Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm28840-205ENSMUST00000189320 615 ntBASIC6.67□□□□□ -1.34
Nup98Q6PFD9 Gm28835-203ENSMUST00000190062 615 ntBASIC6.67□□□□□ -1.34
Nup98Q6PFD9 Gm35648-201ENSMUST00000202304 475 ntBASIC6.67□□□□□ -1.34
Nup98Q6PFD9 Rfpl4-203ENSMUST00000208468 1238 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
Nup98Q6PFD9 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Nup98Q6PFD9 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC6.67□□□□□ -1.34
Nup98Q6PFD9 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Nup98Q6PFD9 Adcy10-203ENSMUST00000111440 5078 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Nup98Q6PFD9 Slc7a11-201ENSMUST00000029297 9223 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Nup98Q6PFD9 Hspg2-201ENSMUST00000030547 14187 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Nup98Q6PFD9 Golga3-201ENSMUST00000031477 4805 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Nup98Q6PFD9 Cep97-201ENSMUST00000023270 7911 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Nup98Q6PFD9 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Nup98Q6PFD9 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC6.67□□□□□ -1.34
Nup98Q6PFD9 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Nup98Q6PFD9 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Nup98Q6PFD9 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
Nup98Q6PFD9 Gm13762-202ENSMUST00000168169 2180 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
Nup98Q6PFD9 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Nup98Q6PFD9 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Nup98Q6PFD9 Gm37914-201ENSMUST00000195317 2679 ntBASIC6.67□□□□□ -1.34
Nup98Q6PFD9 Ryr2-202ENSMUST00000170156 16813 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Nup98Q6PFD9 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Nup98Q6PFD9 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Nup98Q6PFD9 Mir6343-201ENSMUST00000183584 84 ntBASIC6.66□□□□□ -1.34
Nup98Q6PFD9 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC6.66□□□□□ -1.34
Nup98Q6PFD9 Gm7496-201ENSMUST00000192573 1034 ntBASIC6.66□□□□□ -1.34
Nup98Q6PFD9 Gm43361-201ENSMUST00000196562 4690 ntBASIC6.66□□□□□ -1.34
Nup98Q6PFD9 Gm42437-201ENSMUST00000197263 923 ntBASIC6.66□□□□□ -1.34
Nup98Q6PFD9 AC153548.2-201ENSMUST00000219770 885 ntBASIC6.66□□□□□ -1.34
Nup98Q6PFD9 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC6.66□□□□□ -1.34
Nup98Q6PFD9 CT010486.1-201ENSMUST00000224609 422 ntBASIC6.66□□□□□ -1.34
Nup98Q6PFD9 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Nup98Q6PFD9 Olfr1406-201ENSMUST00000072395 1063 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Nup98Q6PFD9 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Nup98Q6PFD9 Mir134-201ENSMUST00000083492 71 ntBASIC6.66□□□□□ -1.34
Nup98Q6PFD9 Olfr568-201ENSMUST00000098216 942 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Nup98Q6PFD9 Gm21051-201ENSMUST00000221757 1688 ntBASIC6.66□□□□□ -1.34
Nup98Q6PFD9 Gm6602-201ENSMUST00000198910 1927 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Nup98Q6PFD9 Pcdh19-203ENSMUST00000167944 8407 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
Nup98Q6PFD9 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Nup98Q6PFD9 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
Nup98Q6PFD9 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC6.66□□□□□ -1.34
Nup98Q6PFD9 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Nup98Q6PFD9 Gm14367-201ENSMUST00000119214 1497 ntBASIC6.66□□□□□ -1.34
Nup98Q6PFD9 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Nup98Q6PFD9 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Nup98Q6PFD9 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Nup98Q6PFD9 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Nup98Q6PFD9 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Nup98Q6PFD9 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Nup98Q6PFD9 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Nup98Q6PFD9 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Nup98Q6PFD9 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC6.66□□□□□ -1.34
Nup98Q6PFD9 Itpr2-201ENSMUST00000053273 8331 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Nup98Q6PFD9 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Nup98Q6PFD9 Olfr1278-206ENSMUST00000216229 6819 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Nup98Q6PFD9 Gm44235-201ENSMUST00000204312 3058 ntBASIC6.66□□□□□ -1.34
Nup98Q6PFD9 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
Nup98Q6PFD9 Gm42874-201ENSMUST00000198888 1774 ntBASIC6.66□□□□□ -1.34
Nup98Q6PFD9 Gm13346-201ENSMUST00000135767 3634 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Nup98Q6PFD9 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC6.66□□□□□ -1.34
Nup98Q6PFD9 Gm15490-201ENSMUST00000119894 387 ntBASIC6.66□□□□□ -1.34
Nup98Q6PFD9 Gm13991-201ENSMUST00000120190 648 ntBASIC6.66□□□□□ -1.34
Nup98Q6PFD9 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC6.66□□□□□ -1.34
Nup98Q6PFD9 Gm4845-201ENSMUST00000179202 562 ntBASIC6.66□□□□□ -1.34
Nup98Q6PFD9 Igkv4-56-201ENSMUST00000198436 349 ntBASIC6.66□□□□□ -1.34
Nup98Q6PFD9 Igkv12-66-201ENSMUST00000199305 348 ntBASIC6.66□□□□□ -1.34
Nup98Q6PFD9 Gm44580-201ENSMUST00000206333 877 ntBASIC6.66□□□□□ -1.34
Nup98Q6PFD9 AC153961.2-201ENSMUST00000218877 164 ntBASIC6.66□□□□□ -1.34
Nup98Q6PFD9 AC155808.1-201ENSMUST00000219288 409 ntBASIC6.66□□□□□ -1.34
Nup98Q6PFD9 AC156950.1-201ENSMUST00000219604 456 ntBASIC6.66□□□□□ -1.34
Nup98Q6PFD9 Zfp429-203ENSMUST00000224684 524 ntBASIC6.66□□□□□ -1.34
Nup98Q6PFD9 AC131745.2-201ENSMUST00000225736 565 ntBASIC6.66□□□□□ -1.34
Nup98Q6PFD9 Mir133b-201ENSMUST00000083546 119 ntBASIC6.66□□□□□ -1.34
Nup98Q6PFD9 Olfr295-202ENSMUST00000215365 6013 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
Nup98Q6PFD9 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Nup98Q6PFD9 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC6.66□□□□□ -1.34
Nup98Q6PFD9 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Nup98Q6PFD9 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Nup98Q6PFD9 Mdc1-201ENSMUST00000082337 7335 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Nup98Q6PFD9 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Nup98Q6PFD9 Gm37077-201ENSMUST00000195723 3691 ntBASIC6.65□□□□□ -1.34
Nup98Q6PFD9 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Nup98Q6PFD9 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC6.65□□□□□ -1.34
Nup98Q6PFD9 4933403O08Rik-202ENSMUST00000152343 1520 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Nup98Q6PFD9 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Nup98Q6PFD9 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
Nup98Q6PFD9 Fryl-202ENSMUST00000101127 11340 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Nup98Q6PFD9 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Nup98Q6PFD9 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC6.65□□□□□ -1.34
Nup98Q6PFD9 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC6.65□□□□□ -1.34
Nup98Q6PFD9 Dbi-202ENSMUST00000112648 504 ntTSL 2 BASIC6.65□□□□□ -1.34
Nup98Q6PFD9 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
Nup98Q6PFD9 Gm12850-201ENSMUST00000119210 436 ntBASIC6.65□□□□□ -1.34
Nup98Q6PFD9 Gm25176-201ENSMUST00000122640 125 ntBASIC6.65□□□□□ -1.34
Nup98Q6PFD9 Gm23883-201ENSMUST00000122686 290 ntBASIC6.65□□□□□ -1.34
Nup98Q6PFD9 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Nup98Q6PFD9 Crem-224ENSMUST00000147138 436 ntTSL 5 BASIC6.65□□□□□ -1.34
Nup98Q6PFD9 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms