Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm18199-201ENSMUST00000173820 835 ntBASIC6.97□□□□□ -1.29
Vps53Q8CCB4 Obox2-204ENSMUST00000174305 834 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Vps53Q8CCB4 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC6.97□□□□□ -1.29
Vps53Q8CCB4 Gm7745-201ENSMUST00000182235 973 ntBASIC6.97□□□□□ -1.29
Vps53Q8CCB4 Gm8419-201ENSMUST00000189886 412 ntBASIC6.97□□□□□ -1.29
Vps53Q8CCB4 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC6.97□□□□□ -1.29
Vps53Q8CCB4 Gm38085-201ENSMUST00000195785 3062 ntBASIC6.97□□□□□ -1.29
Vps53Q8CCB4 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC6.97□□□□□ -1.29
Vps53Q8CCB4 Gm5306-201ENSMUST00000203325 757 ntBASIC6.97□□□□□ -1.29
Vps53Q8CCB4 4922502N22Rik-201ENSMUST00000204038 1149 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Vps53Q8CCB4 Gm43946-201ENSMUST00000204058 886 ntBASIC6.97□□□□□ -1.29
Vps53Q8CCB4 Gm5318-201ENSMUST00000205249 406 ntBASIC6.97□□□□□ -1.29
Vps53Q8CCB4 Gm17994-201ENSMUST00000209260 533 ntBASIC6.97□□□□□ -1.29
Vps53Q8CCB4 Gm6009-201ENSMUST00000210848 280 ntBASIC6.97□□□□□ -1.29
Vps53Q8CCB4 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC6.97□□□□□ -1.29
Vps53Q8CCB4 Gm7802-201ENSMUST00000216464 262 ntBASIC6.97□□□□□ -1.29
Vps53Q8CCB4 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Vps53Q8CCB4 AC142113.2-201ENSMUST00000217425 748 ntBASIC6.97□□□□□ -1.29
Vps53Q8CCB4 AC159297.1-201ENSMUST00000218689 290 ntBASIC6.97□□□□□ -1.29
Vps53Q8CCB4 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Vps53Q8CCB4 AC174797.2-203ENSMUST00000224017 716 ntBASIC6.97□□□□□ -1.29
Vps53Q8CCB4 AC163743.1-201ENSMUST00000224309 270 ntBASIC6.97□□□□□ -1.29
Vps53Q8CCB4 CU024892.1-201ENSMUST00000224869 515 ntBASIC6.97□□□□□ -1.29
Vps53Q8CCB4 AC174797.4-201ENSMUST00000225510 347 ntBASIC6.97□□□□□ -1.29
Vps53Q8CCB4 AC154527.3-201ENSMUST00000225519 989 ntBASIC6.97□□□□□ -1.29
Vps53Q8CCB4 AC154527.1-201ENSMUST00000225809 242 ntBASIC6.97□□□□□ -1.29
Vps53Q8CCB4 Zfp182-201ENSMUST00000040628 2487 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Vps53Q8CCB4 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Vps53Q8CCB4 Olfr1197-201ENSMUST00000099815 945 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Vps53Q8CCB4 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Vps53Q8CCB4 Serpinb5-203ENSMUST00000112730 2672 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Vps53Q8CCB4 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Vps53Q8CCB4 Gm15011-201ENSMUST00000117724 1480 ntBASIC6.97□□□□□ -1.29
Vps53Q8CCB4 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Vps53Q8CCB4 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC6.97□□□□□ -1.29
Vps53Q8CCB4 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Vps53Q8CCB4 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC6.96□□□□□ -1.29
Vps53Q8CCB4 Olfr1295-203ENSMUST00000217772 5539 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
Vps53Q8CCB4 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Vps53Q8CCB4 Gm44193-201ENSMUST00000204822 2523 ntBASIC6.96□□□□□ -1.29
Vps53Q8CCB4 Gm37056-201ENSMUST00000192141 1865 ntBASIC6.96□□□□□ -1.29
Vps53Q8CCB4 AC162936.1-201ENSMUST00000223676 2368 ntBASIC6.96□□□□□ -1.29
Vps53Q8CCB4 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Vps53Q8CCB4 Olfr293-202ENSMUST00000214401 2852 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
Vps53Q8CCB4 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Vps53Q8CCB4 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC6.96□□□□□ -1.29
Vps53Q8CCB4 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Vps53Q8CCB4 Olfr1377-202ENSMUST00000213291 2441 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Vps53Q8CCB4 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Vps53Q8CCB4 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Vps53Q8CCB4 Gm25295-201ENSMUST00000122794 306 ntBASIC6.96□□□□□ -1.3
Vps53Q8CCB4 Gm6081-201ENSMUST00000134472 489 ntBASIC6.96□□□□□ -1.3
Vps53Q8CCB4 Gm25459-201ENSMUST00000157953 114 ntBASIC6.96□□□□□ -1.3
Vps53Q8CCB4 Gm16269-201ENSMUST00000160532 409 ntBASIC6.96□□□□□ -1.3
Vps53Q8CCB4 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC6.96□□□□□ -1.3
Vps53Q8CCB4 Vmn1r176-201ENSMUST00000171073 915 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Vps53Q8CCB4 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC6.96□□□□□ -1.3
Vps53Q8CCB4 Gm27006-201ENSMUST00000182218 943 ntBASIC6.96□□□□□ -1.3
Vps53Q8CCB4 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC6.96□□□□□ -1.3
Vps53Q8CCB4 Olfr1252-201ENSMUST00000186710 1099 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Vps53Q8CCB4 Gm5066-201ENSMUST00000188479 822 ntBASIC6.96□□□□□ -1.3
Vps53Q8CCB4 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC6.96□□□□□ -1.3
Vps53Q8CCB4 Gm17937-201ENSMUST00000197908 742 ntBASIC6.96□□□□□ -1.3
Vps53Q8CCB4 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC6.96□□□□□ -1.3
Vps53Q8CCB4 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Vps53Q8CCB4 Gm45750-201ENSMUST00000211966 354 ntBASIC6.96□□□□□ -1.3
Vps53Q8CCB4 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC6.96□□□□□ -1.3
Vps53Q8CCB4 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC6.96□□□□□ -1.3
Vps53Q8CCB4 Gm9088-201ENSMUST00000220237 508 ntBASIC6.96□□□□□ -1.3
Vps53Q8CCB4 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC6.96□□□□□ -1.3
Vps53Q8CCB4 CT030645.3-201ENSMUST00000225483 1022 ntBASIC6.96□□□□□ -1.3
Vps53Q8CCB4 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Vps53Q8CCB4 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Vps53Q8CCB4 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Vps53Q8CCB4 Zfp994-201ENSMUST00000179996 4880 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Vps53Q8CCB4 AC121870.1-201ENSMUST00000216279 4879 ntBASIC6.96□□□□□ -1.3
Vps53Q8CCB4 AC156025.2-201ENSMUST00000225907 1533 ntBASIC6.96□□□□□ -1.3
Vps53Q8CCB4 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Vps53Q8CCB4 Olfr619-202ENSMUST00000215732 1370 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Vps53Q8CCB4 AC159308.1-201ENSMUST00000216615 1351 ntBASIC6.95□□□□□ -1.3
Vps53Q8CCB4 Olfr419-202ENSMUST00000214725 2685 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Vps53Q8CCB4 Olfr281-202ENSMUST00000217517 4535 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Vps53Q8CCB4 Scoc-201ENSMUST00000081506 1791 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Vps53Q8CCB4 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Vps53Q8CCB4 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Vps53Q8CCB4 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Vps53Q8CCB4 Gm43637-201ENSMUST00000202206 2926 ntBASIC6.95□□□□□ -1.3
Vps53Q8CCB4 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Vps53Q8CCB4 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Vps53Q8CCB4 Wnk1-218ENSMUST00000161512 1426 ntBASIC6.95□□□□□ -1.3
Vps53Q8CCB4 Gm9239-201ENSMUST00000186942 2557 ntBASIC6.95□□□□□ -1.3
Vps53Q8CCB4 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC6.95□□□□□ -1.3
Vps53Q8CCB4 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Vps53Q8CCB4 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Vps53Q8CCB4 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Vps53Q8CCB4 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Vps53Q8CCB4 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Vps53Q8CCB4 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC6.95□□□□□ -1.3
Vps53Q8CCB4 Gm15741-201ENSMUST00000119401 754 ntBASIC6.95□□□□□ -1.3
Vps53Q8CCB4 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC6.95□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 105.4 ms