Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC5.89□□□□□ -1.47
Ccdc28aQ8CEI3 Gm5087-204ENSMUST00000225820 645 ntBASIC5.89□□□□□ -1.47
Ccdc28aQ8CEI3 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ccdc28aQ8CEI3 4931400O07Rik-201ENSMUST00000033537 647 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ccdc28aQ8CEI3 Anxa10-202ENSMUST00000034054 1222 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Ccdc28aQ8CEI3 Vmn1r74-201ENSMUST00000050416 915 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Ccdc28aQ8CEI3 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Ccdc28aQ8CEI3 Olfr1306-202ENSMUST00000214844 1893 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Ccdc28aQ8CEI3 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ccdc28aQ8CEI3 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Ccdc28aQ8CEI3 Gm44739-201ENSMUST00000205294 1426 ntBASIC5.89□□□□□ -1.47
Ccdc28aQ8CEI3 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ccdc28aQ8CEI3 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Ccdc28aQ8CEI3 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ccdc28aQ8CEI3 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC5.88□□□□□ -1.47
Ccdc28aQ8CEI3 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC5.88□□□□□ -1.47
Ccdc28aQ8CEI3 Gm43682-201ENSMUST00000202150 2090 ntBASIC5.88□□□□□ -1.47
Ccdc28aQ8CEI3 Gm6427-201ENSMUST00000118721 979 ntBASIC5.88□□□□□ -1.47
Ccdc28aQ8CEI3 Gm8722-201ENSMUST00000121466 769 ntBASIC5.88□□□□□ -1.47
Ccdc28aQ8CEI3 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC5.88□□□□□ -1.47
Ccdc28aQ8CEI3 Gm5334-201ENSMUST00000187472 720 ntBASIC5.88□□□□□ -1.47
Ccdc28aQ8CEI3 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC5.88□□□□□ -1.47
Ccdc28aQ8CEI3 Zp4-ps-202ENSMUST00000222293 922 ntTSL 3 BASIC5.88□□□□□ -1.47
Ccdc28aQ8CEI3 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC5.88□□□□□ -1.47
Ccdc28aQ8CEI3 Gm36262-201ENSMUST00000223274 499 ntBASIC5.88□□□□□ -1.47
Ccdc28aQ8CEI3 AC164295.1-201ENSMUST00000224861 186 ntBASIC5.88□□□□□ -1.47
Ccdc28aQ8CEI3 CT010453.2-201ENSMUST00000227005 483 ntBASIC5.88□□□□□ -1.47
Ccdc28aQ8CEI3 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ccdc28aQ8CEI3 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Ccdc28aQ8CEI3 Gm4861-201ENSMUST00000068546 957 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ccdc28aQ8CEI3 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC5.88□□□□□ -1.47
Ccdc28aQ8CEI3 n-R5s161-201ENSMUST00000083728 114 ntBASIC5.88□□□□□ -1.47
Ccdc28aQ8CEI3 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC5.88□□□□□ -1.47
Ccdc28aQ8CEI3 Olfr191-202ENSMUST00000215647 3857 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
Ccdc28aQ8CEI3 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC5.88□□□□□ -1.47
Ccdc28aQ8CEI3 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC5.88□□□□□ -1.47
Ccdc28aQ8CEI3 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC5.88□□□□□ -1.47
Ccdc28aQ8CEI3 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
Ccdc28aQ8CEI3 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC5.88□□□□□ -1.47
Ccdc28aQ8CEI3 Gm38451-201ENSMUST00000208329 2646 ntBASIC5.88□□□□□ -1.47
Ccdc28aQ8CEI3 Gm38081-201ENSMUST00000192680 1645 ntBASIC5.88□□□□□ -1.47
Ccdc28aQ8CEI3 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Ccdc28aQ8CEI3 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ccdc28aQ8CEI3 Ankrd12-201ENSMUST00000038116 8991 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Ccdc28aQ8CEI3 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ccdc28aQ8CEI3 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC5.88□□□□□ -1.47
Ccdc28aQ8CEI3 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ccdc28aQ8CEI3 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Ccdc28aQ8CEI3 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Ccdc28aQ8CEI3 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC5.87□□□□□ -1.47
Ccdc28aQ8CEI3 Gm6818-201ENSMUST00000190556 2558 ntBASIC5.87□□□□□ -1.47
Ccdc28aQ8CEI3 CT009733.2-202ENSMUST00000224171 4748 ntBASIC5.87□□□□□ -1.47
Ccdc28aQ8CEI3 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Ccdc28aQ8CEI3 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ccdc28aQ8CEI3 Gm23839-201ENSMUST00000116957 109 ntBASIC5.87□□□□□ -1.47
Ccdc28aQ8CEI3 Ap3s1-ps1-201ENSMUST00000117113 579 ntBASIC5.87□□□□□ -1.47
Ccdc28aQ8CEI3 Gm7079-201ENSMUST00000119726 171 ntBASIC5.87□□□□□ -1.47
Ccdc28aQ8CEI3 Gm7309-201ENSMUST00000121670 581 ntBASIC5.87□□□□□ -1.47
Ccdc28aQ8CEI3 Mettl4-ps1-201ENSMUST00000127676 1272 ntBASIC5.87□□□□□ -1.47
Ccdc28aQ8CEI3 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Ccdc28aQ8CEI3 Gm22492-201ENSMUST00000157192 297 ntBASIC5.87□□□□□ -1.47
Ccdc28aQ8CEI3 Gm24692-201ENSMUST00000157761 146 ntBASIC5.87□□□□□ -1.47
Ccdc28aQ8CEI3 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Ccdc28aQ8CEI3 Ap3s1-ps2-201ENSMUST00000178107 579 ntBASIC5.87□□□□□ -1.47
Ccdc28aQ8CEI3 Gm21542-201ENSMUST00000182307 993 ntBASIC5.87□□□□□ -1.47
Ccdc28aQ8CEI3 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Ccdc28aQ8CEI3 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC5.87□□□□□ -1.47
Ccdc28aQ8CEI3 Gm37444-201ENSMUST00000193605 439 ntBASIC5.87□□□□□ -1.47
Ccdc28aQ8CEI3 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Ccdc28aQ8CEI3 Gm43946-201ENSMUST00000204058 886 ntBASIC5.87□□□□□ -1.47
Ccdc28aQ8CEI3 Gm19880-201ENSMUST00000207731 318 ntBASIC5.87□□□□□ -1.47
Ccdc28aQ8CEI3 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC5.87□□□□□ -1.47
Ccdc28aQ8CEI3 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Ccdc28aQ8CEI3 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC5.87□□□□□ -1.47
Ccdc28aQ8CEI3 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC5.87□□□□□ -1.47
Ccdc28aQ8CEI3 Gm5831-201ENSMUST00000216016 1209 ntBASIC5.87□□□□□ -1.47
Ccdc28aQ8CEI3 Spata9-201ENSMUST00000022081 1057 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ccdc28aQ8CEI3 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC5.87□□□□□ -1.47
Ccdc28aQ8CEI3 AC101205.1-201ENSMUST00000227916 907 ntBASIC5.87□□□□□ -1.47
Ccdc28aQ8CEI3 n-R5s69-201ENSMUST00000083872 119 ntBASIC5.87□□□□□ -1.47
Ccdc28aQ8CEI3 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Ccdc28aQ8CEI3 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC5.87□□□□□ -1.47
Ccdc28aQ8CEI3 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Ccdc28aQ8CEI3 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ccdc28aQ8CEI3 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Ccdc28aQ8CEI3 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Ccdc28aQ8CEI3 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
Ccdc28aQ8CEI3 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ccdc28aQ8CEI3 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Ccdc28aQ8CEI3 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ccdc28aQ8CEI3 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC5.87□□□□□ -1.47
Ccdc28aQ8CEI3 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
Ccdc28aQ8CEI3 AC153532.2-201ENSMUST00000219753 3844 ntBASIC5.87□□□□□ -1.47
Ccdc28aQ8CEI3 Olfr1443-201ENSMUST00000049724 4343 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ccdc28aQ8CEI3 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
Ccdc28aQ8CEI3 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Ccdc28aQ8CEI3 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ccdc28aQ8CEI3 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ccdc28aQ8CEI3 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ccdc28aQ8CEI3 AC151971.5-201ENSMUST00000214422 3254 ntBASIC5.86□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 91.7 ms