 ntTSL 5 BASIC6.68□□□□□ -1.34
Col1a1P11087 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC6.68□□□□□ -1.34
Col1a1P11087 Gal3st2c-201ENSMUST00000097632 9667 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col1a1P11087 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 94.1 ms