Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 Gm9457-201ENSMUST00000180176 372 ntBASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 Mir6975-201ENSMUST00000184879 61 ntBASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 Gm28443-201ENSMUST00000189081 698 ntBASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 Gm29551-201ENSMUST00000190913 698 ntBASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 Gm18553-201ENSMUST00000194152 634 ntBASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 Rrh-205ENSMUST00000196902 1250 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 Gbp2-ps-201ENSMUST00000198870 1269 ntBASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 Gm7333-201ENSMUST00000213449 1060 ntBASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 Gm19169-201ENSMUST00000220109 1246 ntBASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 Prl7a2-201ENSMUST00000006660 1277 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 Gm23514-201ENSMUST00000082827 130 ntBASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 Mir31-201ENSMUST00000083474 106 ntBASIC5.16□□□□□ -1.58
Col6a6Q8C6K9 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Col6a6Q8C6K9 Slc8a1-203ENSMUST00000163680 2913 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.58
Col6a6Q8C6K9 Slc8a1-201ENSMUST00000086538 2913 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.58
Col6a6Q8C6K9 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC5.15□□□□□ -1.58
Col6a6Q8C6K9 Olfr1272-202ENSMUST00000117141 2442 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Col6a6Q8C6K9 Trhr-201ENSMUST00000038856 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Col6a6Q8C6K9 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Col6a6Q8C6K9 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
Col6a6Q8C6K9 Gm14388-201ENSMUST00000118119 477 ntBASIC5.15□□□□□ -1.58
Col6a6Q8C6K9 Gm14434-201ENSMUST00000120521 559 ntTSL 3 BASIC5.15□□□□□ -1.58
Col6a6Q8C6K9 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC5.15□□□□□ -1.58
Col6a6Q8C6K9 Gm7316-201ENSMUST00000165395 445 ntBASIC5.15□□□□□ -1.58
Col6a6Q8C6K9 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC5.15□□□□□ -1.58
Col6a6Q8C6K9 Gm27855-201ENSMUST00000184122 128 ntBASIC5.15□□□□□ -1.58
Col6a6Q8C6K9 AV026068-210ENSMUST00000189169 877 ntTSL 5 BASIC5.15□□□□□ -1.58
Col6a6Q8C6K9 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Col6a6Q8C6K9 Gm36328-201ENSMUST00000204237 432 ntTSL 3 BASIC5.15□□□□□ -1.58
Col6a6Q8C6K9 Gm2961-201ENSMUST00000211074 772 ntBASIC5.15□□□□□ -1.58
Col6a6Q8C6K9 AC123705.4-202ENSMUST00000221602 697 ntTSL 2 BASIC5.15□□□□□ -1.58
Col6a6Q8C6K9 AC131745.1-201ENSMUST00000223660 330 ntBASIC5.15□□□□□ -1.58
Col6a6Q8C6K9 AV026068-220ENSMUST00000224153 1147 ntBASIC5.15□□□□□ -1.58
Col6a6Q8C6K9 AC129085.4-201ENSMUST00000224536 570 ntBASIC5.15□□□□□ -1.58
Col6a6Q8C6K9 AV026068-224ENSMUST00000224827 928 ntBASIC5.15□□□□□ -1.58
Col6a6Q8C6K9 AC154436.2-201ENSMUST00000227408 208 ntBASIC5.15□□□□□ -1.58
Col6a6Q8C6K9 Mir17-201ENSMUST00000083574 84 ntBASIC5.15□□□□□ -1.58
Col6a6Q8C6K9 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Col6a6Q8C6K9 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Col6a6Q8C6K9 CT009480.3-201ENSMUST00000224051 3032 ntBASIC5.15□□□□□ -1.59
Col6a6Q8C6K9 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Col6a6Q8C6K9 Gm18313-201ENSMUST00000221036 1784 ntBASIC5.15□□□□□ -1.59
Col6a6Q8C6K9 Gm13881-201ENSMUST00000149025 3716 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Col6a6Q8C6K9 Evi5-201ENSMUST00000112642 5849 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Col6a6Q8C6K9 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.59
Col6a6Q8C6K9 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC5.15□□□□□ -1.59
Col6a6Q8C6K9 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
Col6a6Q8C6K9 Olfr744-202ENSMUST00000213668 2583 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Col6a6Q8C6K9 Kmo-201ENSMUST00000040250 2695 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
Col6a6Q8C6K9 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Col6a6Q8C6K9 Gm11290-204ENSMUST00000224688 3042 ntBASIC5.15□□□□□ -1.59
Col6a6Q8C6K9 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
Col6a6Q8C6K9 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.59
Col6a6Q8C6K9 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC5.15□□□□□ -1.59
Col6a6Q8C6K9 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Col6a6Q8C6K9 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Col6a6Q8C6K9 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a6Q8C6K9 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a6Q8C6K9 Gm23750-201ENSMUST00000104222 132 ntBASIC5.14□□□□□ -1.59
Col6a6Q8C6K9 Gm7079-201ENSMUST00000119726 171 ntBASIC5.14□□□□□ -1.59
Col6a6Q8C6K9 Gm12293-201ENSMUST00000121898 590 ntBASIC5.14□□□□□ -1.59
Col6a6Q8C6K9 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC5.14□□□□□ -1.59
Col6a6Q8C6K9 Gm25655-201ENSMUST00000158465 290 ntBASIC5.14□□□□□ -1.59
Col6a6Q8C6K9 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a6Q8C6K9 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a6Q8C6K9 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a6Q8C6K9 Crtam-204ENSMUST00000188848 5001 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a6Q8C6K9 Gm37932-201ENSMUST00000192258 1167 ntBASIC5.14□□□□□ -1.59
Col6a6Q8C6K9 Gm42452-201ENSMUST00000199749 617 ntBASIC5.14□□□□□ -1.59
Col6a6Q8C6K9 Ctla2b-201ENSMUST00000021884 842 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a6Q8C6K9 Gm5436-201ENSMUST00000058103 643 ntBASIC5.14□□□□□ -1.59
Col6a6Q8C6K9 4930516K23Rik-201ENSMUST00000074064 6133 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Col6a6Q8C6K9 Gm24706-201ENSMUST00000082806 137 ntBASIC5.14□□□□□ -1.59
Col6a6Q8C6K9 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a6Q8C6K9 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a6Q8C6K9 Psma2-201ENSMUST00000170836 2911 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a6Q8C6K9 Olfr1555-ps1-202ENSMUST00000219261 2918 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Col6a6Q8C6K9 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC5.14□□□□□ -1.59
Col6a6Q8C6K9 Gm20075-201ENSMUST00000220449 2161 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Col6a6Q8C6K9 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a6Q8C6K9 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Col6a6Q8C6K9 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a6Q8C6K9 Gm12641-201ENSMUST00000117874 985 ntBASIC5.14□□□□□ -1.59
Col6a6Q8C6K9 Gm11759-201ENSMUST00000121742 464 ntBASIC5.14□□□□□ -1.59
Col6a6Q8C6K9 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a6Q8C6K9 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a6Q8C6K9 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a6Q8C6K9 Gm28683-201ENSMUST00000187134 615 ntBASIC5.14□□□□□ -1.59
Col6a6Q8C6K9 Gm28840-205ENSMUST00000189320 615 ntBASIC5.14□□□□□ -1.59
Col6a6Q8C6K9 Gm28835-203ENSMUST00000190062 615 ntBASIC5.14□□□□□ -1.59
Col6a6Q8C6K9 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Col6a6Q8C6K9 Olfr1206-201ENSMUST00000077302 924 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Col6a6Q8C6K9 AC116726.1-201ENSMUST00000215028 3497 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms