Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Olfr110-202ENSMUST00000216472 1721 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Chmp6P0C0A3 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Chmp6P0C0A3 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Chmp6P0C0A3 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
Chmp6P0C0A3 Olfr972-202ENSMUST00000215303 1641 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
Chmp6P0C0A3 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Chmp6P0C0A3 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Chmp6P0C0A3 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
Chmp6P0C0A3 Gm43328-201ENSMUST00000198544 1434 ntBASIC6.24□□□□□ -1.41
Chmp6P0C0A3 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Chmp6P0C0A3 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Chmp6P0C0A3 Muc15-201ENSMUST00000090332 1318 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Chmp6P0C0A3 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Chmp6P0C0A3 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Chmp6P0C0A3 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Chmp6P0C0A3 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
Chmp6P0C0A3 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Chmp6P0C0A3 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Chmp6P0C0A3 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Chmp6P0C0A3 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Chmp6P0C0A3 Lipk-203ENSMUST00000225505 2083 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Chmp6P0C0A3 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Chmp6P0C0A3 Pifo-201ENSMUST00000010280 956 ntAPPRIS P4 TSL 1 (best) BASIC6.23□□□□□ -1.41
Chmp6P0C0A3 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Chmp6P0C0A3 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
Chmp6P0C0A3 Gm14679-201ENSMUST00000121536 722 ntBASIC6.23□□□□□ -1.41
Chmp6P0C0A3 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC6.23□□□□□ -1.41
Chmp6P0C0A3 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC6.23□□□□□ -1.41
Chmp6P0C0A3 Gm23408-201ENSMUST00000158523 265 ntBASIC6.23□□□□□ -1.41
Chmp6P0C0A3 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
Chmp6P0C0A3 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC6.23□□□□□ -1.41
Chmp6P0C0A3 Gm24103-201ENSMUST00000174930 77 ntBASIC6.23□□□□□ -1.41
Chmp6P0C0A3 Mir5125-201ENSMUST00000175240 79 ntBASIC6.23□□□□□ -1.41
Chmp6P0C0A3 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC6.23□□□□□ -1.41
Chmp6P0C0A3 Gm8241-201ENSMUST00000189286 816 ntBASIC6.23□□□□□ -1.41
Chmp6P0C0A3 Gm37609-201ENSMUST00000191778 678 ntBASIC6.23□□□□□ -1.41
Chmp6P0C0A3 Gm7181-201ENSMUST00000202197 434 ntBASIC6.23□□□□□ -1.41
Chmp6P0C0A3 Gm44053-201ENSMUST00000203364 929 ntBASIC6.23□□□□□ -1.41
Chmp6P0C0A3 Gm8523-201ENSMUST00000211386 552 ntBASIC6.23□□□□□ -1.41
Chmp6P0C0A3 Gm40787-201ENSMUST00000218056 317 ntTSL 3 BASIC6.23□□□□□ -1.41
Chmp6P0C0A3 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Chmp6P0C0A3 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC6.23□□□□□ -1.41
Chmp6P0C0A3 CT485612.1-201ENSMUST00000222555 382 ntBASIC6.23□□□□□ -1.41
Chmp6P0C0A3 AC166369.2-201ENSMUST00000228403 308 ntBASIC6.23□□□□□ -1.41
Chmp6P0C0A3 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Chmp6P0C0A3 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Chmp6P0C0A3 Vaultrc5-201ENSMUST00000083211 143 ntBASIC6.23□□□□□ -1.41
Chmp6P0C0A3 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Chmp6P0C0A3 AC158981.2-201ENSMUST00000227565 1537 ntBASIC6.23□□□□□ -1.41
Chmp6P0C0A3 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Chmp6P0C0A3 Gm18066-201ENSMUST00000210904 1774 ntBASIC6.23□□□□□ -1.41
Chmp6P0C0A3 Ostn-201ENSMUST00000066852 1423 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Chmp6P0C0A3 Piga-202ENSMUST00000112255 3597 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Chmp6P0C0A3 Gm16751-201ENSMUST00000142212 1685 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Chmp6P0C0A3 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC6.23□□□□□ -1.41
Chmp6P0C0A3 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
Chmp6P0C0A3 Gm37127-201ENSMUST00000192924 3036 ntBASIC6.23□□□□□ -1.41
Chmp6P0C0A3 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Chmp6P0C0A3 Zfp644-201ENSMUST00000045466 5569 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Chmp6P0C0A3 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC6.22□□□□□ -1.41
Chmp6P0C0A3 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Chmp6P0C0A3 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
Chmp6P0C0A3 AC152944.1-201ENSMUST00000220160 3101 ntBASIC6.22□□□□□ -1.41
Chmp6P0C0A3 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC6.22□□□□□ -1.41
Chmp6P0C0A3 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Chmp6P0C0A3 Zfp607a-203ENSMUST00000205715 4031 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Chmp6P0C0A3 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Chmp6P0C0A3 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Chmp6P0C0A3 Gm43627-201ENSMUST00000197119 2299 ntBASIC6.22□□□□□ -1.41
Chmp6P0C0A3 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Chmp6P0C0A3 Gm37101-201ENSMUST00000191656 3660 ntBASIC6.22□□□□□ -1.41
Chmp6P0C0A3 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Chmp6P0C0A3 Gm22867-201ENSMUST00000157499 109 ntBASIC6.22□□□□□ -1.41
Chmp6P0C0A3 Mir1945-201ENSMUST00000157919 78 ntBASIC6.22□□□□□ -1.41
Chmp6P0C0A3 Gm3715-201ENSMUST00000172308 617 ntBASIC6.22□□□□□ -1.41
Chmp6P0C0A3 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC6.22□□□□□ -1.41
Chmp6P0C0A3 Gm6472-201ENSMUST00000178147 651 ntBASIC6.22□□□□□ -1.41
Chmp6P0C0A3 Gm24957-201ENSMUST00000179604 132 ntBASIC6.22□□□□□ -1.41
Chmp6P0C0A3 AV026068-209ENSMUST00000189143 517 ntTSL 3 BASIC6.22□□□□□ -1.41
Chmp6P0C0A3 Gm19124-201ENSMUST00000191041 832 ntBASIC6.22□□□□□ -1.41
Chmp6P0C0A3 Gm37581-201ENSMUST00000192371 988 ntBASIC6.22□□□□□ -1.41
Chmp6P0C0A3 Gm42776-201ENSMUST00000198031 406 ntBASIC6.22□□□□□ -1.41
Chmp6P0C0A3 Gm29736-201ENSMUST00000198189 385 ntBASIC6.22□□□□□ -1.41
Chmp6P0C0A3 Oaz3-204ENSMUST00000199678 935 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Chmp6P0C0A3 Gm6702-201ENSMUST00000208496 471 ntBASIC6.22□□□□□ -1.41
Chmp6P0C0A3 AC159886.1-201ENSMUST00000217099 1091 ntBASIC6.22□□□□□ -1.41
Chmp6P0C0A3 Gm34165-201ENSMUST00000222012 1174 ntBASIC6.22□□□□□ -1.41
Chmp6P0C0A3 AC161252.2-201ENSMUST00000224978 374 ntBASIC6.22□□□□□ -1.41
Chmp6P0C0A3 Gm5830-201ENSMUST00000049117 443 ntBASIC6.22□□□□□ -1.41
Chmp6P0C0A3 2700062C07Rik-201ENSMUST00000097646 1040 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Chmp6P0C0A3 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC6.22□□□□□ -1.41
Chmp6P0C0A3 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC6.22□□□□□ -1.41
Chmp6P0C0A3 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Chmp6P0C0A3 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
Chmp6P0C0A3 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Chmp6P0C0A3 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Chmp6P0C0A3 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC6.22□□□□□ -1.41
Chmp6P0C0A3 Gm9930-201ENSMUST00000066742 3151 ntBASIC6.22□□□□□ -1.41
Chmp6P0C0A3 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Chmp6P0C0A3 AL591843.1-201ENSMUST00000223686 3082 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms