Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Sox3P53784 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Sox3P53784 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Sox3P53784 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Sox3P53784 AC158779.2-201ENSMUST00000227902 1947 ntBASIC5.62□□□□□ -1.51
Sox3P53784 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Sox3P53784 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Sox3P53784 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Sox3P53784 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Sox3P53784 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Sox3P53784 Gm36936-201ENSMUST00000194508 2749 ntBASIC5.61□□□□□ -1.51
Sox3P53784 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Sox3P53784 Gm18852-201ENSMUST00000184149 3593 ntBASIC5.61□□□□□ -1.51
Sox3P53784 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Sox3P53784 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Sox3P53784 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Sox3P53784 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC5.61□□□□□ -1.51
Sox3P53784 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Sox3P53784 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Sox3P53784 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Sox3P53784 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Sox3P53784 S100a9-202ENSMUST00000117167 519 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Sox3P53784 Gm11911-201ENSMUST00000117938 1023 ntBASIC5.61□□□□□ -1.51
Sox3P53784 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Sox3P53784 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
Sox3P53784 Gm22277-201ENSMUST00000157204 277 ntBASIC5.61□□□□□ -1.51
Sox3P53784 Wnk1-218ENSMUST00000161512 1426 ntBASIC5.61□□□□□ -1.51
Sox3P53784 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Sox3P53784 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC5.61□□□□□ -1.51
Sox3P53784 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC5.61□□□□□ -1.51
Sox3P53784 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Sox3P53784 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Sox3P53784 Gm7048-201ENSMUST00000199395 1891 ntBASIC5.61□□□□□ -1.51
Sox3P53784 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC5.61□□□□□ -1.51
Sox3P53784 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Sox3P53784 Gm4587-201ENSMUST00000209135 637 ntBASIC5.61□□□□□ -1.51
Sox3P53784 Gm6009-201ENSMUST00000210848 280 ntBASIC5.61□□□□□ -1.51
Sox3P53784 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Sox3P53784 Gm18705-201ENSMUST00000215985 913 ntBASIC5.61□□□□□ -1.51
Sox3P53784 Gm20276-201ENSMUST00000216122 2648 ntBASIC5.61□□□□□ -1.51
Sox3P53784 Olfr610-203ENSMUST00000217627 1643 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Sox3P53784 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC5.61□□□□□ -1.51
Sox3P53784 Gm7557-201ENSMUST00000221935 865 ntBASIC5.61□□□□□ -1.51
Sox3P53784 Gm18940-201ENSMUST00000222518 871 ntBASIC5.61□□□□□ -1.51
Sox3P53784 AC154481.1-201ENSMUST00000223532 331 ntBASIC5.61□□□□□ -1.51
Sox3P53784 AC154806.3-201ENSMUST00000227376 439 ntBASIC5.61□□□□□ -1.51
Sox3P53784 AC154806.4-201ENSMUST00000227406 439 ntBASIC5.61□□□□□ -1.51
Sox3P53784 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Sox3P53784 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Sox3P53784 S100a9-201ENSMUST00000069960 512 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Sox3P53784 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Sox3P53784 Olfr1308-201ENSMUST00000099605 963 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Sox3P53784 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Sox3P53784 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Sox3P53784 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
Sox3P53784 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Sox3P53784 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Sox3P53784 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Sox3P53784 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Sox3P53784 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Sox3P53784 Gm18853-201ENSMUST00000183629 3596 ntBASIC5.6□□□□□ -1.51
Sox3P53784 BC030870-201ENSMUST00000098713 1507 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Sox3P53784 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Sox3P53784 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Sox3P53784 Pifo-201ENSMUST00000010280 956 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
Sox3P53784 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC5.6□□□□□ -1.51
Sox3P53784 Gm9836-201ENSMUST00000117132 216 ntBASIC5.6□□□□□ -1.51
Sox3P53784 Gm13811-201ENSMUST00000117800 256 ntBASIC5.6□□□□□ -1.51
Sox3P53784 Gm11737-201ENSMUST00000118713 468 ntBASIC5.6□□□□□ -1.51
Sox3P53784 Gm7879-201ENSMUST00000122204 774 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Sox3P53784 Gm13738-201ENSMUST00000122437 469 ntBASIC5.6□□□□□ -1.51
Sox3P53784 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Sox3P53784 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Sox3P53784 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC5.6□□□□□ -1.51
Sox3P53784 Gm3307-201ENSMUST00000176164 632 ntBASIC5.6□□□□□ -1.51
Sox3P53784 Gm27193-201ENSMUST00000184217 586 ntBASIC5.6□□□□□ -1.51
Sox3P53784 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC5.6□□□□□ -1.51
Sox3P53784 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Sox3P53784 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC5.6□□□□□ -1.51
Sox3P53784 Gm37004-201ENSMUST00000193021 683 ntTSL 5 BASIC5.6□□□□□ -1.51
Sox3P53784 Gm43929-201ENSMUST00000203025 409 ntBASIC5.6□□□□□ -1.51
Sox3P53784 Gm26911-202ENSMUST00000204244 763 ntTSL 5 BASIC5.6□□□□□ -1.51
Sox3P53784 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC5.6□□□□□ -1.51
Sox3P53784 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Sox3P53784 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC5.6□□□□□ -1.51
Sox3P53784 Gm45777-201ENSMUST00000213009 301 ntBASIC5.6□□□□□ -1.51
Sox3P53784 Gm8863-201ENSMUST00000216630 926 ntBASIC5.6□□□□□ -1.51
Sox3P53784 AC124420.1-201ENSMUST00000219779 791 ntBASIC5.6□□□□□ -1.51
Sox3P53784 AC122371.2-201ENSMUST00000220583 366 ntBASIC5.6□□□□□ -1.51
Sox3P53784 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Sox3P53784 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC5.6□□□□□ -1.51
Sox3P53784 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Sox3P53784 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Sox3P53784 Gm7108-201ENSMUST00000118038 3407 ntBASIC5.6□□□□□ -1.51
Sox3P53784 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Sox3P53784 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
Sox3P53784 Olfr446-202ENSMUST00000215369 4399 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Sox3P53784 Lipk-203ENSMUST00000225505 2083 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Sox3P53784 Gm43343-201ENSMUST00000202454 1926 ntBASIC5.6□□□□□ -1.51
Sox3P53784 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms