Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm25439-201ENSMUST00000158280 131 ntBASIC5.41□□□□□ -1.54
Cdc40Q9DC48 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Cdc40Q9DC48 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC5.41□□□□□ -1.54
Cdc40Q9DC48 Gm37375-201ENSMUST00000193859 387 ntBASIC5.41□□□□□ -1.54
Cdc40Q9DC48 Gm37385-201ENSMUST00000195223 387 ntBASIC5.41□□□□□ -1.54
Cdc40Q9DC48 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC5.41□□□□□ -1.54
Cdc40Q9DC48 Oaz3-204ENSMUST00000199678 935 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Cdc40Q9DC48 Gm43798-201ENSMUST00000202056 394 ntBASIC5.41□□□□□ -1.54
Cdc40Q9DC48 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC5.41□□□□□ -1.54
Cdc40Q9DC48 Gm46223-201ENSMUST00000215196 675 ntBASIC5.41□□□□□ -1.54
Cdc40Q9DC48 AC159886.1-201ENSMUST00000217099 1091 ntBASIC5.41□□□□□ -1.54
Cdc40Q9DC48 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Cdc40Q9DC48 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC5.41□□□□□ -1.54
Cdc40Q9DC48 Gm6068-201ENSMUST00000222270 387 ntBASIC5.41□□□□□ -1.54
Cdc40Q9DC48 Gm18940-201ENSMUST00000222518 871 ntBASIC5.41□□□□□ -1.54
Cdc40Q9DC48 AC107711.2-203ENSMUST00000227827 762 ntBASIC5.41□□□□□ -1.54
Cdc40Q9DC48 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Cdc40Q9DC48 Olfr146-201ENSMUST00000073671 1061 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Cdc40Q9DC48 Gm8412-201ENSMUST00000077493 440 ntBASIC5.41□□□□□ -1.54
Cdc40Q9DC48 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Cdc40Q9DC48 Vmn1r168-201ENSMUST00000098704 930 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Cdc40Q9DC48 Olfr49-202ENSMUST00000216214 5717 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Cdc40Q9DC48 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Cdc40Q9DC48 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Cdc40Q9DC48 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Cdc40Q9DC48 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Cdc40Q9DC48 Cfap70-201ENSMUST00000022348 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Cdc40Q9DC48 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Cdc40Q9DC48 Zfp605-201ENSMUST00000086686 2085 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
Cdc40Q9DC48 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Cdc40Q9DC48 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Cdc40Q9DC48 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Cdc40Q9DC48 Gm38062-201ENSMUST00000192541 1856 ntBASIC5.41□□□□□ -1.54
Cdc40Q9DC48 Gm43180-201ENSMUST00000197541 2886 ntBASIC5.41□□□□□ -1.54
Cdc40Q9DC48 Gm42397-206ENSMUST00000208808 1358 ntTSL 5 BASIC5.41□□□□□ -1.54
Cdc40Q9DC48 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC5.41□□□□□ -1.54
Cdc40Q9DC48 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Cdc40Q9DC48 AC105407.2-201ENSMUST00000223707 3911 ntBASIC5.41□□□□□ -1.54
Cdc40Q9DC48 CT009733.2-202ENSMUST00000224171 4748 ntBASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC5.4□□□□□ -1.54
Cdc40Q9DC48 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Gm45548-201ENSMUST00000210076 3167 ntBASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Gm8750-201ENSMUST00000173278 1537 ntBASIC5.4□□□□□ -1.54
Cdc40Q9DC48 BC030870-201ENSMUST00000098713 1507 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Trbv13-2-201ENSMUST00000103270 340 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Gm11105-201ENSMUST00000112781 478 ntBASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Usp17le-ps-201ENSMUST00000117954 957 ntBASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Mrps36-ps2-201ENSMUST00000118658 309 ntBASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Gm6744-201ENSMUST00000119303 543 ntBASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Gm15331-201ENSMUST00000120225 385 ntBASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Gm15801-201ENSMUST00000120920 522 ntBASIC5.4□□□□□ -1.54
Cdc40Q9DC48 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Gm15819-201ENSMUST00000153089 481 ntTSL 2 BASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Gm22724-201ENSMUST00000158091 127 ntBASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Gm25363-201ENSMUST00000158850 245 ntBASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Gm8783-201ENSMUST00000159764 522 ntBASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Tmem258-204ENSMUST00000166412 447 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Gm21772-201ENSMUST00000169213 478 ntBASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Gm17126-201ENSMUST00000172276 523 ntBASIC5.4□□□□□ -1.54
Cdc40Q9DC48 1700003H04Rik-206ENSMUST00000180162 1086 ntAPPRIS P5 TSL 5 BASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Gm27193-201ENSMUST00000184217 586 ntBASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Gm37341-201ENSMUST00000194680 371 ntBASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Gm43467-201ENSMUST00000197441 437 ntBASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Gm42619-201ENSMUST00000197564 1136 ntBASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Gm29736-201ENSMUST00000198189 385 ntBASIC5.4□□□□□ -1.54
Cdc40Q9DC48 Gm7181-201ENSMUST00000202197 434 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms