Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Cdx1P18111 Gm24069-201ENSMUST00000104512 127 ntBASIC4.82□□□□□ -1.64
Cdx1P18111 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Cdx1P18111 Slamf7-201ENSMUST00000111276 1082 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
Cdx1P18111 Gm11271-201ENSMUST00000116054 440 ntBASIC4.82□□□□□ -1.64
Cdx1P18111 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC4.82□□□□□ -1.64
Cdx1P18111 Gm14576-201ENSMUST00000118073 1111 ntBASIC4.82□□□□□ -1.64
Cdx1P18111 Gm14870-201ENSMUST00000118414 156 ntBASIC4.82□□□□□ -1.64
Cdx1P18111 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC4.82□□□□□ -1.64
Cdx1P18111 Gm12447-201ENSMUST00000119110 470 ntBASIC4.82□□□□□ -1.64
Cdx1P18111 Gm14580-201ENSMUST00000119122 718 ntBASIC4.82□□□□□ -1.64
Cdx1P18111 Gm12229-201ENSMUST00000120487 468 ntBASIC4.82□□□□□ -1.64
Cdx1P18111 Gm12438-201ENSMUST00000122034 336 ntBASIC4.82□□□□□ -1.64
Cdx1P18111 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Cdx1P18111 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC4.82□□□□□ -1.64
Cdx1P18111 Gm14216-201ENSMUST00000136046 409 ntTSL 3 BASIC4.82□□□□□ -1.64
Cdx1P18111 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC4.82□□□□□ -1.64
Cdx1P18111 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
Cdx1P18111 Gm9027-201ENSMUST00000165914 661 ntBASIC4.82□□□□□ -1.64
Cdx1P18111 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC4.82□□□□□ -1.64
Cdx1P18111 Gm26820-201ENSMUST00000180764 1008 ntTSL 5 BASIC4.82□□□□□ -1.64
Cdx1P18111 Gm27348-201ENSMUST00000184511 170 ntBASIC4.82□□□□□ -1.64
Cdx1P18111 Mir7072-201ENSMUST00000184542 60 ntBASIC4.82□□□□□ -1.64
Cdx1P18111 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
Cdx1P18111 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC4.82□□□□□ -1.64
Cdx1P18111 Gm28455-201ENSMUST00000189105 1290 ntBASIC4.82□□□□□ -1.64
Cdx1P18111 Gm28567-201ENSMUST00000190270 693 ntBASIC4.82□□□□□ -1.64
Cdx1P18111 Gm37044-201ENSMUST00000193531 693 ntBASIC4.82□□□□□ -1.64
Cdx1P18111 Gm18952-201ENSMUST00000194471 846 ntBASIC4.82□□□□□ -1.64
Cdx1P18111 Gm38369-201ENSMUST00000195101 693 ntBASIC4.82□□□□□ -1.64
Cdx1P18111 Gm42205-201ENSMUST00000199244 804 ntTSL 3 BASIC4.82□□□□□ -1.64
Cdx1P18111 Gm2602-201ENSMUST00000202112 571 ntBASIC4.82□□□□□ -1.64
Cdx1P18111 Gm43867-201ENSMUST00000203860 525 ntBASIC4.82□□□□□ -1.64
Cdx1P18111 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC4.82□□□□□ -1.64
Cdx1P18111 Gm44607-201ENSMUST00000205611 1090 ntBASIC4.82□□□□□ -1.64
Cdx1P18111 Gm2225-201ENSMUST00000209570 377 ntBASIC4.82□□□□□ -1.64
Cdx1P18111 Gm34263-202ENSMUST00000214353 303 ntTSL 5 BASIC4.82□□□□□ -1.64
Cdx1P18111 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC4.82□□□□□ -1.64
Cdx1P18111 Olfr1092-ps1-201ENSMUST00000216544 398 ntBASIC4.82□□□□□ -1.64
Cdx1P18111 Gm8137-201ENSMUST00000218997 463 ntBASIC4.82□□□□□ -1.64
Cdx1P18111 Prl2c2-203ENSMUST00000221612 596 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Cdx1P18111 Vmn1r41-205ENSMUST00000227630 827 ntBASIC4.82□□□□□ -1.64
Cdx1P18111 AC137902.1-201ENSMUST00000228184 102 ntBASIC4.82□□□□□ -1.64
Cdx1P18111 AC132833.4-201ENSMUST00000228313 203 ntBASIC4.82□□□□□ -1.64
Cdx1P18111 Ms4a2-201ENSMUST00000025583 1211 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Cdx1P18111 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC4.82□□□□□ -1.64
Cdx1P18111 Olfr687-201ENSMUST00000098154 938 ntBASIC4.82□□□□□ -1.64
Cdx1P18111 Olfr606-201ENSMUST00000098200 960 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Cdx1P18111 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC4.82□□□□□ -1.64
Cdx1P18111 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC4.82□□□□□ -1.64
Cdx1P18111 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Cdx1P18111 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Cdx1P18111 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Cdx1P18111 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Cdx1P18111 Gm43426-201ENSMUST00000197287 2597 ntBASIC4.82□□□□□ -1.64
Cdx1P18111 Dcun1d1-203ENSMUST00000178098 4434 ntTSL 5 BASIC4.82□□□□□ -1.64
Cdx1P18111 Olfr1310-202ENSMUST00000213559 4897 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Cdx1P18111 Gm35755-201ENSMUST00000222392 2077 ntBASIC4.82□□□□□ -1.64
Cdx1P18111 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Cdx1P18111 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Cdx1P18111 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Cdx1P18111 Olfr1471-205ENSMUST00000217482 1545 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Cdx1P18111 AC162908.1-201ENSMUST00000219164 4563 ntBASIC4.82□□□□□ -1.64
Cdx1P18111 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
Cdx1P18111 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
Cdx1P18111 Gm5594-201ENSMUST00000172712 1429 ntBASIC4.81□□□□□ -1.64
Cdx1P18111 Gm37755-201ENSMUST00000195880 2179 ntBASIC4.81□□□□□ -1.64
Cdx1P18111 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC4.81□□□□□ -1.64
Cdx1P18111 AW046200-203ENSMUST00000211787 2479 ntBASIC4.81□□□□□ -1.64
Cdx1P18111 Enox2-201ENSMUST00000033437 3170 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Cdx1P18111 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
Cdx1P18111 Gm24709-201ENSMUST00000104123 132 ntBASIC4.81□□□□□ -1.64
Cdx1P18111 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC4.81□□□□□ -1.64
Cdx1P18111 Gm7058-201ENSMUST00000119209 902 ntBASIC4.81□□□□□ -1.64
Cdx1P18111 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC4.81□□□□□ -1.64
Cdx1P18111 Gm15181-201ENSMUST00000120142 177 ntBASIC4.81□□□□□ -1.64
Cdx1P18111 Gm7113-201ENSMUST00000120477 958 ntBASIC4.81□□□□□ -1.64
Cdx1P18111 Gm14603-201ENSMUST00000121275 448 ntBASIC4.81□□□□□ -1.64
Cdx1P18111 Gm15502-201ENSMUST00000121449 208 ntBASIC4.81□□□□□ -1.64
Cdx1P18111 Gm11879-201ENSMUST00000121885 702 ntBASIC4.81□□□□□ -1.64
Cdx1P18111 Gm23426-201ENSMUST00000122483 318 ntBASIC4.81□□□□□ -1.64
Cdx1P18111 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Cdx1P18111 Gm24435-201ENSMUST00000157886 110 ntBASIC4.81□□□□□ -1.64
Cdx1P18111 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Cdx1P18111 Gm28514-201ENSMUST00000187488 450 ntTSL 2 BASIC4.81□□□□□ -1.64
Cdx1P18111 Gm18447-201ENSMUST00000187501 307 ntBASIC4.81□□□□□ -1.64
Cdx1P18111 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC4.81□□□□□ -1.64
Cdx1P18111 7530428D23Rik-201ENSMUST00000191725 765 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Cdx1P18111 Gm38326-201ENSMUST00000194030 686 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Cdx1P18111 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Cdx1P18111 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC4.81□□□□□ -1.64
Cdx1P18111 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
Cdx1P18111 Gm36378-201ENSMUST00000201709 388 ntBASIC4.81□□□□□ -1.64
Cdx1P18111 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC4.81□□□□□ -1.64
Cdx1P18111 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC4.81□□□□□ -1.64
Cdx1P18111 1600020E01Rik-208ENSMUST00000205028 329 ntTSL 5 BASIC4.81□□□□□ -1.64
Cdx1P18111 Gm45122-201ENSMUST00000206376 784 ntBASIC4.81□□□□□ -1.64
Cdx1P18111 Gm44993-201ENSMUST00000208435 842 ntTSL 3 BASIC4.81□□□□□ -1.64
Cdx1P18111 Gm2996-201ENSMUST00000211398 537 ntBASIC4.81□□□□□ -1.64
Cdx1P18111 Gm7769-201ENSMUST00000212900 933 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms