Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Shank3Q4ACU6 6330403N20Rik-201ENSMUST00000180467 1189 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Shank3Q4ACU6 Gm27754-201ENSMUST00000183340 126 ntBASIC7.11□□□□□ -1.27
Shank3Q4ACU6 Gm38040-201ENSMUST00000193505 225 ntBASIC7.11□□□□□ -1.27
Shank3Q4ACU6 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC7.11□□□□□ -1.27
Shank3Q4ACU6 Gm7688-201ENSMUST00000212857 337 ntBASIC7.11□□□□□ -1.27
Shank3Q4ACU6 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC7.11□□□□□ -1.27
Shank3Q4ACU6 Enkur-201ENSMUST00000027992 1199 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Shank3Q4ACU6 Gm4822-201ENSMUST00000077551 479 ntBASIC7.11□□□□□ -1.27
Shank3Q4ACU6 Gm24706-201ENSMUST00000082806 137 ntBASIC7.11□□□□□ -1.27
Shank3Q4ACU6 Gm22741-201ENSMUST00000083438 165 ntBASIC7.11□□□□□ -1.27
Shank3Q4ACU6 Pde4b-204ENSMUST00000106901 2129 ntTSL 2 BASIC7.11□□□□□ -1.27
Shank3Q4ACU6 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC7.11□□□□□ -1.27
Shank3Q4ACU6 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC7.11□□□□□ -1.27
Shank3Q4ACU6 Enox2-209ENSMUST00000167659 3632 ntTSL 5 BASIC7.11□□□□□ -1.27
Shank3Q4ACU6 Olfr25-202ENSMUST00000212354 1362 ntAPPRIS ALT2 BASIC7.11□□□□□ -1.27
Shank3Q4ACU6 Nvl-201ENSMUST00000027797 9392 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Shank3Q4ACU6 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Shank3Q4ACU6 Col25a1-202ENSMUST00000106353 6701 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
Shank3Q4ACU6 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Shank3Q4ACU6 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Shank3Q4ACU6 Gm24469-201ENSMUST00000104487 131 ntBASIC7.1□□□□□ -1.27
Shank3Q4ACU6 Gm3242-201ENSMUST00000171273 485 ntBASIC7.1□□□□□ -1.27
Shank3Q4ACU6 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Shank3Q4ACU6 Gm27148-201ENSMUST00000185086 160 ntBASIC7.1□□□□□ -1.27
Shank3Q4ACU6 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Shank3Q4ACU6 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC7.1□□□□□ -1.27
Shank3Q4ACU6 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC7.1□□□□□ -1.27
Shank3Q4ACU6 Gm33952-201ENSMUST00000197795 408 ntBASIC7.1□□□□□ -1.27
Shank3Q4ACU6 8030487O14Rik-201ENSMUST00000200244 903 ntBASIC7.1□□□□□ -1.27
Shank3Q4ACU6 Gm9038-201ENSMUST00000203400 604 ntBASIC7.1□□□□□ -1.27
Shank3Q4ACU6 4933411E02Rik-201ENSMUST00000216779 1030 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Shank3Q4ACU6 AC153943.1-201ENSMUST00000219312 256 ntBASIC7.1□□□□□ -1.27
Shank3Q4ACU6 AC125405.1-201ENSMUST00000226406 589 ntBASIC7.1□□□□□ -1.27
Shank3Q4ACU6 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Shank3Q4ACU6 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Shank3Q4ACU6 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Shank3Q4ACU6 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Shank3Q4ACU6 Olfr472-201ENSMUST00000209670 5290 ntAPPRIS P1 TSL 3 BASIC7.1□□□□□ -1.27
Shank3Q4ACU6 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC7.1□□□□□ -1.27
Shank3Q4ACU6 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Shank3Q4ACU6 9530036M11Rik-201ENSMUST00000138767 1996 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Shank3Q4ACU6 Olfr1272-202ENSMUST00000117141 2442 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Shank3Q4ACU6 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
Shank3Q4ACU6 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Shank3Q4ACU6 Gm36814-201ENSMUST00000197457 1755 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Shank3Q4ACU6 Olfr54-203ENSMUST00000217480 5048 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Shank3Q4ACU6 Slc41a2-201ENSMUST00000039956 4742 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Shank3Q4ACU6 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Shank3Q4ACU6 Gm42923-201ENSMUST00000198438 2896 ntBASIC7.1□□□□□ -1.27
Shank3Q4ACU6 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Shank3Q4ACU6 Ccdc83-202ENSMUST00000107220 1408 ntAPPRIS ALT2 TSL 2 BASIC7.1□□□□□ -1.27
Shank3Q4ACU6 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Shank3Q4ACU6 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC7.1□□□□□ -1.27
Shank3Q4ACU6 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
Shank3Q4ACU6 Gm26310-201ENSMUST00000157766 117 ntBASIC7.1□□□□□ -1.27
Shank3Q4ACU6 Gm24735-201ENSMUST00000158859 118 ntBASIC7.1□□□□□ -1.27
Shank3Q4ACU6 Gm16571-201ENSMUST00000159112 291 ntBASIC7.1□□□□□ -1.27
Shank3Q4ACU6 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC7.1□□□□□ -1.27
Shank3Q4ACU6 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC7.1□□□□□ -1.27
Shank3Q4ACU6 Gm37710-201ENSMUST00000193501 1274 ntBASIC7.1□□□□□ -1.27
Shank3Q4ACU6 Gm44108-201ENSMUST00000203525 422 ntBASIC7.1□□□□□ -1.27
Shank3Q4ACU6 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC7.1□□□□□ -1.27
Shank3Q4ACU6 AC238676.3-201ENSMUST00000223042 154 ntBASIC7.1□□□□□ -1.27
Shank3Q4ACU6 n-R5s65-201ENSMUST00000082614 117 ntBASIC7.1□□□□□ -1.27
Shank3Q4ACU6 AC115289.2-201ENSMUST00000223836 2803 ntBASIC7.1□□□□□ -1.27
Shank3Q4ACU6 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Shank3Q4ACU6 Pkd1-201ENSMUST00000035565 14164 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Shank3Q4ACU6 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC7.09□□□□□ -1.27
Shank3Q4ACU6 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Shank3Q4ACU6 Mef2c-213ENSMUST00000197681 2753 ntTSL 5 BASIC7.09□□□□□ -1.27
Shank3Q4ACU6 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Shank3Q4ACU6 AC165273.1-201ENSMUST00000222780 2452 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Shank3Q4ACU6 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Shank3Q4ACU6 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Shank3Q4ACU6 Vmn1r70-203ENSMUST00000226255 4868 ntAPPRIS P2 BASIC7.09□□□□□ -1.27
Shank3Q4ACU6 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Shank3Q4ACU6 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Shank3Q4ACU6 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Shank3Q4ACU6 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Shank3Q4ACU6 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Shank3Q4ACU6 Gm42658-201ENSMUST00000197199 1575 ntBASIC7.09□□□□□ -1.27
Shank3Q4ACU6 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Shank3Q4ACU6 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC7.09□□□□□ -1.27
Shank3Q4ACU6 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Shank3Q4ACU6 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC7.09□□□□□ -1.27
Shank3Q4ACU6 Tep1-201ENSMUST00000006444 8171 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Shank3Q4ACU6 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Shank3Q4ACU6 AC156031.1-201ENSMUST00000217288 2555 ntBASIC7.09□□□□□ -1.27
Shank3Q4ACU6 Gm5405-201ENSMUST00000120478 609 ntBASIC7.09□□□□□ -1.27
Shank3Q4ACU6 Gm12322-201ENSMUST00000121605 389 ntBASIC7.09□□□□□ -1.27
Shank3Q4ACU6 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC7.09□□□□□ -1.27
Shank3Q4ACU6 Gm23279-201ENSMUST00000157912 97 ntBASIC7.09□□□□□ -1.27
Shank3Q4ACU6 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Shank3Q4ACU6 Gm24103-201ENSMUST00000174930 77 ntBASIC7.09□□□□□ -1.27
Shank3Q4ACU6 Gm22132-201ENSMUST00000175316 100 ntBASIC7.09□□□□□ -1.27
Shank3Q4ACU6 Gm27209-201ENSMUST00000183834 898 ntTSL 3 BASIC7.09□□□□□ -1.27
Shank3Q4ACU6 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC7.09□□□□□ -1.27
Shank3Q4ACU6 Gm2059-201ENSMUST00000212025 287 ntBASIC7.09□□□□□ -1.27
Shank3Q4ACU6 AC132317.2-201ENSMUST00000227301 519 ntBASIC7.09□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms