Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm29454-201ENSMUST00000190805 393 ntBASIC6.92□□□□□ -1.3
Ddx55Q6ZPL9 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ddx55Q6ZPL9 Gm37024-201ENSMUST00000192224 868 ntBASIC6.92□□□□□ -1.3
Ddx55Q6ZPL9 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Ddx55Q6ZPL9 Gm38015-201ENSMUST00000193048 188 ntBASIC6.92□□□□□ -1.3
Ddx55Q6ZPL9 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC6.92□□□□□ -1.3
Ddx55Q6ZPL9 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC6.92□□□□□ -1.3
Ddx55Q6ZPL9 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC6.92□□□□□ -1.3
Ddx55Q6ZPL9 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ddx55Q6ZPL9 Ighv8-1-201ENSMUST00000194897 291 ntBASIC6.92□□□□□ -1.3
Ddx55Q6ZPL9 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC6.92□□□□□ -1.3
Ddx55Q6ZPL9 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC6.92□□□□□ -1.3
Ddx55Q6ZPL9 Gm43895-201ENSMUST00000203219 855 ntBASIC6.92□□□□□ -1.3
Ddx55Q6ZPL9 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ddx55Q6ZPL9 AC119892.1-201ENSMUST00000217997 384 ntTSL 3 BASIC6.92□□□□□ -1.3
Ddx55Q6ZPL9 AC192088.2-201ENSMUST00000227590 411 ntBASIC6.92□□□□□ -1.3
Ddx55Q6ZPL9 AC134335.1-201ENSMUST00000227626 329 ntBASIC6.92□□□□□ -1.3
Ddx55Q6ZPL9 AC123665.6-201ENSMUST00000228568 538 ntBASIC6.92□□□□□ -1.3
Ddx55Q6ZPL9 Vmn1r67-201ENSMUST00000055964 999 ntAPPRIS P2 BASIC6.92□□□□□ -1.3
Ddx55Q6ZPL9 n-R5s161-201ENSMUST00000083728 114 ntBASIC6.92□□□□□ -1.3
Ddx55Q6ZPL9 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ddx55Q6ZPL9 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ddx55Q6ZPL9 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC6.92□□□□□ -1.3
Ddx55Q6ZPL9 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Ddx55Q6ZPL9 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ddx55Q6ZPL9 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ddx55Q6ZPL9 Olfr472-203ENSMUST00000216937 5392 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
Ddx55Q6ZPL9 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ddx55Q6ZPL9 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Ddx55Q6ZPL9 Il5ra-203ENSMUST00000205004 2271 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ddx55Q6ZPL9 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ddx55Q6ZPL9 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ddx55Q6ZPL9 Mageb18-201ENSMUST00000088137 1571 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Ddx55Q6ZPL9 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ddx55Q6ZPL9 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Ddx55Q6ZPL9 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
Ddx55Q6ZPL9 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ddx55Q6ZPL9 9930038B18Rik-201ENSMUST00000151816 3966 ntTSL 5 BASIC6.91□□□□□ -1.3
Ddx55Q6ZPL9 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ddx55Q6ZPL9 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Ddx55Q6ZPL9 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Ddx55Q6ZPL9 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
Ddx55Q6ZPL9 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
Ddx55Q6ZPL9 Cyp2j6-201ENSMUST00000030303 3605 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ddx55Q6ZPL9 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ddx55Q6ZPL9 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Ddx55Q6ZPL9 Mir1192-201ENSMUST00000116976 121 ntBASIC6.91□□□□□ -1.3
Ddx55Q6ZPL9 4930583P06Rik-201ENSMUST00000136658 706 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Ddx55Q6ZPL9 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Ddx55Q6ZPL9 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC6.91□□□□□ -1.3
Ddx55Q6ZPL9 Mir3080-201ENSMUST00000175010 79 ntBASIC6.91□□□□□ -1.3
Ddx55Q6ZPL9 Gm8321-201ENSMUST00000181691 980 ntBASIC6.91□□□□□ -1.3
Ddx55Q6ZPL9 Gm27225-201ENSMUST00000183833 557 ntBASIC6.91□□□□□ -1.3
Ddx55Q6ZPL9 Vis1-201ENSMUST00000183957 201 ntBASIC6.91□□□□□ -1.3
Ddx55Q6ZPL9 AV026068-209ENSMUST00000189143 517 ntTSL 3 BASIC6.91□□□□□ -1.3
Ddx55Q6ZPL9 Gm28973-201ENSMUST00000189310 613 ntBASIC6.91□□□□□ -1.3
Ddx55Q6ZPL9 Gm21742-201ENSMUST00000189352 548 ntBASIC6.91□□□□□ -1.3
Ddx55Q6ZPL9 Gm20776-201ENSMUST00000189940 700 ntBASIC6.91□□□□□ -1.3
Ddx55Q6ZPL9 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC6.91□□□□□ -1.3
Ddx55Q6ZPL9 Gm29288-201ENSMUST00000191582 901 ntBASIC6.91□□□□□ -1.3
Ddx55Q6ZPL9 Gm37152-201ENSMUST00000193369 1175 ntBASIC6.91□□□□□ -1.3
Ddx55Q6ZPL9 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Ddx55Q6ZPL9 Gm38670-201ENSMUST00000199248 77 ntBASIC6.91□□□□□ -1.3
Ddx55Q6ZPL9 Gm42814-201ENSMUST00000199370 460 ntBASIC6.91□□□□□ -1.3
Ddx55Q6ZPL9 Gm8039-201ENSMUST00000204758 712 ntBASIC6.91□□□□□ -1.3
Ddx55Q6ZPL9 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC6.91□□□□□ -1.3
Ddx55Q6ZPL9 AC124356.2-201ENSMUST00000221874 336 ntBASIC6.91□□□□□ -1.3
Ddx55Q6ZPL9 AC117797.1-201ENSMUST00000223977 695 ntBASIC6.91□□□□□ -1.3
Ddx55Q6ZPL9 AC118006.2-201ENSMUST00000224167 962 ntBASIC6.91□□□□□ -1.3
Ddx55Q6ZPL9 Tas2r108-201ENSMUST00000038750 1013 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Ddx55Q6ZPL9 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ddx55Q6ZPL9 Uts2b-201ENSMUST00000070531 835 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ddx55Q6ZPL9 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Ddx55Q6ZPL9 n-R5s173-201ENSMUST00000082620 119 ntBASIC6.91□□□□□ -1.3
Ddx55Q6ZPL9 Gm26203-201ENSMUST00000082911 114 ntBASIC6.91□□□□□ -1.3
Ddx55Q6ZPL9 Mir188-201ENSMUST00000083464 68 ntBASIC6.91□□□□□ -1.3
Ddx55Q6ZPL9 n-R5s46-201ENSMUST00000083960 116 ntBASIC6.91□□□□□ -1.3
Ddx55Q6ZPL9 AC164107.1-202ENSMUST00000228953 1816 ntBASIC6.91□□□□□ -1.3
Ddx55Q6ZPL9 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Ddx55Q6ZPL9 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC6.91□□□□□ -1.3
Ddx55Q6ZPL9 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC6.91□□□□□ -1.3
Ddx55Q6ZPL9 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ddx55Q6ZPL9 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ddx55Q6ZPL9 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ddx55Q6ZPL9 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ddx55Q6ZPL9 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ddx55Q6ZPL9 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Ddx55Q6ZPL9 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ddx55Q6ZPL9 Gm37254-201ENSMUST00000193542 3901 ntBASIC6.91□□□□□ -1.3
Ddx55Q6ZPL9 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Ddx55Q6ZPL9 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Ddx55Q6ZPL9 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC6.9□□□□□ -1.3
Ddx55Q6ZPL9 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Ddx55Q6ZPL9 Olfr1360-203ENSMUST00000216083 2315 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Ddx55Q6ZPL9 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Ddx55Q6ZPL9 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Ddx55Q6ZPL9 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
Ddx55Q6ZPL9 Gm42455-201ENSMUST00000199761 2736 ntBASIC6.9□□□□□ -1.3
Ddx55Q6ZPL9 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Ddx55Q6ZPL9 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms