Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Nkx3-1P97436 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
Nkx3-1P97436 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC5.06□□□□□ -1.6
Nkx3-1P97436 Gm12488-201ENSMUST00000122449 499 ntBASIC5.06□□□□□ -1.6
Nkx3-1P97436 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC5.06□□□□□ -1.6
Nkx3-1P97436 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC5.06□□□□□ -1.6
Nkx3-1P97436 Gm22596-201ENSMUST00000157601 316 ntBASIC5.06□□□□□ -1.6
Nkx3-1P97436 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC5.06□□□□□ -1.6
Nkx3-1P97436 A730017C20Rik-206ENSMUST00000175830 731 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Nkx3-1P97436 Gm26738-201ENSMUST00000181312 601 ntBASIC5.06□□□□□ -1.6
Nkx3-1P97436 Gm29377-201ENSMUST00000185892 1161 ntTSL 5 BASIC5.06□□□□□ -1.6
Nkx3-1P97436 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC5.06□□□□□ -1.6
Nkx3-1P97436 Gm28066-201ENSMUST00000188657 472 ntBASIC5.06□□□□□ -1.6
Nkx3-1P97436 Gm29467-202ENSMUST00000189669 935 ntTSL 5 BASIC5.06□□□□□ -1.6
Nkx3-1P97436 Gm29633-207ENSMUST00000190523 737 ntTSL 5 BASIC5.06□□□□□ -1.6
Nkx3-1P97436 Gm18348-201ENSMUST00000191227 820 ntBASIC5.06□□□□□ -1.6
Nkx3-1P97436 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Nkx3-1P97436 Gm4374-201ENSMUST00000204929 424 ntBASIC5.06□□□□□ -1.6
Nkx3-1P97436 Olfr1295-201ENSMUST00000207283 1282 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
Nkx3-1P97436 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC5.06□□□□□ -1.6
Nkx3-1P97436 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC5.06□□□□□ -1.6
Nkx3-1P97436 Vmn1r67-201ENSMUST00000055964 999 ntAPPRIS P2 BASIC5.06□□□□□ -1.6
Nkx3-1P97436 Olfr161-201ENSMUST00000061541 942 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Nkx3-1P97436 Vmn1r8-201ENSMUST00000078186 1213 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Nkx3-1P97436 Mir337-201ENSMUST00000083592 97 ntBASIC5.06□□□□□ -1.6
Nkx3-1P97436 Gm25682-201ENSMUST00000083942 164 ntBASIC5.06□□□□□ -1.6
Nkx3-1P97436 Olfr568-201ENSMUST00000098216 942 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Nkx3-1P97436 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC5.06□□□□□ -1.6
Nkx3-1P97436 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
Nkx3-1P97436 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC5.06□□□□□ -1.6
Nkx3-1P97436 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Nkx3-1P97436 Gm43469-201ENSMUST00000196084 4634 ntBASIC5.06□□□□□ -1.6
Nkx3-1P97436 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
Nkx3-1P97436 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Nkx3-1P97436 Gm9968-201ENSMUST00000147504 2990 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Nkx3-1P97436 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Nkx3-1P97436 Lipk-203ENSMUST00000225505 2083 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Nkx3-1P97436 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Nkx3-1P97436 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Nkx3-1P97436 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Nkx3-1P97436 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC5.06□□□□□ -1.6
Nkx3-1P97436 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Nkx3-1P97436 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Nkx3-1P97436 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Nkx3-1P97436 Gm44193-201ENSMUST00000204822 2523 ntBASIC5.05□□□□□ -1.6
Nkx3-1P97436 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Nkx3-1P97436 Piga-202ENSMUST00000112255 3597 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Nkx3-1P97436 Gm38325-201ENSMUST00000194507 1377 ntBASIC5.05□□□□□ -1.6
Nkx3-1P97436 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Nkx3-1P97436 Olfr651-203ENSMUST00000216904 1598 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Nkx3-1P97436 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC5.05□□□□□ -1.6
Nkx3-1P97436 G6pd2-201ENSMUST00000053876 2348 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Nkx3-1P97436 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Nkx3-1P97436 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Nkx3-1P97436 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC5.05□□□□□ -1.6
Nkx3-1P97436 Mup-ps19-201ENSMUST00000120390 519 ntBASIC5.05□□□□□ -1.6
Nkx3-1P97436 Gm13537-201ENSMUST00000120467 267 ntBASIC5.05□□□□□ -1.6
Nkx3-1P97436 1700019G24Rik-201ENSMUST00000130004 503 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Nkx3-1P97436 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC5.05□□□□□ -1.6
Nkx3-1P97436 Mir1970-201ENSMUST00000157839 104 ntBASIC5.05□□□□□ -1.6
Nkx3-1P97436 Gm28188-201ENSMUST00000190483 236 ntBASIC5.05□□□□□ -1.6
Nkx3-1P97436 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC5.05□□□□□ -1.6
Nkx3-1P97436 Gm38670-201ENSMUST00000199248 77 ntBASIC5.05□□□□□ -1.6
Nkx3-1P97436 Gm7181-201ENSMUST00000202197 434 ntBASIC5.05□□□□□ -1.6
Nkx3-1P97436 Gm44219-201ENSMUST00000203005 273 ntBASIC5.05□□□□□ -1.6
Nkx3-1P97436 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC5.05□□□□□ -1.6
Nkx3-1P97436 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC5.05□□□□□ -1.6
Nkx3-1P97436 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC5.05□□□□□ -1.6
Nkx3-1P97436 Gm45777-201ENSMUST00000213009 301 ntBASIC5.05□□□□□ -1.6
Nkx3-1P97436 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC5.05□□□□□ -1.6
Nkx3-1P97436 AC132384.8-201ENSMUST00000218152 1204 ntBASIC5.05□□□□□ -1.6
Nkx3-1P97436 AC164164.2-201ENSMUST00000221809 785 ntBASIC5.05□□□□□ -1.6
Nkx3-1P97436 AC124408.2-201ENSMUST00000228168 645 ntBASIC5.05□□□□□ -1.6
Nkx3-1P97436 Olfr678-201ENSMUST00000098160 942 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Nkx3-1P97436 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Nkx3-1P97436 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Nkx3-1P97436 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Nkx3-1P97436 Olfr378-201ENSMUST00000069790 1508 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
Nkx3-1P97436 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Nkx3-1P97436 Gm43872-201ENSMUST00000203218 2213 ntBASIC5.05□□□□□ -1.6
Nkx3-1P97436 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Nkx3-1P97436 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Nkx3-1P97436 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC5.04□□□□□ -1.6
Nkx3-1P97436 Glb1l3-203ENSMUST00000210274 2532 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Nkx3-1P97436 Gm20300-201ENSMUST00000214634 3440 ntBASIC5.04□□□□□ -1.6
Nkx3-1P97436 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Nkx3-1P97436 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Nkx3-1P97436 Gm18066-201ENSMUST00000210904 1774 ntBASIC5.04□□□□□ -1.6
Nkx3-1P97436 Gm43180-201ENSMUST00000197541 2886 ntBASIC5.04□□□□□ -1.6
Nkx3-1P97436 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Nkx3-1P97436 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Nkx3-1P97436 Ankrd55-205ENSMUST00000223871 3209 ntBASIC5.04□□□□□ -1.6
Nkx3-1P97436 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Nkx3-1P97436 Gm14606-201ENSMUST00000117078 1155 ntBASIC5.04□□□□□ -1.6
Nkx3-1P97436 Gm15660-201ENSMUST00000118997 478 ntBASIC5.04□□□□□ -1.6
Nkx3-1P97436 Gm11617-201ENSMUST00000119609 639 ntBASIC5.04□□□□□ -1.6
Nkx3-1P97436 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC5.04□□□□□ -1.6
Nkx3-1P97436 Gm15877-201ENSMUST00000121897 964 ntBASIC5.04□□□□□ -1.6
Nkx3-1P97436 Gm22529-201ENSMUST00000158817 123 ntBASIC5.04□□□□□ -1.6
Nkx3-1P97436 Gm17024-201ENSMUST00000165676 634 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms