Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Lima1Q9ERG0 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Lima1Q9ERG0 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Lima1Q9ERG0 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
Lima1Q9ERG0 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.51
Lima1Q9ERG0 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.52
Lima1Q9ERG0 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Lima1Q9ERG0 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC5.59□□□□□ -1.52
Lima1Q9ERG0 Gm26791-201ENSMUST00000180942 1605 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Lima1Q9ERG0 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
Lima1Q9ERG0 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
Lima1Q9ERG0 Papola-215ENSMUST00000170002 2605 ntTSL 5 BASIC5.59□□□□□ -1.52
Lima1Q9ERG0 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
Lima1Q9ERG0 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
Lima1Q9ERG0 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Lima1Q9ERG0 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Lima1Q9ERG0 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Lima1Q9ERG0 Gm17175-201ENSMUST00000172117 1403 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Lima1Q9ERG0 B130034C11Rik-201ENSMUST00000175717 1401 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Lima1Q9ERG0 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Lima1Q9ERG0 Gm19210-201ENSMUST00000199562 1350 ntBASIC5.58□□□□□ -1.52
Lima1Q9ERG0 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Lima1Q9ERG0 Gm11699-201ENSMUST00000119016 401 ntBASIC5.58□□□□□ -1.52
Lima1Q9ERG0 Gm7658-201ENSMUST00000119064 1124 ntBASIC5.58□□□□□ -1.52
Lima1Q9ERG0 Gm5405-201ENSMUST00000120478 609 ntBASIC5.58□□□□□ -1.52
Lima1Q9ERG0 Gm13531-201ENSMUST00000121893 543 ntBASIC5.58□□□□□ -1.52
Lima1Q9ERG0 Gm14970-201ENSMUST00000122289 355 ntBASIC5.58□□□□□ -1.52
Lima1Q9ERG0 Mettl4-ps1-201ENSMUST00000127676 1272 ntBASIC5.58□□□□□ -1.52
Lima1Q9ERG0 2310081O03Rik-201ENSMUST00000128591 759 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Lima1Q9ERG0 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Lima1Q9ERG0 Gm25387-201ENSMUST00000157813 132 ntBASIC5.58□□□□□ -1.52
Lima1Q9ERG0 Gm9671-201ENSMUST00000171502 547 ntBASIC5.58□□□□□ -1.52
Lima1Q9ERG0 Mir5128-201ENSMUST00000175217 84 ntBASIC5.58□□□□□ -1.52
Lima1Q9ERG0 Mdrl-201ENSMUST00000180483 1020 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Lima1Q9ERG0 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Lima1Q9ERG0 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC5.58□□□□□ -1.52
Lima1Q9ERG0 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Lima1Q9ERG0 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Lima1Q9ERG0 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC5.58□□□□□ -1.52
Lima1Q9ERG0 7530428D23Rik-201ENSMUST00000191725 765 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Lima1Q9ERG0 Gm17952-201ENSMUST00000193914 747 ntBASIC5.58□□□□□ -1.52
Lima1Q9ERG0 Gm44494-201ENSMUST00000196760 129 ntBASIC5.58□□□□□ -1.52
Lima1Q9ERG0 Gm44219-201ENSMUST00000203005 273 ntBASIC5.58□□□□□ -1.52
Lima1Q9ERG0 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC5.58□□□□□ -1.52
Lima1Q9ERG0 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC5.58□□□□□ -1.52
Lima1Q9ERG0 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC5.58□□□□□ -1.52
Lima1Q9ERG0 4930591E09Rik-201ENSMUST00000215643 480 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Lima1Q9ERG0 Tespa1-202ENSMUST00000217702 1102 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Lima1Q9ERG0 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC5.58□□□□□ -1.52
Lima1Q9ERG0 AC161252.1-201ENSMUST00000225536 467 ntBASIC5.58□□□□□ -1.52
Lima1Q9ERG0 AC170810.1-201ENSMUST00000228267 672 ntBASIC5.58□□□□□ -1.52
Lima1Q9ERG0 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Lima1Q9ERG0 Rps26-ps1-201ENSMUST00000077208 449 ntBASIC5.58□□□□□ -1.52
Lima1Q9ERG0 Olfr313-201ENSMUST00000082220 1074 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Lima1Q9ERG0 BC061237-201ENSMUST00000096899 899 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Lima1Q9ERG0 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC5.58□□□□□ -1.52
Lima1Q9ERG0 Olfr380-202ENSMUST00000121209 1669 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
Lima1Q9ERG0 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC5.58□□□□□ -1.52
Lima1Q9ERG0 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Lima1Q9ERG0 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
Lima1Q9ERG0 Gm36936-201ENSMUST00000194508 2749 ntBASIC5.58□□□□□ -1.52
Lima1Q9ERG0 Gm8750-201ENSMUST00000173278 1537 ntBASIC5.58□□□□□ -1.52
Lima1Q9ERG0 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Lima1Q9ERG0 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Lima1Q9ERG0 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Lima1Q9ERG0 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Lima1Q9ERG0 Gm37212-201ENSMUST00000192582 3650 ntBASIC5.58□□□□□ -1.52
Lima1Q9ERG0 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Lima1Q9ERG0 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC5.58□□□□□ -1.52
Lima1Q9ERG0 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Lima1Q9ERG0 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Lima1Q9ERG0 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Lima1Q9ERG0 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Lima1Q9ERG0 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Lima1Q9ERG0 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Lima1Q9ERG0 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Lima1Q9ERG0 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Lima1Q9ERG0 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Lima1Q9ERG0 Gm19125-201ENSMUST00000188408 1383 ntBASIC5.57□□□□□ -1.52
Lima1Q9ERG0 AC117608.2-201ENSMUST00000224124 1363 ntBASIC5.57□□□□□ -1.52
Lima1Q9ERG0 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Lima1Q9ERG0 Gm4973-201ENSMUST00000206925 1334 ntBASIC5.57□□□□□ -1.52
Lima1Q9ERG0 Gm43567-201ENSMUST00000197581 1978 ntBASIC5.57□□□□□ -1.52
Lima1Q9ERG0 Gm43258-201ENSMUST00000200312 1950 ntBASIC5.57□□□□□ -1.52
Lima1Q9ERG0 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Lima1Q9ERG0 Gm24434-201ENSMUST00000104081 132 ntBASIC5.57□□□□□ -1.52
Lima1Q9ERG0 Gm42674-201ENSMUST00000107330 446 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
Lima1Q9ERG0 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Lima1Q9ERG0 Gm12131-201ENSMUST00000117479 359 ntBASIC5.57□□□□□ -1.52
Lima1Q9ERG0 Gm13835-201ENSMUST00000118459 685 ntBASIC5.57□□□□□ -1.52
Lima1Q9ERG0 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC5.57□□□□□ -1.52
Lima1Q9ERG0 1700057H21Rik-201ENSMUST00000152467 383 ntTSL 5 BASIC5.57□□□□□ -1.52
Lima1Q9ERG0 Gm24741-201ENSMUST00000158857 106 ntBASIC5.57□□□□□ -1.52
Lima1Q9ERG0 Gm24179-201ENSMUST00000158925 127 ntBASIC5.57□□□□□ -1.52
Lima1Q9ERG0 Gm16125-201ENSMUST00000159003 339 ntBASIC5.57□□□□□ -1.52
Lima1Q9ERG0 Gm17137-202ENSMUST00000165729 957 ntBASIC5.57□□□□□ -1.52
Lima1Q9ERG0 Gm22650-201ENSMUST00000175138 105 ntBASIC5.57□□□□□ -1.52
Lima1Q9ERG0 Vmn2r-ps12-201ENSMUST00000175833 623 ntBASIC5.57□□□□□ -1.52
Lima1Q9ERG0 Gm37177-201ENSMUST00000193768 417 ntBASIC5.57□□□□□ -1.52
Lima1Q9ERG0 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC5.57□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 111.3 ms