Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm19921-201ENSMUST00000210505 703 ntBASIC7□□□□□ -1.29
Ccdc9Q8VC31 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC7□□□□□ -1.29
Ccdc9Q8VC31 AL929555.1-201ENSMUST00000215283 509 ntBASIC7□□□□□ -1.29
Ccdc9Q8VC31 Tbc1d7-204ENSMUST00000220787 892 ntTSL 1 (best) BASIC7□□□□□ -1.29
Ccdc9Q8VC31 CT030238.3-201ENSMUST00000227352 875 ntBASIC7□□□□□ -1.29
Ccdc9Q8VC31 AC102676.1-201ENSMUST00000228131 719 ntBASIC7□□□□□ -1.29
Ccdc9Q8VC31 Olfr303-201ENSMUST00000053958 1040 ntAPPRIS P1 BASIC7□□□□□ -1.29
Ccdc9Q8VC31 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC7□□□□□ -1.29
Ccdc9Q8VC31 Gm37814-201ENSMUST00000195820 3644 ntBASIC7□□□□□ -1.29
Ccdc9Q8VC31 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC7□□□□□ -1.29
Ccdc9Q8VC31 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC7□□□□□ -1.29
Ccdc9Q8VC31 Olfr266-203ENSMUST00000216610 1520 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Ccdc9Q8VC31 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Ccdc9Q8VC31 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Ccdc9Q8VC31 Olfr362-202ENSMUST00000213817 4059 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Ccdc9Q8VC31 Gm8177-201ENSMUST00000181591 1336 ntBASIC7□□□□□ -1.29
Ccdc9Q8VC31 Olfr1043-202ENSMUST00000213886 1675 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Ccdc9Q8VC31 Gm37018-201ENSMUST00000192441 3869 ntBASIC7□□□□□ -1.29
Ccdc9Q8VC31 Gm42540-201ENSMUST00000200319 2008 ntBASIC7□□□□□ -1.29
Ccdc9Q8VC31 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Ccdc9Q8VC31 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC6.99□□□□□ -1.29
Ccdc9Q8VC31 Gm20667-201ENSMUST00000175674 1930 ntBASIC6.99□□□□□ -1.29
Ccdc9Q8VC31 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Ccdc9Q8VC31 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC6.99□□□□□ -1.29
Ccdc9Q8VC31 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC6.99□□□□□ -1.29
Ccdc9Q8VC31 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC6.99□□□□□ -1.29
Ccdc9Q8VC31 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Ccdc9Q8VC31 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC6.99□□□□□ -1.29
Ccdc9Q8VC31 Mir674-201ENSMUST00000102421 100 ntBASIC6.99□□□□□ -1.29
Ccdc9Q8VC31 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
Ccdc9Q8VC31 Gm15171-201ENSMUST00000122191 334 ntBASIC6.99□□□□□ -1.29
Ccdc9Q8VC31 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC6.99□□□□□ -1.29
Ccdc9Q8VC31 Gm23855-201ENSMUST00000158377 135 ntBASIC6.99□□□□□ -1.29
Ccdc9Q8VC31 Tshb-203ENSMUST00000172026 604 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Ccdc9Q8VC31 Gm21839-201ENSMUST00000179536 378 ntBASIC6.99□□□□□ -1.29
Ccdc9Q8VC31 Mir6987-201ENSMUST00000184789 73 ntBASIC6.99□□□□□ -1.29
Ccdc9Q8VC31 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Ccdc9Q8VC31 Gm28620-201ENSMUST00000190463 439 ntBASIC6.99□□□□□ -1.29
Ccdc9Q8VC31 Gm38122-201ENSMUST00000192679 885 ntBASIC6.99□□□□□ -1.29
Ccdc9Q8VC31 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC6.99□□□□□ -1.29
Ccdc9Q8VC31 Gm34144-201ENSMUST00000197039 259 ntBASIC6.99□□□□□ -1.29
Ccdc9Q8VC31 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Ccdc9Q8VC31 Gm42666-201ENSMUST00000201954 152 ntBASIC6.99□□□□□ -1.29
Ccdc9Q8VC31 Gm43599-201ENSMUST00000202680 528 ntTSL 2 BASIC6.99□□□□□ -1.29
Ccdc9Q8VC31 Gm19764-201ENSMUST00000203630 649 ntBASIC6.99□□□□□ -1.29
Ccdc9Q8VC31 Gm44411-201ENSMUST00000204172 349 ntBASIC6.99□□□□□ -1.29
Ccdc9Q8VC31 Gm44548-201ENSMUST00000208929 192 ntBASIC6.99□□□□□ -1.29
Ccdc9Q8VC31 Gm45899-201ENSMUST00000212196 1276 ntBASIC6.99□□□□□ -1.29
Ccdc9Q8VC31 AC166358.4-201ENSMUST00000223030 105 ntBASIC6.99□□□□□ -1.29
Ccdc9Q8VC31 Gm34639-202ENSMUST00000223473 649 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Ccdc9Q8VC31 AC154252.1-201ENSMUST00000226041 473 ntBASIC6.99□□□□□ -1.29
Ccdc9Q8VC31 AC131178.1-201ENSMUST00000228649 492 ntBASIC6.99□□□□□ -1.29
Ccdc9Q8VC31 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Ccdc9Q8VC31 Mgst1-201ENSMUST00000008684 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Ccdc9Q8VC31 Vmn2r-ps42-201ENSMUST00000174123 2083 ntBASIC6.99□□□□□ -1.29
Ccdc9Q8VC31 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Ccdc9Q8VC31 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Ccdc9Q8VC31 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Ccdc9Q8VC31 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Ccdc9Q8VC31 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Ccdc9Q8VC31 Gm3278-201ENSMUST00000164459 1500 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Ccdc9Q8VC31 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC6.98□□□□□ -1.29
Ccdc9Q8VC31 Gm43648-201ENSMUST00000197775 2485 ntBASIC6.98□□□□□ -1.29
Ccdc9Q8VC31 Gm22256-201ENSMUST00000102291 107 ntBASIC6.98□□□□□ -1.29
Ccdc9Q8VC31 Gm25344-201ENSMUST00000104503 132 ntBASIC6.98□□□□□ -1.29
Ccdc9Q8VC31 Gm12303-201ENSMUST00000119506 673 ntBASIC6.98□□□□□ -1.29
Ccdc9Q8VC31 C230035I16Rik-201ENSMUST00000141543 623 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Ccdc9Q8VC31 Gm23762-201ENSMUST00000158348 106 ntBASIC6.98□□□□□ -1.29
Ccdc9Q8VC31 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Ccdc9Q8VC31 Gm27156-201ENSMUST00000184589 754 ntBASIC6.98□□□□□ -1.29
Ccdc9Q8VC31 Gm28846-201ENSMUST00000189161 368 ntBASIC6.98□□□□□ -1.29
Ccdc9Q8VC31 Gm5050-201ENSMUST00000197164 775 ntBASIC6.98□□□□□ -1.29
Ccdc9Q8VC31 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC6.98□□□□□ -1.29
Ccdc9Q8VC31 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Ccdc9Q8VC31 Gm6702-201ENSMUST00000208496 471 ntBASIC6.98□□□□□ -1.29
Ccdc9Q8VC31 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC6.98□□□□□ -1.29
Ccdc9Q8VC31 Gm19095-201ENSMUST00000220533 730 ntBASIC6.98□□□□□ -1.29
Ccdc9Q8VC31 AL837512.1-201ENSMUST00000223914 1073 ntBASIC6.98□□□□□ -1.29
Ccdc9Q8VC31 AC154323.2-201ENSMUST00000226557 1151 ntBASIC6.98□□□□□ -1.29
Ccdc9Q8VC31 AC123656.1-201ENSMUST00000227121 581 ntBASIC6.98□□□□□ -1.29
Ccdc9Q8VC31 AC154618.1-201ENSMUST00000227451 303 ntBASIC6.98□□□□□ -1.29
Ccdc9Q8VC31 Olfr309-201ENSMUST00000055690 927 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Ccdc9Q8VC31 Scimp-201ENSMUST00000074572 617 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Ccdc9Q8VC31 Olfr535-201ENSMUST00000074897 991 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Ccdc9Q8VC31 Gm44739-201ENSMUST00000205294 1426 ntBASIC6.98□□□□□ -1.29
Ccdc9Q8VC31 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Ccdc9Q8VC31 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC6.98□□□□□ -1.29
Ccdc9Q8VC31 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
Ccdc9Q8VC31 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Ccdc9Q8VC31 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC6.98□□□□□ -1.29
Ccdc9Q8VC31 Gm10568-201ENSMUST00000193244 1634 ntBASIC6.98□□□□□ -1.29
Ccdc9Q8VC31 Gm15581-201ENSMUST00000131334 5640 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Ccdc9Q8VC31 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Ccdc9Q8VC31 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC6.97□□□□□ -1.29
Ccdc9Q8VC31 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC6.97□□□□□ -1.29
Ccdc9Q8VC31 Gm24989-201ENSMUST00000104461 88 ntBASIC6.97□□□□□ -1.29
Ccdc9Q8VC31 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Ccdc9Q8VC31 Gm12468-201ENSMUST00000116189 404 ntBASIC6.97□□□□□ -1.29
Ccdc9Q8VC31 Gm14539-201ENSMUST00000117527 174 ntBASIC6.97□□□□□ -1.29
Ccdc9Q8VC31 Gm13739-201ENSMUST00000118020 530 ntBASIC6.97□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 103.2 ms