Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm16298-201ENSMUST00000161107 420 ntBASIC6.01□□□□□ -1.45
Clrn1Q8K445 Vmn1r57-201ENSMUST00000170780 933 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Clrn1Q8K445 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC6.01□□□□□ -1.45
Clrn1Q8K445 Rab26os-201ENSMUST00000176215 477 ntBASIC6.01□□□□□ -1.45
Clrn1Q8K445 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Clrn1Q8K445 Gm26509-201ENSMUST00000180947 948 ntBASIC6.01□□□□□ -1.45
Clrn1Q8K445 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Clrn1Q8K445 1700044C05Rik-201ENSMUST00000186060 898 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Clrn1Q8K445 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC6.01□□□□□ -1.45
Clrn1Q8K445 Ighv1-29-201ENSMUST00000194116 342 ntBASIC6.01□□□□□ -1.45
Clrn1Q8K445 Gm8861-201ENSMUST00000196346 832 ntBASIC6.01□□□□□ -1.45
Clrn1Q8K445 Gm43489-201ENSMUST00000196810 993 ntBASIC6.01□□□□□ -1.45
Clrn1Q8K445 Gm43345-201ENSMUST00000199484 269 ntBASIC6.01□□□□□ -1.45
Clrn1Q8K445 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC6.01□□□□□ -1.45
Clrn1Q8K445 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC6.01□□□□□ -1.45
Clrn1Q8K445 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
Clrn1Q8K445 Gm40797-201ENSMUST00000219762 385 ntTSL 2 BASIC6.01□□□□□ -1.45
Clrn1Q8K445 Gm9321-201ENSMUST00000221179 778 ntBASIC6.01□□□□□ -1.45
Clrn1Q8K445 AC158523.2-201ENSMUST00000222708 548 ntBASIC6.01□□□□□ -1.45
Clrn1Q8K445 AC167013.4-201ENSMUST00000226712 317 ntBASIC6.01□□□□□ -1.45
Clrn1Q8K445 1700102P08Rik-201ENSMUST00000035234 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Clrn1Q8K445 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
Clrn1Q8K445 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Clrn1Q8K445 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Clrn1Q8K445 Mir7b-201ENSMUST00000083557 111 ntBASIC6.01□□□□□ -1.45
Clrn1Q8K445 Mir465-201ENSMUST00000093563 74 ntBASIC6.01□□□□□ -1.45
Clrn1Q8K445 Gm8141-201ENSMUST00000190856 1723 ntBASIC6.01□□□□□ -1.45
Clrn1Q8K445 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Clrn1Q8K445 Olfr901-202ENSMUST00000216502 2639 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
Clrn1Q8K445 Gm14797-201ENSMUST00000119378 1480 ntBASIC6.01□□□□□ -1.45
Clrn1Q8K445 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Clrn1Q8K445 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Clrn1Q8K445 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
Clrn1Q8K445 Cnpy1-205ENSMUST00000141601 3018 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Clrn1Q8K445 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Clrn1Q8K445 Angptl1-201ENSMUST00000027885 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Clrn1Q8K445 Sytl2-203ENSMUST00000107211 3790 ntAPPRIS P4 TSL 1 (best) BASIC6.01□□□□□ -1.45
Clrn1Q8K445 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Clrn1Q8K445 Gm10447-201ENSMUST00000084653 2307 ntAPPRIS P1 BASIC6□□□□□ -1.45
Clrn1Q8K445 Pde10a-208ENSMUST00000115724 3612 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Clrn1Q8K445 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Clrn1Q8K445 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC6□□□□□ -1.45
Clrn1Q8K445 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC6□□□□□ -1.45
Clrn1Q8K445 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC6□□□□□ -1.45
Clrn1Q8K445 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC6□□□□□ -1.45
Clrn1Q8K445 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
Clrn1Q8K445 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Clrn1Q8K445 Olfr596-202ENSMUST00000214577 3392 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Clrn1Q8K445 Gm28431-201ENSMUST00000185592 2166 ntTSL 1 (best) BASIC6□□□□□ -1.45
Clrn1Q8K445 Gm28681-201ENSMUST00000187387 2166 ntTSL 1 (best) BASIC6□□□□□ -1.45
Clrn1Q8K445 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
Clrn1Q8K445 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Clrn1Q8K445 Gm17354-201ENSMUST00000170933 3039 ntTSL 5 BASIC6□□□□□ -1.45
Clrn1Q8K445 Olfr1311-203ENSMUST00000215321 2667 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Clrn1Q8K445 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC6□□□□□ -1.45
Clrn1Q8K445 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC6□□□□□ -1.45
Clrn1Q8K445 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC6□□□□□ -1.45
Clrn1Q8K445 Gm25773-201ENSMUST00000116718 127 ntBASIC6□□□□□ -1.45
Clrn1Q8K445 Gm14116-201ENSMUST00000117733 805 ntBASIC6□□□□□ -1.45
Clrn1Q8K445 Gm13156-201ENSMUST00000118348 321 ntBASIC6□□□□□ -1.45
Clrn1Q8K445 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC6□□□□□ -1.45
Clrn1Q8K445 Gm11976-201ENSMUST00000119236 295 ntBASIC6□□□□□ -1.45
Clrn1Q8K445 Gm4914-201ENSMUST00000119757 459 ntBASIC6□□□□□ -1.45
Clrn1Q8K445 Gm12101-201ENSMUST00000121590 390 ntBASIC6□□□□□ -1.45
Clrn1Q8K445 Gm11787-201ENSMUST00000121996 1050 ntBASIC6□□□□□ -1.45
Clrn1Q8K445 Gm23429-201ENSMUST00000122486 149 ntBASIC6□□□□□ -1.45
Clrn1Q8K445 1700025O08Rik-201ENSMUST00000123729 456 ntTSL 1 (best) BASIC6□□□□□ -1.45
Clrn1Q8K445 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC6□□□□□ -1.45
Clrn1Q8K445 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC6□□□□□ -1.45
Clrn1Q8K445 Gm12504-202ENSMUST00000148026 306 ntBASIC6□□□□□ -1.45
Clrn1Q8K445 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC6□□□□□ -1.45
Clrn1Q8K445 Gm24190-201ENSMUST00000157976 216 ntBASIC6□□□□□ -1.45
Clrn1Q8K445 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC6□□□□□ -1.45
Clrn1Q8K445 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
Clrn1Q8K445 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Clrn1Q8K445 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC6□□□□□ -1.45
Clrn1Q8K445 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC6□□□□□ -1.45
Clrn1Q8K445 Olfr1225-201ENSMUST00000188861 1027 ntAPPRIS P1 BASIC6□□□□□ -1.45
Clrn1Q8K445 Gm28763-201ENSMUST00000188870 166 ntTSL 5 BASIC6□□□□□ -1.45
Clrn1Q8K445 Gm29579-201ENSMUST00000190820 166 ntTSL 5 BASIC6□□□□□ -1.45
Clrn1Q8K445 Gm38030-201ENSMUST00000192376 475 ntBASIC6□□□□□ -1.45
Clrn1Q8K445 Gm38061-201ENSMUST00000192490 365 ntBASIC6□□□□□ -1.45
Clrn1Q8K445 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC6□□□□□ -1.45
Clrn1Q8K445 Ighv5-5-201ENSMUST00000193826 329 ntBASIC6□□□□□ -1.45
Clrn1Q8K445 Eif4e-202ENSMUST00000196990 856 ntTSL 3 BASIC6□□□□□ -1.45
Clrn1Q8K445 Gm18635-201ENSMUST00000199020 1060 ntBASIC6□□□□□ -1.45
Clrn1Q8K445 Gm43243-201ENSMUST00000199964 278 ntBASIC6□□□□□ -1.45
Clrn1Q8K445 Gm9245-201ENSMUST00000200528 983 ntBASIC6□□□□□ -1.45
Clrn1Q8K445 4930425K10Rik-201ENSMUST00000201190 745 ntTSL 1 (best) BASIC6□□□□□ -1.45
Clrn1Q8K445 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC6□□□□□ -1.45
Clrn1Q8K445 Gm17908-201ENSMUST00000205552 1256 ntBASIC6□□□□□ -1.45
Clrn1Q8K445 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC6□□□□□ -1.45
Clrn1Q8K445 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC6□□□□□ -1.45
Clrn1Q8K445 Tecr-214ENSMUST00000212990 648 ntTSL 1 (best) BASIC6□□□□□ -1.45
Clrn1Q8K445 AC192616.3-201ENSMUST00000220797 1124 ntBASIC6□□□□□ -1.45
Clrn1Q8K445 AC099934.5-201ENSMUST00000222699 945 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Clrn1Q8K445 AC154431.2-201ENSMUST00000225215 1055 ntBASIC6□□□□□ -1.45
Clrn1Q8K445 Glycam1-204ENSMUST00000228895 641 ntBASIC6□□□□□ -1.45
Clrn1Q8K445 Olfr424-201ENSMUST00000053941 948 ntAPPRIS P1 BASIC6□□□□□ -1.45
Clrn1Q8K445 Ube2d4-201ENSMUST00000075109 406 ntTSL 5 BASIC6□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms