Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC7.87□□□□□ -1.15
Col18a1P39061 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC7.87□□□□□ -1.15
Col18a1P39061 Gm42720-201ENSMUST00000196813 300 ntBASIC7.87□□□□□ -1.15
Col18a1P39061 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC7.87□□□□□ -1.15
Col18a1P39061 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC7.87□□□□□ -1.15
Col18a1P39061 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC7.87□□□□□ -1.15
Col18a1P39061 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC7.87□□□□□ -1.15
Col18a1P39061 AC163651.2-202ENSMUST00000222628 1192 ntTSL 5 BASIC7.87□□□□□ -1.15
Col18a1P39061 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Col18a1P39061 Olfr591-201ENSMUST00000074272 945 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Col18a1P39061 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
Col18a1P39061 Olfr704-202ENSMUST00000098141 948 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Col18a1P39061 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Col18a1P39061 Exoc4-201ENSMUST00000052266 4824 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Col18a1P39061 Tecta-203ENSMUST00000160940 7048 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Col18a1P39061 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC7.87□□□□□ -1.15
Col18a1P39061 Gm26814-201ENSMUST00000181178 4149 ntBASIC7.87□□□□□ -1.15
Col18a1P39061 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Col18a1P39061 Alkbh8-201ENSMUST00000053407 3603 ntAPPRIS P2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Col18a1P39061 Gm42607-201ENSMUST00000200221 3393 ntBASIC7.87□□□□□ -1.15
Col18a1P39061 Sema6a-206ENSMUST00000135790 4339 ntTSL 5 BASIC7.87□□□□□ -1.15
Col18a1P39061 Gm13769-202ENSMUST00000214797 2340 ntAPPRIS P1 TSL 3 BASIC7.87□□□□□ -1.15
Col18a1P39061 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Col18a1P39061 Olfr1147-ps1-201ENSMUST00000122179 913 ntBASIC7.87□□□□□ -1.15
Col18a1P39061 Gm16725-201ENSMUST00000138744 1253 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Col18a1P39061 Gm12405-201ENSMUST00000141120 660 ntTSL 3 BASIC7.87□□□□□ -1.15
Col18a1P39061 Gm37676-201ENSMUST00000195496 507 ntBASIC7.87□□□□□ -1.15
Col18a1P39061 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC7.87□□□□□ -1.15
Col18a1P39061 1700129C05Rik-201ENSMUST00000022548 1067 ntAPPRIS P2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Col18a1P39061 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Col18a1P39061 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Col18a1P39061 Olfr780-201ENSMUST00000063168 1025 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Col18a1P39061 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Col18a1P39061 Tas2r129-201ENSMUST00000070991 965 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Col18a1P39061 Olfr313-201ENSMUST00000082220 1074 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Col18a1P39061 n-R5s13-201ENSMUST00000093707 119 ntBASIC7.87□□□□□ -1.15
Col18a1P39061 Gm37101-201ENSMUST00000191656 3660 ntBASIC7.87□□□□□ -1.15
Col18a1P39061 Tubgcp6-202ENSMUST00000109353 7635 ntAPPRIS P2 TSL 5 BASIC7.86□□□□□ -1.15
Col18a1P39061 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Col18a1P39061 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Col18a1P39061 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Col18a1P39061 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Col18a1P39061 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Col18a1P39061 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Col18a1P39061 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Col18a1P39061 Sept3-201ENSMUST00000023095 4731 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Col18a1P39061 Akt3-201ENSMUST00000019843 1511 ntTSL 5 BASIC7.86□□□□□ -1.15
Col18a1P39061 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Col18a1P39061 4933404K08Rik-201ENSMUST00000156977 1434 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Col18a1P39061 Myom1-202ENSMUST00000073211 5602 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
Col18a1P39061 Gm12586-201ENSMUST00000117328 1316 ntBASIC7.86□□□□□ -1.15
Col18a1P39061 Gm30931-202ENSMUST00000211698 1320 ntTSL 3 BASIC7.86□□□□□ -1.15
Col18a1P39061 Tfap2b-201ENSMUST00000027059 5863 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Col18a1P39061 Vps29-203ENSMUST00000118765 713 ntTSL 3 BASIC7.86□□□□□ -1.15
Col18a1P39061 Gm12732-201ENSMUST00000121688 180 ntBASIC7.86□□□□□ -1.15
Col18a1P39061 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC7.86□□□□□ -1.15
Col18a1P39061 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC7.86□□□□□ -1.15
Col18a1P39061 Gm24359-201ENSMUST00000158418 221 ntBASIC7.86□□□□□ -1.15
Col18a1P39061 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC7.86□□□□□ -1.15
Col18a1P39061 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC7.86□□□□□ -1.15
Col18a1P39061 Gm29650-201ENSMUST00000188485 742 ntBASIC7.86□□□□□ -1.15
Col18a1P39061 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC7.86□□□□□ -1.15
Col18a1P39061 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Col18a1P39061 Gm18127-201ENSMUST00000208479 725 ntBASIC7.86□□□□□ -1.15
Col18a1P39061 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC7.86□□□□□ -1.15
Col18a1P39061 Gm34853-201ENSMUST00000211662 509 ntTSL 5 BASIC7.86□□□□□ -1.15
Col18a1P39061 CU024910.1-201ENSMUST00000214310 418 ntBASIC7.86□□□□□ -1.15
Col18a1P39061 AC166830.1-201ENSMUST00000224201 533 ntBASIC7.86□□□□□ -1.15
Col18a1P39061 Prss37-201ENSMUST00000031967 1049 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Col18a1P39061 Olfr686-204ENSMUST00000216613 2613 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Col18a1P39061 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Col18a1P39061 9330178D15Rik-201ENSMUST00000196033 3451 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Col18a1P39061 Gm3234-201ENSMUST00000222644 5061 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Col18a1P39061 Tanc1-208ENSMUST00000139863 7246 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
Col18a1P39061 Olfr452-204ENSMUST00000217701 2813 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Col18a1P39061 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Col18a1P39061 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Col18a1P39061 Gm37875-201ENSMUST00000192101 1498 ntTSL 5 BASIC7.85□□□□□ -1.15
Col18a1P39061 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Col18a1P39061 Zfp934-209ENSMUST00000222746 2206 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Col18a1P39061 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Col18a1P39061 Gm44068-201ENSMUST00000204049 2128 ntBASIC7.85□□□□□ -1.15
Col18a1P39061 Olfr1299-201ENSMUST00000207228 1678 ntAPPRIS P1 TSL 3 BASIC7.85□□□□□ -1.15
Col18a1P39061 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC7.85□□□□□ -1.15
Col18a1P39061 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Col18a1P39061 Gm12641-201ENSMUST00000117874 985 ntBASIC7.85□□□□□ -1.15
Col18a1P39061 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC7.85□□□□□ -1.15
Col18a1P39061 Gm13339-201ENSMUST00000120651 510 ntBASIC7.85□□□□□ -1.15
Col18a1P39061 Gm26310-201ENSMUST00000157766 117 ntBASIC7.85□□□□□ -1.15
Col18a1P39061 Gm22726-201ENSMUST00000158089 179 ntBASIC7.85□□□□□ -1.15
Col18a1P39061 Gm28683-201ENSMUST00000187134 615 ntBASIC7.85□□□□□ -1.15
Col18a1P39061 Gm28840-205ENSMUST00000189320 615 ntBASIC7.85□□□□□ -1.15
Col18a1P39061 Gm28835-203ENSMUST00000190062 615 ntBASIC7.85□□□□□ -1.15
Col18a1P39061 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Col18a1P39061 Gm44733-202ENSMUST00000209063 582 ntTSL 5 BASIC7.85□□□□□ -1.15
Col18a1P39061 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC7.85□□□□□ -1.15
Col18a1P39061 Enkur-201ENSMUST00000027992 1199 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Col18a1P39061 Lilra6-204ENSMUST00000206077 2281 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Col18a1P39061 Prcp-201ENSMUST00000076052 2967 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Col18a1P39061 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms