Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 4933431E20Rik-206ENSMUST00000138472 483 ntTSL 5 BASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 Gm16725-201ENSMUST00000138744 1253 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 Gm22235-201ENSMUST00000157085 110 ntBASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 Gm26183-201ENSMUST00000157685 139 ntBASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 Gm25180-201ENSMUST00000157746 115 ntBASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 Gm42936-201ENSMUST00000174019 652 ntTSL 3 BASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 Mir5100-201ENSMUST00000174993 64 ntBASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 Gm26652-202ENSMUST00000181672 475 ntBASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 7630403G23Rik-201ENSMUST00000184229 1084 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 1700104B16Rik-202ENSMUST00000187948 722 ntTSL 2 BASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 Gm6472-202ENSMUST00000187973 582 ntBASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 Gm4785-201ENSMUST00000191025 751 ntBASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 Gm38373-201ENSMUST00000192042 288 ntBASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 Gm33370-201ENSMUST00000195935 489 ntTSL 2 BASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 Gm43655-201ENSMUST00000197367 222 ntBASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 Gm43608-201ENSMUST00000197703 687 ntTSL 3 BASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 Gm19104-201ENSMUST00000198392 679 ntBASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 Gm44050-201ENSMUST00000204263 527 ntBASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 Gm44724-203ENSMUST00000208430 998 ntTSL 5 BASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 Gm45100-201ENSMUST00000209153 391 ntBASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 Gm9685-201ENSMUST00000211275 538 ntBASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 Gm6906-201ENSMUST00000218014 569 ntBASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 AC116502.1-201ENSMUST00000220989 291 ntBASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 AC164116.1-201ENSMUST00000225810 622 ntBASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 AC159267.1-201ENSMUST00000226702 678 ntBASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 AC115735.3-201ENSMUST00000227757 513 ntBASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 Olfr1360-201ENSMUST00000079135 980 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 Gm23407-201ENSMUST00000082538 91 ntBASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 n-R5s29-201ENSMUST00000082836 119 ntBASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 Gm42513-201ENSMUST00000197831 2119 ntBASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 Gm8401-201ENSMUST00000120248 1739 ntBASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 Robo2-210ENSMUST00000226478 8059 ntBASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 Fetub-202ENSMUST00000116625 1338 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 Gm6327-201ENSMUST00000171185 1335 ntBASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 Gm37936-201ENSMUST00000194647 1322 ntBASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 Gm37959-201ENSMUST00000191700 2897 ntBASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 4930517E11Rik-201ENSMUST00000129584 1457 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Pcdh1F7BJK1 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Gm14895-201ENSMUST00000121858 1361 ntBASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 5330411O13Rik-201ENSMUST00000205759 1544 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 AC154630.1-201ENSMUST00000215334 2440 ntBASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Ifna14-201ENSMUST00000102808 570 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Gm23437-201ENSMUST00000104036 127 ntBASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Gm25724-201ENSMUST00000104531 117 ntBASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Gm2348-201ENSMUST00000108782 300 ntBASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Cd200r3-204ENSMUST00000114612 731 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Gm11864-201ENSMUST00000116179 1220 ntBASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Serpina3h-202ENSMUST00000116393 1226 ntBASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Gm14865-201ENSMUST00000117523 494 ntBASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Gm14624-201ENSMUST00000117746 192 ntBASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Gm13463-201ENSMUST00000119020 233 ntBASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Gm11689-201ENSMUST00000120766 302 ntBASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Gm11965-201ENSMUST00000122017 277 ntBASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Tbata-207ENSMUST00000140456 953 ntTSL 5 BASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Gm13662-201ENSMUST00000157059 712 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Gm7244-201ENSMUST00000164658 455 ntBASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Gm2855-201ENSMUST00000166765 456 ntBASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Gm7651-201ENSMUST00000173398 901 ntBASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Gm20691-201ENSMUST00000176889 333 ntBASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Gm21698-201ENSMUST00000178487 666 ntTSL 5 BASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 n-R5s109-201ENSMUST00000179195 119 ntBASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Mir7058-201ENSMUST00000184637 75 ntBASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Gm29483-201ENSMUST00000188188 1078 ntTSL 3 BASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 Smpx-208ENSMUST00000190091 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Pcdh1F7BJK1 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms