Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Rfx1P48377 Vmn1r213-203ENSMUST00000228031 3367 ntAPPRIS ALT2 BASIC7.78□□□□□ -1.16
Rfx1P48377 Arhgap32-203ENSMUST00000174641 13568 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Rfx1P48377 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Rfx1P48377 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC7.78□□□□□ -1.16
Rfx1P48377 Gm24519-201ENSMUST00000104507 132 ntBASIC7.78□□□□□ -1.16
Rfx1P48377 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC7.78□□□□□ -1.16
Rfx1P48377 Rpl36a-201ENSMUST00000113211 483 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Rfx1P48377 Gm12677-201ENSMUST00000118668 426 ntBASIC7.78□□□□□ -1.16
Rfx1P48377 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC7.78□□□□□ -1.16
Rfx1P48377 Gm13720-201ENSMUST00000120741 196 ntBASIC7.78□□□□□ -1.16
Rfx1P48377 Gm16152-201ENSMUST00000131663 872 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Rfx1P48377 Olfr367-ps-202ENSMUST00000143957 942 ntBASIC7.78□□□□□ -1.16
Rfx1P48377 Gm14097-201ENSMUST00000147868 470 ntTSL 3 BASIC7.78□□□□□ -1.16
Rfx1P48377 Gm25979-201ENSMUST00000157177 138 ntBASIC7.78□□□□□ -1.16
Rfx1P48377 Gm17149-201ENSMUST00000164712 375 ntBASIC7.78□□□□□ -1.16
Rfx1P48377 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Rfx1P48377 Krtap11-1-201ENSMUST00000171542 1008 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Rfx1P48377 Gm27019-201ENSMUST00000183056 404 ntBASIC7.78□□□□□ -1.16
Rfx1P48377 Ighv13-2-202ENSMUST00000183954 302 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Rfx1P48377 Gm29377-201ENSMUST00000185892 1161 ntTSL 5 BASIC7.78□□□□□ -1.16
Rfx1P48377 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC7.78□□□□□ -1.16
Rfx1P48377 Gm37771-201ENSMUST00000193121 265 ntBASIC7.78□□□□□ -1.16
Rfx1P48377 Gm6074-201ENSMUST00000193340 451 ntBASIC7.78□□□□□ -1.16
Rfx1P48377 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC7.78□□□□□ -1.16
Rfx1P48377 Gm1647-201ENSMUST00000195406 735 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Rfx1P48377 Gm42823-201ENSMUST00000197975 256 ntTSL 3 BASIC7.78□□□□□ -1.16
Rfx1P48377 Mrpl24-201ENSMUST00000019854 1226 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Rfx1P48377 Gm43368-201ENSMUST00000200638 409 ntBASIC7.78□□□□□ -1.16
Rfx1P48377 Gm17893-201ENSMUST00000203017 770 ntBASIC7.78□□□□□ -1.16
Rfx1P48377 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Rfx1P48377 Gm6828-201ENSMUST00000207902 1186 ntBASIC7.78□□□□□ -1.16
Rfx1P48377 Gm9604-201ENSMUST00000211175 433 ntBASIC7.78□□□□□ -1.16
Rfx1P48377 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Rfx1P48377 Gm31763-203ENSMUST00000219739 1025 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Rfx1P48377 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC7.78□□□□□ -1.16
Rfx1P48377 Gm26861-206ENSMUST00000222633 1039 ntTSL 5 BASIC7.78□□□□□ -1.16
Rfx1P48377 Gm7252-201ENSMUST00000223284 456 ntBASIC7.78□□□□□ -1.16
Rfx1P48377 AC151730.2-201ENSMUST00000224027 475 ntBASIC7.78□□□□□ -1.16
Rfx1P48377 CT025667.1-201ENSMUST00000225872 382 ntBASIC7.78□□□□□ -1.16
Rfx1P48377 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Rfx1P48377 Gm5185-201ENSMUST00000080271 619 ntBASIC7.78□□□□□ -1.16
Rfx1P48377 Gm23238-201ENSMUST00000083007 164 ntBASIC7.78□□□□□ -1.16
Rfx1P48377 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Rfx1P48377 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Rfx1P48377 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Rfx1P48377 CT030159.1-201ENSMUST00000221580 2261 ntBASIC7.78□□□□□ -1.16
Rfx1P48377 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Rfx1P48377 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Rfx1P48377 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Rfx1P48377 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Rfx1P48377 Gm44675-201ENSMUST00000208188 2927 ntBASIC7.78□□□□□ -1.16
Rfx1P48377 Gm42513-201ENSMUST00000197831 2119 ntBASIC7.78□□□□□ -1.16
Rfx1P48377 Olfr1283-202ENSMUST00000204064 1625 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Rfx1P48377 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Rfx1P48377 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Rfx1P48377 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC7.77□□□□□ -1.16
Rfx1P48377 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC7.77□□□□□ -1.17
Rfx1P48377 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Rfx1P48377 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Rfx1P48377 Ssbp1-202ENSMUST00000114779 4398 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Rfx1P48377 Kif2a-201ENSMUST00000022204 5304 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Rfx1P48377 Gm42614-201ENSMUST00000198724 1554 ntBASIC7.77□□□□□ -1.17
Rfx1P48377 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC7.77□□□□□ -1.17
Rfx1P48377 Gm11357-201ENSMUST00000119758 954 ntBASIC7.77□□□□□ -1.17
Rfx1P48377 Rps12-ps19-201ENSMUST00000119773 400 ntBASIC7.77□□□□□ -1.17
Rfx1P48377 Olfr360-201ENSMUST00000120704 954 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Rfx1P48377 Gm14212-201ENSMUST00000122023 826 ntBASIC7.77□□□□□ -1.17
Rfx1P48377 Gm14349-201ENSMUST00000137155 902 ntBASIC7.77□□□□□ -1.17
Rfx1P48377 Gm14319-201ENSMUST00000142937 703 ntTSL 2 BASIC7.77□□□□□ -1.17
Rfx1P48377 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Rfx1P48377 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
Rfx1P48377 Gm22035-201ENSMUST00000157284 228 ntBASIC7.77□□□□□ -1.17
Rfx1P48377 Gm26393-201ENSMUST00000157625 129 ntBASIC7.77□□□□□ -1.17
Rfx1P48377 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Rfx1P48377 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
Rfx1P48377 Gm26910-201ENSMUST00000180450 698 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Rfx1P48377 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC7.77□□□□□ -1.17
Rfx1P48377 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC7.77□□□□□ -1.17
Rfx1P48377 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC7.77□□□□□ -1.17
Rfx1P48377 Ptma-204ENSMUST00000188533 593 ntTSL 3 BASIC7.77□□□□□ -1.17
Rfx1P48377 Gm37193-201ENSMUST00000193087 513 ntBASIC7.77□□□□□ -1.17
Rfx1P48377 Lamtor3-203ENSMUST00000197064 733 ntAPPRIS P1 TSL 3 BASIC7.77□□□□□ -1.17
Rfx1P48377 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC7.77□□□□□ -1.17
Rfx1P48377 Gm4605-201ENSMUST00000203148 625 ntBASIC7.77□□□□□ -1.17
Rfx1P48377 Gm44225-201ENSMUST00000203582 186 ntBASIC7.77□□□□□ -1.17
Rfx1P48377 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC7.77□□□□□ -1.17
Rfx1P48377 Gm44118-201ENSMUST00000204665 229 ntBASIC7.77□□□□□ -1.17
Rfx1P48377 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC7.77□□□□□ -1.17
Rfx1P48377 Gm45157-201ENSMUST00000208729 401 ntBASIC7.77□□□□□ -1.17
Rfx1P48377 Cd209d-202ENSMUST00000209176 672 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Rfx1P48377 Gm29817-201ENSMUST00000210098 172 ntBASIC7.77□□□□□ -1.17
Rfx1P48377 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC7.77□□□□□ -1.17
Rfx1P48377 RMST_1.1-203ENSMUST00000217866 775 ntTSL 3 BASIC7.77□□□□□ -1.17
Rfx1P48377 Olfr1378-201ENSMUST00000052285 948 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Rfx1P48377 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Rfx1P48377 Ly6c1-201ENSMUST00000065408 844 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
Rfx1P48377 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Rfx1P48377 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Rfx1P48377 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms