Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm28225-201ENSMUST00000187730 1499 ntTSL 5 BASIC5.42□□□□□ -1.54
Use1Q9CQ56 Gm29569-202ENSMUST00000187955 1499 ntTSL 5 BASIC5.42□□□□□ -1.54
Use1Q9CQ56 Gm29625-201ENSMUST00000188079 1499 ntTSL 5 BASIC5.42□□□□□ -1.54
Use1Q9CQ56 Gm28735-202ENSMUST00000188159 1499 ntTSL 5 BASIC5.42□□□□□ -1.54
Use1Q9CQ56 Gm29297-202ENSMUST00000188186 1499 ntTSL 5 BASIC5.42□□□□□ -1.54
Use1Q9CQ56 Gm29457-201ENSMUST00000188224 1499 ntTSL 5 BASIC5.42□□□□□ -1.54
Use1Q9CQ56 Gm29190-201ENSMUST00000188255 1499 ntTSL 5 BASIC5.42□□□□□ -1.54
Use1Q9CQ56 Gm28236-203ENSMUST00000188311 1499 ntTSL 5 BASIC5.42□□□□□ -1.54
Use1Q9CQ56 Gm28197-203ENSMUST00000188434 1499 ntTSL 5 BASIC5.42□□□□□ -1.54
Use1Q9CQ56 Gm29070-202ENSMUST00000188541 1499 ntTSL 5 BASIC5.42□□□□□ -1.54
Use1Q9CQ56 Gm28545-201ENSMUST00000188667 1499 ntTSL 5 BASIC5.42□□□□□ -1.54
Use1Q9CQ56 Gm29265-201ENSMUST00000188697 1499 ntTSL 5 BASIC5.42□□□□□ -1.54
Use1Q9CQ56 Gm28947-203ENSMUST00000188701 1499 ntTSL 5 BASIC5.42□□□□□ -1.54
Use1Q9CQ56 Gm29616-201ENSMUST00000188777 1499 ntTSL 5 BASIC5.42□□□□□ -1.54
Use1Q9CQ56 Gm29162-202ENSMUST00000188893 1499 ntTSL 5 BASIC5.42□□□□□ -1.54
Use1Q9CQ56 Gm28606-201ENSMUST00000188938 1499 ntTSL 5 BASIC5.42□□□□□ -1.54
Use1Q9CQ56 Gm29338-201ENSMUST00000189318 1499 ntTSL 5 BASIC5.42□□□□□ -1.54
Use1Q9CQ56 Gm29425-202ENSMUST00000189421 1499 ntTSL 5 BASIC5.42□□□□□ -1.54
Use1Q9CQ56 Gm29271-203ENSMUST00000189943 1499 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Use1Q9CQ56 Gm29381-201ENSMUST00000190168 1497 ntTSL 5 BASIC5.42□□□□□ -1.54
Use1Q9CQ56 Gm28454-203ENSMUST00000190183 1495 ntTSL 5 BASIC5.42□□□□□ -1.54
Use1Q9CQ56 Gm28842-202ENSMUST00000190289 1499 ntTSL 5 BASIC5.42□□□□□ -1.54
Use1Q9CQ56 Gm28259-201ENSMUST00000190319 1497 ntTSL 5 BASIC5.42□□□□□ -1.54
Use1Q9CQ56 Gm28318-203ENSMUST00000190347 1499 ntTSL 5 BASIC5.42□□□□□ -1.54
Use1Q9CQ56 Gm28633-202ENSMUST00000190867 1485 ntTSL 5 BASIC5.42□□□□□ -1.54
Use1Q9CQ56 Gm29182-202ENSMUST00000191008 1499 ntTSL 5 BASIC5.42□□□□□ -1.54
Use1Q9CQ56 Gm28632-202ENSMUST00000191193 1499 ntTSL 5 BASIC5.42□□□□□ -1.54
Use1Q9CQ56 Gm28245-203ENSMUST00000191551 1495 ntTSL 5 BASIC5.42□□□□□ -1.54
Use1Q9CQ56 Gm38370-201ENSMUST00000192545 1499 ntTSL 5 BASIC5.42□□□□□ -1.54
Use1Q9CQ56 Gm37462-201ENSMUST00000193386 1498 ntTSL 5 BASIC5.42□□□□□ -1.54
Use1Q9CQ56 Gm32114-203ENSMUST00000195759 1499 ntTSL 5 BASIC5.42□□□□□ -1.54
Use1Q9CQ56 Rsrc2-219ENSMUST00000182955 1685 ntTSL 5 BASIC5.42□□□□□ -1.54
Use1Q9CQ56 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Use1Q9CQ56 AL591843.1-201ENSMUST00000223686 3082 ntBASIC5.42□□□□□ -1.54
Use1Q9CQ56 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Use1Q9CQ56 Gm45562-201ENSMUST00000210015 1537 ntBASIC5.42□□□□□ -1.54
Use1Q9CQ56 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Use1Q9CQ56 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC5.42□□□□□ -1.54
Use1Q9CQ56 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Use1Q9CQ56 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Use1Q9CQ56 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Use1Q9CQ56 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Use1Q9CQ56 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Use1Q9CQ56 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Use1Q9CQ56 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Use1Q9CQ56 Olfr552-202ENSMUST00000215712 4206 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Use1Q9CQ56 Gm37456-201ENSMUST00000193176 5837 ntBASIC5.41□□□□□ -1.54
Use1Q9CQ56 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC5.41□□□□□ -1.54
Use1Q9CQ56 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC5.41□□□□□ -1.54
Use1Q9CQ56 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Use1Q9CQ56 Gm13768-201ENSMUST00000116469 929 ntBASIC5.41□□□□□ -1.54
Use1Q9CQ56 Gm14769-201ENSMUST00000118590 432 ntBASIC5.41□□□□□ -1.54
Use1Q9CQ56 Mgst1-205ENSMUST00000120939 913 ntTSL 3 BASIC5.41□□□□□ -1.54
Use1Q9CQ56 Gm11879-201ENSMUST00000121885 702 ntBASIC5.41□□□□□ -1.54
Use1Q9CQ56 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC5.41□□□□□ -1.54
Use1Q9CQ56 Gm16144-201ENSMUST00000131093 827 ntTSL 2 BASIC5.41□□□□□ -1.54
Use1Q9CQ56 Gm25013-201ENSMUST00000158402 128 ntBASIC5.41□□□□□ -1.54
Use1Q9CQ56 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC5.41□□□□□ -1.54
Use1Q9CQ56 Gm27348-201ENSMUST00000184511 170 ntBASIC5.41□□□□□ -1.54
Use1Q9CQ56 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC5.41□□□□□ -1.54
Use1Q9CQ56 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
Use1Q9CQ56 Gm18559-201ENSMUST00000208249 604 ntBASIC5.41□□□□□ -1.54
Use1Q9CQ56 Gm44809-201ENSMUST00000208305 993 ntBASIC5.41□□□□□ -1.54
Use1Q9CQ56 Gm18205-201ENSMUST00000209215 841 ntBASIC5.41□□□□□ -1.54
Use1Q9CQ56 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC5.41□□□□□ -1.54
Use1Q9CQ56 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC5.41□□□□□ -1.54
Use1Q9CQ56 4930455C13Rik-201ENSMUST00000218108 1018 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Use1Q9CQ56 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Use1Q9CQ56 Glt6d1-201ENSMUST00000038010 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Use1Q9CQ56 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Use1Q9CQ56 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC5.41□□□□□ -1.54
Use1Q9CQ56 Olfr1367-201ENSMUST00000059216 1055 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Use1Q9CQ56 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC5.41□□□□□ -1.54
Use1Q9CQ56 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Use1Q9CQ56 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Use1Q9CQ56 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
Use1Q9CQ56 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Use1Q9CQ56 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Use1Q9CQ56 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Use1Q9CQ56 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Use1Q9CQ56 Gm37766-201ENSMUST00000192244 2567 ntBASIC5.41□□□□□ -1.54
Use1Q9CQ56 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Use1Q9CQ56 Gm5512-201ENSMUST00000218013 1353 ntBASIC5.41□□□□□ -1.54
Use1Q9CQ56 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC5.41□□□□□ -1.54
Use1Q9CQ56 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Use1Q9CQ56 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC5.4□□□□□ -1.54
Use1Q9CQ56 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Use1Q9CQ56 Olfr380-202ENSMUST00000121209 1669 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
Use1Q9CQ56 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC5.4□□□□□ -1.54
Use1Q9CQ56 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
Use1Q9CQ56 Svs2-202ENSMUST00000109374 1479 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Use1Q9CQ56 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC5.4□□□□□ -1.54
Use1Q9CQ56 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC5.4□□□□□ -1.54
Use1Q9CQ56 Olfr1131-202ENSMUST00000213302 1779 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Use1Q9CQ56 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Use1Q9CQ56 AC133498.1-201ENSMUST00000222871 2925 ntTSL 5 BASIC5.4□□□□□ -1.54
Use1Q9CQ56 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC5.4□□□□□ -1.54
Use1Q9CQ56 Ighv14-4-201ENSMUST00000103475 333 ntAPPRIS ALT2 BASIC5.4□□□□□ -1.54
Use1Q9CQ56 Gm11561-201ENSMUST00000117429 417 ntBASIC5.4□□□□□ -1.54
Use1Q9CQ56 Gm12850-201ENSMUST00000119210 436 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms