Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Lsm1Q8VC85 AC154738.7-201ENSMUST00000228606 579 ntBASIC5.54□□□□□ -1.52
Lsm1Q8VC85 AC156016.5-201ENSMUST00000228742 355 ntBASIC5.54□□□□□ -1.52
Lsm1Q8VC85 Emc2-201ENSMUST00000022962 1231 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Lsm1Q8VC85 Olfr1491-201ENSMUST00000052737 960 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Lsm1Q8VC85 Olfr930-201ENSMUST00000058789 1101 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Lsm1Q8VC85 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Lsm1Q8VC85 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC5.54□□□□□ -1.52
Lsm1Q8VC85 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC5.54□□□□□ -1.52
Lsm1Q8VC85 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Lsm1Q8VC85 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC5.54□□□□□ -1.52
Lsm1Q8VC85 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Lsm1Q8VC85 Vmn1r36-201ENSMUST00000226142 1770 ntAPPRIS ALT2 BASIC5.54□□□□□ -1.52
Lsm1Q8VC85 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Lsm1Q8VC85 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Lsm1Q8VC85 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC5.54□□□□□ -1.52
Lsm1Q8VC85 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Gm37717-201ENSMUST00000192647 3027 ntBASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Lama2-207ENSMUST00000189575 4244 ntTSL 5 BASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Lsm1Q8VC85 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Ighv14-4-201ENSMUST00000103475 333 ntAPPRIS ALT2 BASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Gm11561-201ENSMUST00000117429 417 ntBASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Gm13114-201ENSMUST00000117605 106 ntBASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Gm11270-201ENSMUST00000117685 471 ntBASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Mgst1-205ENSMUST00000120939 913 ntTSL 3 BASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Olfr377-ps1-201ENSMUST00000134011 1136 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Gm22428-201ENSMUST00000158554 132 ntBASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Cabcoco1-202ENSMUST00000166919 1016 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Odaph-201ENSMUST00000178614 760 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Gm26820-201ENSMUST00000180764 1008 ntTSL 5 BASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Gm4832-201ENSMUST00000182679 399 ntBASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Gm26970-201ENSMUST00000182990 964 ntBASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Krtdap-203ENSMUST00000187493 420 ntTSL 2 BASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Gm28387-201ENSMUST00000189245 854 ntTSL 3 BASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Krtdap-205ENSMUST00000189673 345 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Krtdap-206ENSMUST00000189962 323 ntTSL 3 BASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Krtdap-209ENSMUST00000190990 403 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Lsm1Q8VC85 2610012C04Rik-201ENSMUST00000193434 1023 ntBASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Gm34716-201ENSMUST00000194060 621 ntTSL 5 BASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Gm30353-202ENSMUST00000195486 622 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Gm7166-201ENSMUST00000199715 303 ntBASIC5.53□□□□□ -1.52
Lsm1Q8VC85 1810017P11Rik-201ENSMUST00000202592 558 ntBASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Gm30646-201ENSMUST00000207662 180 ntBASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC5.53□□□□□ -1.52
Lsm1Q8VC85 CU062626.1-201ENSMUST00000225248 505 ntBASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Glt6d1-201ENSMUST00000038010 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Lsm1Q8VC85 4930550C14Rik-201ENSMUST00000005262 1237 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Krtdap-201ENSMUST00000098559 470 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Sult2a3-201ENSMUST00000098809 1018 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Gm43317-201ENSMUST00000197924 2544 ntBASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Gm37776-201ENSMUST00000193471 2497 ntBASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Gm16751-201ENSMUST00000142212 1685 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Lsm1Q8VC85 AC107645.1-201ENSMUST00000228660 1810 ntBASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Gm43389-201ENSMUST00000196080 2595 ntBASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Gm43523-201ENSMUST00000197397 2878 ntBASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Gm6125-201ENSMUST00000217983 3472 ntBASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Lsm1Q8VC85 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Lsm1Q8VC85 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Lsm1Q8VC85 Olfr202-203ENSMUST00000217485 1321 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Lsm1Q8VC85 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Lsm1Q8VC85 AC154573.1-201ENSMUST00000225913 4659 ntBASIC5.52□□□□□ -1.53
Lsm1Q8VC85 Gm42725-201ENSMUST00000199296 4193 ntBASIC5.52□□□□□ -1.53
Lsm1Q8VC85 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Lsm1Q8VC85 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Lsm1Q8VC85 Mir546-201ENSMUST00000102105 121 ntBASIC5.52□□□□□ -1.53
Lsm1Q8VC85 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC5.52□□□□□ -1.53
Lsm1Q8VC85 Gm12890-201ENSMUST00000120885 373 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms