Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC6.49□□□□□ -1.37
Col2a1P28481 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC6.49□□□□□ -1.37
Col2a1P28481 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC6.49□□□□□ -1.37
Col2a1P28481 Gm45405-201ENSMUST00000211544 609 ntBASIC6.49□□□□□ -1.37
Col2a1P28481 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC6.49□□□□□ -1.37
Col2a1P28481 AC107757.1-201ENSMUST00000226780 357 ntBASIC6.49□□□□□ -1.37
Col2a1P28481 AC154806.3-201ENSMUST00000227376 439 ntBASIC6.49□□□□□ -1.37
Col2a1P28481 AC154806.4-201ENSMUST00000227406 439 ntBASIC6.49□□□□□ -1.37
Col2a1P28481 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col2a1P28481 n-R5s173-201ENSMUST00000082620 119 ntBASIC6.49□□□□□ -1.37
Col2a1P28481 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Col2a1P28481 Cyp2c70-201ENSMUST00000051846 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col2a1P28481 Adamdec1-201ENSMUST00000022641 2442 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col2a1P28481 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col2a1P28481 Rprd2-201ENSMUST00000090791 7756 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col2a1P28481 Unc13b-215ENSMUST00000207569 14754 ntTSL 5 BASIC6.49□□□□□ -1.37
Col2a1P28481 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Col2a1P28481 Gm17477-201ENSMUST00000165458 2581 ntTSL 5 BASIC6.49□□□□□ -1.37
Col2a1P28481 Svil-201ENSMUST00000025079 7433 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col2a1P28481 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC6.49□□□□□ -1.37
Col2a1P28481 Add3-203ENSMUST00000111741 4520 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col2a1P28481 Fam35a-206ENSMUST00000228626 3100 ntBASIC6.49□□□□□ -1.37
Col2a1P28481 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Col2a1P28481 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 AC112972.2-201ENSMUST00000228702 2210 ntBASIC6.48□□□□□ -1.37
Col2a1P28481 Mir1188-201ENSMUST00000116756 120 ntBASIC6.48□□□□□ -1.37
Col2a1P28481 Gm15754-201ENSMUST00000119191 478 ntBASIC6.48□□□□□ -1.37
Col2a1P28481 Gm14267-201ENSMUST00000119751 496 ntBASIC6.48□□□□□ -1.37
Col2a1P28481 Gm11227-201ENSMUST00000119774 471 ntBASIC6.48□□□□□ -1.37
Col2a1P28481 Gm23211-201ENSMUST00000122717 308 ntBASIC6.48□□□□□ -1.37
Col2a1P28481 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC6.48□□□□□ -1.37
Col2a1P28481 Gm8032-201ENSMUST00000171009 574 ntBASIC6.48□□□□□ -1.37
Col2a1P28481 Gm7335-201ENSMUST00000172475 373 ntBASIC6.48□□□□□ -1.37
Col2a1P28481 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC6.48□□□□□ -1.37
Col2a1P28481 6330403N20Rik-201ENSMUST00000180467 1189 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 Gm26652-201ENSMUST00000180592 373 ntTSL 3 BASIC6.48□□□□□ -1.37
Col2a1P28481 Gm8321-201ENSMUST00000181691 980 ntBASIC6.48□□□□□ -1.37
Col2a1P28481 Mir6539-201ENSMUST00000183732 110 ntBASIC6.48□□□□□ -1.37
Col2a1P28481 Gm21842-202ENSMUST00000185311 174 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 Gm29285-201ENSMUST00000185500 174 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 Gm21801-202ENSMUST00000185537 174 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 Gm28312-201ENSMUST00000185976 174 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 Gm29213-201ENSMUST00000186199 174 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 Gm21428-201ENSMUST00000186550 174 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 Gm29370-201ENSMUST00000186581 174 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 Gm28604-201ENSMUST00000186629 484 ntBASIC6.48□□□□□ -1.37
Col2a1P28481 Gm21633-202ENSMUST00000186630 174 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 Gm28890-201ENSMUST00000186686 173 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 Gm28092-201ENSMUST00000186709 174 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 Gm28566-201ENSMUST00000186714 484 ntBASIC6.48□□□□□ -1.37
Col2a1P28481 Gm21572-202ENSMUST00000186850 174 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 Gm21916-202ENSMUST00000187044 174 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 Gm29839-201ENSMUST00000187045 174 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 Gm28442-201ENSMUST00000187052 174 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 Gm21780-202ENSMUST00000187110 174 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 Gm29656-201ENSMUST00000187236 174 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 Gm21821-202ENSMUST00000187288 175 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 Gm28886-201ENSMUST00000187350 174 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 Gm21599-202ENSMUST00000187381 174 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 Gm28128-201ENSMUST00000187403 174 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 Gm21450-201ENSMUST00000187408 174 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 Gm28194-201ENSMUST00000187412 484 ntBASIC6.48□□□□□ -1.37
Col2a1P28481 Gm28689-201ENSMUST00000187441 174 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 Gm28851-201ENSMUST00000187800 174 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 Gm28886-202ENSMUST00000187889 484 ntBASIC6.48□□□□□ -1.37
Col2a1P28481 Gm28554-201ENSMUST00000187964 174 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 Gm28984-201ENSMUST00000188202 174 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 Gm21529-202ENSMUST00000188473 174 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 Gm28604-202ENSMUST00000188638 174 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 Gm21588-202ENSMUST00000188721 174 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 Gm21539-202ENSMUST00000188764 174 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 Gm28216-201ENSMUST00000188785 174 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 Gm29645-201ENSMUST00000189117 174 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 Gm28554-202ENSMUST00000189175 484 ntBASIC6.48□□□□□ -1.37
Col2a1P28481 Gm21413-201ENSMUST00000189224 174 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 Gm21723-202ENSMUST00000189444 174 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 Gm36782-201ENSMUST00000189459 174 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 Gm21419-201ENSMUST00000189495 173 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 Gm28566-202ENSMUST00000189532 174 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 Gm29213-202ENSMUST00000189703 484 ntBASIC6.48□□□□□ -1.37
Col2a1P28481 Gm21626-202ENSMUST00000189751 174 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 Gm28851-202ENSMUST00000189757 484 ntBASIC6.48□□□□□ -1.37
Col2a1P28481 Gm28656-201ENSMUST00000190017 174 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 Gm28461-201ENSMUST00000190023 484 ntBASIC6.48□□□□□ -1.37
Col2a1P28481 Gm21562-202ENSMUST00000190314 174 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 Gm28517-201ENSMUST00000190343 174 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 Gm29531-201ENSMUST00000190569 174 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 Gm21914-202ENSMUST00000190577 174 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 Gm20978-201ENSMUST00000190688 174 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 Gm20963-201ENSMUST00000190880 174 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 Gm29316-201ENSMUST00000190953 174 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 Gm29351-201ENSMUST00000191052 174 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 Gm29466-201ENSMUST00000191077 174 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 Gm20987-201ENSMUST00000191165 174 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 Gm28194-202ENSMUST00000191217 174 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 Gm28461-202ENSMUST00000191406 174 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC6.48□□□□□ -1.37
Col2a1P28481 Gm37927-201ENSMUST00000192238 174 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 Gm37544-201ENSMUST00000192803 174 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col2a1P28481 Gm37635-201ENSMUST00000193129 174 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms