Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Olfr947-ps1-202ENSMUST00000214936 2168 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
Smc1aQ9CU62 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Smc1aQ9CU62 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Smc1aQ9CU62 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Smc1aQ9CU62 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Smc1aQ9CU62 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Smc1aQ9CU62 Olfr916-202ENSMUST00000213714 1380 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Smc1aQ9CU62 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Smc1aQ9CU62 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Smc1aQ9CU62 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC6.55□□□□□ -1.36
Smc1aQ9CU62 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Smc1aQ9CU62 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Smc1aQ9CU62 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Smc1aQ9CU62 Olfr1392-203ENSMUST00000214170 3507 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Smc1aQ9CU62 Olfr1392-205ENSMUST00000214598 3506 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Smc1aQ9CU62 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Smc1aQ9CU62 Gm29438-201ENSMUST00000191298 2613 ntBASIC6.54□□□□□ -1.36
Smc1aQ9CU62 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Smc1aQ9CU62 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Smc1aQ9CU62 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Smc1aQ9CU62 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Smc1aQ9CU62 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Smc1aQ9CU62 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
Smc1aQ9CU62 Gm15073-201ENSMUST00000117432 634 ntBASIC6.54□□□□□ -1.36
Smc1aQ9CU62 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Smc1aQ9CU62 Gm13013-201ENSMUST00000119087 523 ntBASIC6.54□□□□□ -1.36
Smc1aQ9CU62 Gm15801-201ENSMUST00000120920 522 ntBASIC6.54□□□□□ -1.36
Smc1aQ9CU62 Olfr408-ps1-201ENSMUST00000121710 941 ntBASIC6.54□□□□□ -1.36
Smc1aQ9CU62 Gm8061-201ENSMUST00000122380 350 ntBASIC6.54□□□□□ -1.36
Smc1aQ9CU62 Gm8783-201ENSMUST00000159764 522 ntBASIC6.54□□□□□ -1.36
Smc1aQ9CU62 Gm8582-201ENSMUST00000164061 789 ntBASIC6.54□□□□□ -1.36
Smc1aQ9CU62 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Smc1aQ9CU62 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Smc1aQ9CU62 Gm29489-201ENSMUST00000188934 324 ntBASIC6.54□□□□□ -1.36
Smc1aQ9CU62 Gm19104-201ENSMUST00000198392 679 ntBASIC6.54□□□□□ -1.36
Smc1aQ9CU62 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Smc1aQ9CU62 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC6.54□□□□□ -1.36
Smc1aQ9CU62 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC6.54□□□□□ -1.36
Smc1aQ9CU62 Gm18863-201ENSMUST00000217004 1299 ntBASIC6.54□□□□□ -1.36
Smc1aQ9CU62 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC6.54□□□□□ -1.36
Smc1aQ9CU62 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Smc1aQ9CU62 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC6.54□□□□□ -1.36
Smc1aQ9CU62 Prl8a8-204ENSMUST00000224072 1128 ntAPPRIS ALT2 BASIC6.54□□□□□ -1.36
Smc1aQ9CU62 AC154595.2-201ENSMUST00000225067 310 ntBASIC6.54□□□□□ -1.36
Smc1aQ9CU62 AC170999.2-201ENSMUST00000226223 264 ntBASIC6.54□□□□□ -1.36
Smc1aQ9CU62 Olfr309-201ENSMUST00000055690 927 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Smc1aQ9CU62 Olfr1023-201ENSMUST00000056408 936 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Smc1aQ9CU62 Olfr934-201ENSMUST00000074211 933 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Smc1aQ9CU62 Gm5582-201ENSMUST00000075251 522 ntBASIC6.54□□□□□ -1.36
Smc1aQ9CU62 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Smc1aQ9CU62 Gm43386-201ENSMUST00000199654 4001 ntBASIC6.54□□□□□ -1.36
Smc1aQ9CU62 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Smc1aQ9CU62 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Smc1aQ9CU62 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Smc1aQ9CU62 Gm43360-201ENSMUST00000197656 2887 ntBASIC6.54□□□□□ -1.36
Smc1aQ9CU62 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Smc1aQ9CU62 Gm43282-201ENSMUST00000201848 2157 ntBASIC6.54□□□□□ -1.36
Smc1aQ9CU62 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Smc1aQ9CU62 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Smc1aQ9CU62 CT030159.1-201ENSMUST00000221580 2261 ntBASIC6.53□□□□□ -1.36
Smc1aQ9CU62 P2ry12-201ENSMUST00000050360 2250 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Smc1aQ9CU62 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Smc1aQ9CU62 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Smc1aQ9CU62 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Smc1aQ9CU62 Zfp994-201ENSMUST00000179996 4880 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Smc1aQ9CU62 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Smc1aQ9CU62 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Smc1aQ9CU62 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC6.53□□□□□ -1.36
Smc1aQ9CU62 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC6.53□□□□□ -1.36
Smc1aQ9CU62 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC6.53□□□□□ -1.36
Smc1aQ9CU62 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Smc1aQ9CU62 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC6.53□□□□□ -1.36
Smc1aQ9CU62 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Smc1aQ9CU62 Gm13193-201ENSMUST00000117275 225 ntBASIC6.53□□□□□ -1.36
Smc1aQ9CU62 Olfr407-ps1-201ENSMUST00000117794 866 ntBASIC6.53□□□□□ -1.36
Smc1aQ9CU62 Gm13818-201ENSMUST00000119441 511 ntBASIC6.53□□□□□ -1.36
Smc1aQ9CU62 Olfr360-201ENSMUST00000120704 954 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Smc1aQ9CU62 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC6.53□□□□□ -1.36
Smc1aQ9CU62 Gm17198-201ENSMUST00000171792 1154 ntBASIC6.53□□□□□ -1.36
Smc1aQ9CU62 Gm4845-201ENSMUST00000179202 562 ntBASIC6.53□□□□□ -1.36
Smc1aQ9CU62 Gm7713-201ENSMUST00000181201 1007 ntBASIC6.53□□□□□ -1.36
Smc1aQ9CU62 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC6.53□□□□□ -1.36
Smc1aQ9CU62 Gm26653-201ENSMUST00000181537 1214 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Smc1aQ9CU62 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Smc1aQ9CU62 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Smc1aQ9CU62 Gm4322-201ENSMUST00000191094 336 ntBASIC6.53□□□□□ -1.36
Smc1aQ9CU62 Gm37265-201ENSMUST00000191698 885 ntBASIC6.53□□□□□ -1.36
Smc1aQ9CU62 Gm37581-201ENSMUST00000192371 988 ntBASIC6.53□□□□□ -1.36
Smc1aQ9CU62 Gm2979-201ENSMUST00000193442 463 ntBASIC6.53□□□□□ -1.36
Smc1aQ9CU62 Gm42504-201ENSMUST00000198312 525 ntTSL 3 BASIC6.53□□□□□ -1.36
Smc1aQ9CU62 Gm43743-202ENSMUST00000198353 491 ntBASIC6.53□□□□□ -1.36
Smc1aQ9CU62 Gm42646-201ENSMUST00000202233 914 ntBASIC6.53□□□□□ -1.36
Smc1aQ9CU62 Gm34149-201ENSMUST00000203547 304 ntBASIC6.53□□□□□ -1.36
Smc1aQ9CU62 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC6.53□□□□□ -1.36
Smc1aQ9CU62 Gm39336-201ENSMUST00000214933 260 ntTSL 3 BASIC6.53□□□□□ -1.36
Smc1aQ9CU62 AC124426.2-201ENSMUST00000220886 404 ntTSL 5 BASIC6.53□□□□□ -1.36
Smc1aQ9CU62 AC159622.2-201ENSMUST00000221592 983 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Smc1aQ9CU62 AC099934.5-201ENSMUST00000222699 945 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Smc1aQ9CU62 Olfr1336-201ENSMUST00000056120 945 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Smc1aQ9CU62 Olfr994-201ENSMUST00000099925 945 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 95 ms