Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm44219-201ENSMUST00000203005 273 ntBASIC6.29□□□□□ -1.4
NcanP55066 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC6.29□□□□□ -1.4
NcanP55066 Gm18863-201ENSMUST00000217004 1299 ntBASIC6.29□□□□□ -1.4
NcanP55066 AC120347.2-201ENSMUST00000222224 2015 ntBASIC6.29□□□□□ -1.4
NcanP55066 AC154636.1-201ENSMUST00000223226 126 ntBASIC6.29□□□□□ -1.4
NcanP55066 AC136019.1-201ENSMUST00000226503 1412 ntBASIC6.29□□□□□ -1.4
NcanP55066 AC165106.1-201ENSMUST00000227580 408 ntBASIC6.29□□□□□ -1.4
NcanP55066 Olfr736-201ENSMUST00000058965 939 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
NcanP55066 Gm23514-201ENSMUST00000082827 130 ntBASIC6.29□□□□□ -1.4
NcanP55066 Olfr894-201ENSMUST00000093866 949 ntAPPRIS P2 BASIC6.29□□□□□ -1.4
NcanP55066 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
NcanP55066 Gm4847-201ENSMUST00000046662 3012 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
NcanP55066 Zfp345-201ENSMUST00000109914 2734 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
NcanP55066 Celf1-207ENSMUST00000111452 7800 ntAPPRIS P4 TSL 5 BASIC6.29□□□□□ -1.4
NcanP55066 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC6.29□□□□□ -1.4
NcanP55066 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NcanP55066 AC164107.1-202ENSMUST00000228953 1816 ntBASIC6.29□□□□□ -1.4
NcanP55066 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
NcanP55066 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
NcanP55066 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
NcanP55066 Olfr976-204ENSMUST00000217630 2952 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
NcanP55066 Gm45001-201ENSMUST00000208279 2515 ntBASIC6.29□□□□□ -1.4
NcanP55066 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
NcanP55066 B020004C17Rik-201ENSMUST00000178161 2385 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
NcanP55066 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC6.28□□□□□ -1.4
NcanP55066 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
NcanP55066 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC6.28□□□□□ -1.4
NcanP55066 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
NcanP55066 Bbs12-201ENSMUST00000057975 2433 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
NcanP55066 Gm38381-201ENSMUST00000193594 2275 ntBASIC6.28□□□□□ -1.4
NcanP55066 Gm37180-201ENSMUST00000195335 2819 ntBASIC6.28□□□□□ -1.4
NcanP55066 Nlrp1a-202ENSMUST00000108518 3767 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
NcanP55066 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
NcanP55066 Lama2-201ENSMUST00000092639 9614 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
NcanP55066 Vmn2r10-201ENSMUST00000079163 2544 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
NcanP55066 Amer1-201ENSMUST00000084535 8496 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
NcanP55066 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
NcanP55066 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC6.28□□□□□ -1.4
NcanP55066 Gm43872-201ENSMUST00000203218 2213 ntBASIC6.28□□□□□ -1.4
NcanP55066 Gm43728-201ENSMUST00000198817 2622 ntBASIC6.28□□□□□ -1.4
NcanP55066 Gm7108-201ENSMUST00000118038 3407 ntBASIC6.28□□□□□ -1.4
NcanP55066 Gm13770-201ENSMUST00000117149 305 ntBASIC6.28□□□□□ -1.4
NcanP55066 Gm12874-201ENSMUST00000117190 913 ntBASIC6.28□□□□□ -1.4
NcanP55066 Gm12181-201ENSMUST00000121448 531 ntBASIC6.28□□□□□ -1.4
NcanP55066 Gm15075-201ENSMUST00000122187 477 ntBASIC6.28□□□□□ -1.4
NcanP55066 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC6.28□□□□□ -1.4
NcanP55066 Obox4-ps38-201ENSMUST00000175961 724 ntBASIC6.28□□□□□ -1.4
NcanP55066 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
NcanP55066 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC6.28□□□□□ -1.4
NcanP55066 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC6.28□□□□□ -1.4
NcanP55066 Gm45525-201ENSMUST00000210800 389 ntBASIC6.28□□□□□ -1.4
NcanP55066 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC6.28□□□□□ -1.4
NcanP55066 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC6.28□□□□□ -1.4
NcanP55066 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
NcanP55066 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
NcanP55066 Olfr1205-201ENSMUST00000076438 924 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
NcanP55066 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
NcanP55066 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
NcanP55066 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
NcanP55066 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
NcanP55066 Akap2-201ENSMUST00000043456 7211 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
NcanP55066 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
NcanP55066 Unc13c-202ENSMUST00000184666 8796 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
NcanP55066 Cytip-201ENSMUST00000028175 6110 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
NcanP55066 Cnot2-203ENSMUST00000105267 2800 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
NcanP55066 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
NcanP55066 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
NcanP55066 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
NcanP55066 Fkbp15-202ENSMUST00000084528 3329 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
NcanP55066 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC6.28□□□□□ -1.4
NcanP55066 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
NcanP55066 Myot-201ENSMUST00000025349 2209 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.4
NcanP55066 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.4
NcanP55066 Adamts12-201ENSMUST00000061318 8579 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.4
NcanP55066 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC6.27□□□□□ -1.4
NcanP55066 Gm39465-201ENSMUST00000213810 9813 ntTSL 3 BASIC6.27□□□□□ -1.41
NcanP55066 Nceh1-201ENSMUST00000046515 4480 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
NcanP55066 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
NcanP55066 Cntn5-202ENSMUST00000160216 4192 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
NcanP55066 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
NcanP55066 A130050O07Rik-201ENSMUST00000191963 3023 ntBASIC6.27□□□□□ -1.41
NcanP55066 AC158605.3-201ENSMUST00000218999 2538 ntBASIC6.27□□□□□ -1.41
NcanP55066 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
NcanP55066 Gm15170-201ENSMUST00000121593 2023 ntBASIC6.27□□□□□ -1.41
NcanP55066 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
NcanP55066 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
NcanP55066 Gm16082-201ENSMUST00000115992 377 ntBASIC6.27□□□□□ -1.41
NcanP55066 Gm15971-201ENSMUST00000119372 211 ntBASIC6.27□□□□□ -1.41
NcanP55066 Gm12190-201ENSMUST00000120001 187 ntBASIC6.27□□□□□ -1.41
NcanP55066 Gm4852-201ENSMUST00000121202 729 ntBASIC6.27□□□□□ -1.41
NcanP55066 Gm11910-201ENSMUST00000121624 432 ntBASIC6.27□□□□□ -1.41
NcanP55066 Gm11759-201ENSMUST00000121742 464 ntBASIC6.27□□□□□ -1.41
NcanP55066 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC6.27□□□□□ -1.41
NcanP55066 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
NcanP55066 Gm11507-201ENSMUST00000156462 412 ntBASIC6.27□□□□□ -1.41
NcanP55066 Gm23553-201ENSMUST00000157817 295 ntBASIC6.27□□□□□ -1.41
NcanP55066 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
NcanP55066 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
NcanP55066 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC6.27□□□□□ -1.41
NcanP55066 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC6.27□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms