Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm26170-201ENSMUST00000158419 148 ntBASIC5.84□□□□□ -1.47
Trub1Q8C0D0 Gm23872-201ENSMUST00000175432 77 ntBASIC5.84□□□□□ -1.47
Trub1Q8C0D0 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Trub1Q8C0D0 Gm2539-203ENSMUST00000181352 746 ntBASIC5.84□□□□□ -1.47
Trub1Q8C0D0 Gm27653-201ENSMUST00000185037 136 ntBASIC5.84□□□□□ -1.47
Trub1Q8C0D0 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC5.84□□□□□ -1.47
Trub1Q8C0D0 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC5.84□□□□□ -1.47
Trub1Q8C0D0 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC5.84□□□□□ -1.47
Trub1Q8C0D0 Gm5110-201ENSMUST00000203122 1063 ntBASIC5.84□□□□□ -1.47
Trub1Q8C0D0 Gm45870-201ENSMUST00000211269 601 ntBASIC5.84□□□□□ -1.47
Trub1Q8C0D0 Gm33242-201ENSMUST00000212130 1057 ntBASIC5.84□□□□□ -1.47
Trub1Q8C0D0 Gm19186-201ENSMUST00000219922 333 ntBASIC5.84□□□□□ -1.47
Trub1Q8C0D0 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC5.84□□□□□ -1.47
Trub1Q8C0D0 Spata9-201ENSMUST00000022081 1057 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Trub1Q8C0D0 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC5.84□□□□□ -1.47
Trub1Q8C0D0 AC102139.1-201ENSMUST00000227000 251 ntBASIC5.84□□□□□ -1.47
Trub1Q8C0D0 AC156016.5-201ENSMUST00000228742 355 ntBASIC5.84□□□□□ -1.47
Trub1Q8C0D0 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Trub1Q8C0D0 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Trub1Q8C0D0 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Trub1Q8C0D0 Gm22126-201ENSMUST00000083244 142 ntBASIC5.84□□□□□ -1.47
Trub1Q8C0D0 Mir143-201ENSMUST00000083511 63 ntBASIC5.84□□□□□ -1.47
Trub1Q8C0D0 Mir375-201ENSMUST00000083682 64 ntBASIC5.84□□□□□ -1.47
Trub1Q8C0D0 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Trub1Q8C0D0 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Trub1Q8C0D0 Gm33336-201ENSMUST00000219656 1676 ntTSL 5 BASIC5.84□□□□□ -1.47
Trub1Q8C0D0 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Trub1Q8C0D0 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Trub1Q8C0D0 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Trub1Q8C0D0 Gm4954-201ENSMUST00000135069 1601 ntBASIC5.84□□□□□ -1.47
Trub1Q8C0D0 B830042I05Rik-201ENSMUST00000208333 1620 ntTSL 5 BASIC5.84□□□□□ -1.47
Trub1Q8C0D0 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Trub1Q8C0D0 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Trub1Q8C0D0 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Trub1Q8C0D0 Anapc10-201ENSMUST00000048147 2801 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Trub1Q8C0D0 AC124516.3-201ENSMUST00000221302 3613 ntBASIC5.84□□□□□ -1.48
Trub1Q8C0D0 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Trub1Q8C0D0 Gm42510-201ENSMUST00000196470 2258 ntBASIC5.83□□□□□ -1.48
Trub1Q8C0D0 AC122357.3-201ENSMUST00000221260 2293 ntBASIC5.83□□□□□ -1.48
Trub1Q8C0D0 AC107645.1-201ENSMUST00000228660 1810 ntBASIC5.83□□□□□ -1.48
Trub1Q8C0D0 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Trub1Q8C0D0 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Trub1Q8C0D0 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC5.83□□□□□ -1.48
Trub1Q8C0D0 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Trub1Q8C0D0 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Trub1Q8C0D0 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Trub1Q8C0D0 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Trub1Q8C0D0 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Trub1Q8C0D0 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC5.83□□□□□ -1.48
Trub1Q8C0D0 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Trub1Q8C0D0 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC5.83□□□□□ -1.48
Trub1Q8C0D0 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Trub1Q8C0D0 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Trub1Q8C0D0 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Trub1Q8C0D0 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC5.83□□□□□ -1.48
Trub1Q8C0D0 Gm14106-201ENSMUST00000119382 438 ntBASIC5.83□□□□□ -1.48
Trub1Q8C0D0 Gm22959-201ENSMUST00000122514 303 ntBASIC5.83□□□□□ -1.48
Trub1Q8C0D0 Gm23233-201ENSMUST00000157301 137 ntBASIC5.83□□□□□ -1.48
Trub1Q8C0D0 Gm15995-201ENSMUST00000159897 574 ntTSL 5 BASIC5.83□□□□□ -1.48
Trub1Q8C0D0 Vmn1r91-201ENSMUST00000165330 924 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Trub1Q8C0D0 Mir7046-201ENSMUST00000183435 66 ntBASIC5.83□□□□□ -1.48
Trub1Q8C0D0 Gm18865-201ENSMUST00000193011 1171 ntBASIC5.83□□□□□ -1.48
Trub1Q8C0D0 Gm412-201ENSMUST00000193360 948 ntBASIC5.83□□□□□ -1.48
Trub1Q8C0D0 AC154851.1-201ENSMUST00000221591 655 ntBASIC5.83□□□□□ -1.48
Trub1Q8C0D0 AC160105.1-201ENSMUST00000221931 682 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Trub1Q8C0D0 AC160114.2-201ENSMUST00000223021 300 ntBASIC5.83□□□□□ -1.48
Trub1Q8C0D0 Vmn1r70-201ENSMUST00000055847 897 ntAPPRIS P2 BASIC5.83□□□□□ -1.48
Trub1Q8C0D0 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Trub1Q8C0D0 Fpr-rs4-201ENSMUST00000095651 972 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Trub1Q8C0D0 Olfr1254-201ENSMUST00000099764 945 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Trub1Q8C0D0 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Trub1Q8C0D0 Gm37221-201ENSMUST00000194472 3007 ntBASIC5.83□□□□□ -1.48
Trub1Q8C0D0 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Trub1Q8C0D0 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Trub1Q8C0D0 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC5.83□□□□□ -1.48
Trub1Q8C0D0 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Trub1Q8C0D0 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Trub1Q8C0D0 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Trub1Q8C0D0 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC5.83□□□□□ -1.48
Trub1Q8C0D0 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Trub1Q8C0D0 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Trub1Q8C0D0 Gm7919-201ENSMUST00000202043 1389 ntBASIC5.82□□□□□ -1.48
Trub1Q8C0D0 Gm37959-201ENSMUST00000191700 2897 ntBASIC5.82□□□□□ -1.48
Trub1Q8C0D0 Gm3608-201ENSMUST00000086725 2858 ntBASIC5.82□□□□□ -1.48
Trub1Q8C0D0 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC5.82□□□□□ -1.48
Trub1Q8C0D0 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Trub1Q8C0D0 Gm24886-201ENSMUST00000104384 123 ntBASIC5.82□□□□□ -1.48
Trub1Q8C0D0 Gm8545-201ENSMUST00000120692 801 ntBASIC5.82□□□□□ -1.48
Trub1Q8C0D0 Gm25291-201ENSMUST00000122795 144 ntBASIC5.82□□□□□ -1.48
Trub1Q8C0D0 Spata3-203ENSMUST00000125083 704 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Trub1Q8C0D0 Gm23280-201ENSMUST00000157905 139 ntBASIC5.82□□□□□ -1.48
Trub1Q8C0D0 Gm22724-201ENSMUST00000158091 127 ntBASIC5.82□□□□□ -1.48
Trub1Q8C0D0 Scarna10-201ENSMUST00000158992 325 ntBASIC5.82□□□□□ -1.48
Trub1Q8C0D0 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC5.82□□□□□ -1.48
Trub1Q8C0D0 Gm37581-201ENSMUST00000192371 988 ntBASIC5.82□□□□□ -1.48
Trub1Q8C0D0 Gm19880-201ENSMUST00000207731 318 ntBASIC5.82□□□□□ -1.48
Trub1Q8C0D0 Gm46223-201ENSMUST00000215196 675 ntBASIC5.82□□□□□ -1.48
Trub1Q8C0D0 Cd84-201ENSMUST00000042302 1019 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
Trub1Q8C0D0 Olfr1217-201ENSMUST00000099799 1105 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Trub1Q8C0D0 Gm44901-201ENSMUST00000208157 3977 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms