Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 1700016P04Rik-201ENSMUST00000186770 429 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Ube3bQ9ES34 Gm36935-201ENSMUST00000192526 292 ntBASIC8.32□□□□□ -1.08
Ube3bQ9ES34 Gm18752-201ENSMUST00000192876 608 ntBASIC8.32□□□□□ -1.08
Ube3bQ9ES34 Gm43510-201ENSMUST00000197922 353 ntBASIC8.32□□□□□ -1.08
Ube3bQ9ES34 Gm2314-201ENSMUST00000200391 586 ntBASIC8.32□□□□□ -1.08
Ube3bQ9ES34 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Ube3bQ9ES34 Olfr494-202ENSMUST00000210291 947 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Ube3bQ9ES34 Gm8667-201ENSMUST00000211112 449 ntBASIC8.32□□□□□ -1.08
Ube3bQ9ES34 Gm2774-201ENSMUST00000213650 1165 ntBASIC8.32□□□□□ -1.08
Ube3bQ9ES34 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC8.32□□□□□ -1.08
Ube3bQ9ES34 Ctla2b-201ENSMUST00000021884 842 ntAPPRIS P4 TSL 1 (best) BASIC8.32□□□□□ -1.08
Ube3bQ9ES34 Gm25005-201ENSMUST00000083812 156 ntBASIC8.32□□□□□ -1.08
Ube3bQ9ES34 Olfr1278-201ENSMUST00000090330 942 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Ube3bQ9ES34 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Ube3bQ9ES34 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Ube3bQ9ES34 AC159195.2-201ENSMUST00000223670 3757 ntBASIC8.32□□□□□ -1.08
Ube3bQ9ES34 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Ube3bQ9ES34 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Ube3bQ9ES34 Gm37457-201ENSMUST00000193639 2433 ntBASIC8.32□□□□□ -1.08
Ube3bQ9ES34 Ctnnd1-201ENSMUST00000036811 5126 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Ube3bQ9ES34 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Ube3bQ9ES34 Abi1-202ENSMUST00000091394 3023 ntAPPRIS ALT1 TSL 5 BASIC8.32□□□□□ -1.08
Ube3bQ9ES34 Gm28322-201ENSMUST00000185627 1475 ntBASIC8.32□□□□□ -1.08
Ube3bQ9ES34 AC135119.1-202ENSMUST00000228435 2203 ntBASIC8.31□□□□□ -1.08
Ube3bQ9ES34 CT010514.1-201ENSMUST00000214088 2969 ntBASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Vmn2r114-201ENSMUST00000168033 2571 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Gm42898-201ENSMUST00000200370 3073 ntBASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Slc8a1-203ENSMUST00000163680 2913 ntAPPRIS ALT1 TSL 5 BASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Slc8a1-201ENSMUST00000086538 2913 ntAPPRIS P2 TSL 5 BASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Ccser1-201ENSMUST00000045522 2688 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Kdm5d-207ENSMUST00000189069 2177 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Iqch-202ENSMUST00000080527 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Gm15813-201ENSMUST00000142286 2541 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Olfr1426-202ENSMUST00000208703 2546 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Lrrc40-201ENSMUST00000072080 4142 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ube3bQ9ES34 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Gm24273-201ENSMUST00000102332 164 ntBASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Mir297a-2-201ENSMUST00000103795 90 ntBASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Gm25093-201ENSMUST00000103993 132 ntBASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Ube3bQ9ES34 B4galt4-202ENSMUST00000114708 734 ntTSL 2 BASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Gm9427-201ENSMUST00000116187 651 ntBASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Gm11581-201ENSMUST00000122024 763 ntBASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Gm16248-201ENSMUST00000124238 243 ntBASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Gm3757-201ENSMUST00000125878 675 ntBASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Tmem132cos-202ENSMUST00000154361 699 ntTSL 3 BASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Gm25559-201ENSMUST00000157182 74 ntBASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Gm9359-201ENSMUST00000163721 1221 ntBASIC8.31□□□□□ -1.08
Ube3bQ9ES34 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Gm42421-201ENSMUST00000172367 719 ntAPPRIS P1 TSL 3 BASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Gm24418-201ENSMUST00000177597 79 ntBASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Gm24639-201ENSMUST00000178518 79 ntBASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Gm23076-201ENSMUST00000179082 79 ntBASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Gm25077-201ENSMUST00000179157 79 ntBASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Gm29483-201ENSMUST00000188188 1078 ntTSL 3 BASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC8.31□□□□□ -1.08
Ube3bQ9ES34 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Gm37620-201ENSMUST00000192910 501 ntBASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Gm43786-202ENSMUST00000202157 616 ntTSL 3 BASIC8.31□□□□□ -1.08
Ube3bQ9ES34 1700019F05Rik-201ENSMUST00000202487 533 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Gm44411-201ENSMUST00000204172 349 ntBASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Gm43922-201ENSMUST00000205071 328 ntBASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC8.31□□□□□ -1.08
Ube3bQ9ES34 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Gm17987-201ENSMUST00000206902 603 ntBASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Gm5119-201ENSMUST00000215858 634 ntBASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Gm18557-201ENSMUST00000218710 433 ntBASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Gm4057-201ENSMUST00000221407 368 ntBASIC8.31□□□□□ -1.08
Ube3bQ9ES34 CT030170.6-203ENSMUST00000222523 1295 ntTSL 5 BASIC8.31□□□□□ -1.08
Ube3bQ9ES34 AC150661.1-201ENSMUST00000222563 495 ntBASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Gm34552-201ENSMUST00000223381 636 ntTSL 5 BASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Olfr1378-201ENSMUST00000052285 948 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Gm6455-201ENSMUST00000095015 1072 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Gm37877-201ENSMUST00000191630 2709 ntBASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Gm36933-201ENSMUST00000194945 3071 ntBASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Gm44101-201ENSMUST00000203951 2221 ntBASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Olfr239-203ENSMUST00000214406 3773 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Gm9268-202ENSMUST00000173815 2565 ntAPPRIS P2 TSL 5 BASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Ube3bQ9ES34 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms