Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Sf3b6P59708 Hsp90aa1-201ENSMUST00000021698 2852 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Sf3b6P59708 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sf3b6P59708 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Sf3b6P59708 Efcab2-201ENSMUST00000027775 3580 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sf3b6P59708 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Sf3b6P59708 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sf3b6P59708 Olfr829-202ENSMUST00000212229 2590 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Sf3b6P59708 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sf3b6P59708 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Sf3b6P59708 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Sf3b6P59708 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC6.06□□□□□ -1.44
Sf3b6P59708 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Sf3b6P59708 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sf3b6P59708 Gm44620-201ENSMUST00000209183 2887 ntBASIC6.06□□□□□ -1.44
Sf3b6P59708 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Sf3b6P59708 AC022682.2-202ENSMUST00000224394 3943 ntBASIC6.06□□□□□ -1.44
Sf3b6P59708 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sf3b6P59708 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Sf3b6P59708 Gm10373-201ENSMUST00000100683 668 ntTSL 2 BASIC6.06□□□□□ -1.44
Sf3b6P59708 Ighv1-66-201ENSMUST00000103537 399 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Sf3b6P59708 Gm24284-201ENSMUST00000104240 142 ntBASIC6.06□□□□□ -1.44
Sf3b6P59708 Olfr20-201ENSMUST00000108465 1061 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Sf3b6P59708 Gm15001-201ENSMUST00000117657 795 ntBASIC6.06□□□□□ -1.44
Sf3b6P59708 Gm14624-201ENSMUST00000117746 192 ntBASIC6.06□□□□□ -1.44
Sf3b6P59708 Gm14755-201ENSMUST00000118037 384 ntBASIC6.06□□□□□ -1.44
Sf3b6P59708 Gm12713-201ENSMUST00000118404 764 ntBASIC6.06□□□□□ -1.44
Sf3b6P59708 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Sf3b6P59708 Gm15791-201ENSMUST00000120365 319 ntBASIC6.06□□□□□ -1.44
Sf3b6P59708 Gm11252-201ENSMUST00000120572 939 ntBASIC6.06□□□□□ -1.44
Sf3b6P59708 Gm11496-201ENSMUST00000128078 581 ntTSL 2 BASIC6.06□□□□□ -1.44
Sf3b6P59708 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Sf3b6P59708 Gm15642-201ENSMUST00000148057 311 ntTSL 5 BASIC6.06□□□□□ -1.44
Sf3b6P59708 Bloc1s6os-201ENSMUST00000150154 696 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Sf3b6P59708 Gm15418-201ENSMUST00000151014 677 ntTSL 5 BASIC6.06□□□□□ -1.44
Sf3b6P59708 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Sf3b6P59708 Gm25722-201ENSMUST00000157498 279 ntBASIC6.06□□□□□ -1.44
Sf3b6P59708 Gm24057-201ENSMUST00000158616 302 ntBASIC6.06□□□□□ -1.44
Sf3b6P59708 Gm7991-201ENSMUST00000168668 591 ntBASIC6.06□□□□□ -1.44
Sf3b6P59708 Gm18354-201ENSMUST00000173515 1068 ntBASIC6.06□□□□□ -1.44
Sf3b6P59708 Gm6155-201ENSMUST00000173735 341 ntBASIC6.06□□□□□ -1.44
Sf3b6P59708 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC6.06□□□□□ -1.44
Sf3b6P59708 Pantr1-203ENSMUST00000176154 514 ntTSL 5 BASIC6.06□□□□□ -1.44
Sf3b6P59708 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC6.06□□□□□ -1.44
Sf3b6P59708 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC6.06□□□□□ -1.44
Sf3b6P59708 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC6.06□□□□□ -1.44
Sf3b6P59708 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC6.06□□□□□ -1.44
Sf3b6P59708 Gm4956-202ENSMUST00000178869 672 ntBASIC6.06□□□□□ -1.44
Sf3b6P59708 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC6.06□□□□□ -1.44
Sf3b6P59708 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC6.06□□□□□ -1.44
Sf3b6P59708 Gm5974-201ENSMUST00000181607 986 ntBASIC6.06□□□□□ -1.44
Sf3b6P59708 Gm5787-201ENSMUST00000183049 1038 ntBASIC6.06□□□□□ -1.44
Sf3b6P59708 Gm34342-201ENSMUST00000192139 335 ntTSL 3 BASIC6.06□□□□□ -1.44
Sf3b6P59708 Gm4856-201ENSMUST00000192696 1091 ntBASIC6.06□□□□□ -1.44
Sf3b6P59708 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Sf3b6P59708 Gm22897-202ENSMUST00000197782 127 ntBASIC6.06□□□□□ -1.44
Sf3b6P59708 Gm9173-201ENSMUST00000198054 400 ntBASIC6.06□□□□□ -1.44
Sf3b6P59708 Gm43227-201ENSMUST00000202239 677 ntBASIC6.06□□□□□ -1.44
Sf3b6P59708 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Sf3b6P59708 Gm38430-201ENSMUST00000209888 1240 ntBASIC6.06□□□□□ -1.44
Sf3b6P59708 Gm7789-201ENSMUST00000210473 701 ntTSL 3 BASIC6.06□□□□□ -1.44
Sf3b6P59708 4930434F21Rik-201ENSMUST00000214381 742 ntTSL 5 BASIC6.06□□□□□ -1.44
Sf3b6P59708 Gm6581-201ENSMUST00000214545 260 ntBASIC6.06□□□□□ -1.44
Sf3b6P59708 Gm46192-201ENSMUST00000217894 326 ntBASIC6.06□□□□□ -1.44
Sf3b6P59708 AC154851.1-201ENSMUST00000221591 655 ntBASIC6.06□□□□□ -1.44
Sf3b6P59708 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC6.06□□□□□ -1.44
Sf3b6P59708 AC154487.1-201ENSMUST00000224649 226 ntBASIC6.06□□□□□ -1.44
Sf3b6P59708 AC117949.1-201ENSMUST00000225547 419 ntBASIC6.06□□□□□ -1.44
Sf3b6P59708 CT572983.1-201ENSMUST00000226895 514 ntBASIC6.06□□□□□ -1.44
Sf3b6P59708 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Sf3b6P59708 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sf3b6P59708 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sf3b6P59708 Olfr1361-201ENSMUST00000055615 954 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Sf3b6P59708 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Sf3b6P59708 Defb46-201ENSMUST00000095436 174 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sf3b6P59708 Bcl2a1a-201ENSMUST00000098485 819 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sf3b6P59708 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Sf3b6P59708 Gm28322-201ENSMUST00000185627 1475 ntBASIC6.06□□□□□ -1.44
Sf3b6P59708 Dnah5-201ENSMUST00000067048 15637 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Sf3b6P59708 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sf3b6P59708 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Sf3b6P59708 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sf3b6P59708 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Sf3b6P59708 AC161595.1-201ENSMUST00000216389 1993 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Sf3b6P59708 Gm43921-201ENSMUST00000204296 1792 ntBASIC6.06□□□□□ -1.44
Sf3b6P59708 Aadat-202ENSMUST00000209338 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sf3b6P59708 Gm29730-201ENSMUST00000192986 1396 ntBASIC6.06□□□□□ -1.44
Sf3b6P59708 Gm36981-201ENSMUST00000192340 4485 ntBASIC6.05□□□□□ -1.44
Sf3b6P59708 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Sf3b6P59708 Gm29220-201ENSMUST00000185862 1501 ntTSL 5 BASIC6.05□□□□□ -1.44
Sf3b6P59708 Gm28966-201ENSMUST00000188951 1501 ntTSL 5 BASIC6.05□□□□□ -1.44
Sf3b6P59708 AC156636.2-201ENSMUST00000218845 4557 ntBASIC6.05□□□□□ -1.44
Sf3b6P59708 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Sf3b6P59708 Gm39465-201ENSMUST00000213810 9813 ntTSL 3 BASIC6.05□□□□□ -1.44
Sf3b6P59708 B130024G19Rik-203ENSMUST00000190320 5451 ntTSL 5 BASIC6.05□□□□□ -1.44
Sf3b6P59708 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC6.05□□□□□ -1.44
Sf3b6P59708 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Sf3b6P59708 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Sf3b6P59708 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
Sf3b6P59708 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms