Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Prpf40a-201ENSMUST00000076313 7374 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 Gm16794-201ENSMUST00000180727 2100 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 Dhx35-201ENSMUST00000029186 3212 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 Mrps5-201ENSMUST00000028852 4481 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 B230118H07Rik-203ENSMUST00000111231 2273 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 Gm38947-201ENSMUST00000209940 2720 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 Atp2b2-202ENSMUST00000101044 4586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 Vwa3b-203ENSMUST00000117172 1636 ntAPPRIS P5 TSL 2 BASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 Olfr297-202ENSMUST00000172965 1928 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 Htr4-201ENSMUST00000027560 4657 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 Cecr2-201ENSMUST00000100993 4849 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 Zfp827-202ENSMUST00000098614 7581 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 Zscan22-202ENSMUST00000117189 2995 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 Fut10-204ENSMUST00000161788 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 Gm24472-201ENSMUST00000104484 132 ntBASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 Krtap9-5-201ENSMUST00000105052 1077 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 Gm12385-201ENSMUST00000117439 795 ntBASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 Gm11922-201ENSMUST00000118967 475 ntBASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 Gm13767-201ENSMUST00000124074 876 ntBASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 Mir1968-201ENSMUST00000157429 68 ntBASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 Gm23209-201ENSMUST00000158667 110 ntBASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 Gm25975-201ENSMUST00000158702 125 ntBASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 Scarletltr-201ENSMUST00000176950 305 ntTSL 5 BASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 Gm26269-201ENSMUST00000180144 126 ntBASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 2610020C07Rik-201ENSMUST00000181526 2925 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 Gm4557-201ENSMUST00000185826 907 ntBASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 Gm29355-201ENSMUST00000188178 697 ntBASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 Gm28953-201ENSMUST00000188336 697 ntBASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 Gm8708-201ENSMUST00000188500 906 ntBASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 Gm43797-201ENSMUST00000198221 532 ntBASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 Ambn-202ENSMUST00000198265 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 Gm44307-201ENSMUST00000204466 764 ntBASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 Oaz3-207ENSMUST00000204913 689 ntTSL 5 BASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 Gm29754-201ENSMUST00000206269 358 ntBASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 Mpo-201ENSMUST00000020779 2750 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 Gm10043-201ENSMUST00000210691 235 ntBASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 AC148328.2-201ENSMUST00000216960 262 ntBASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 4930579P08Rik-201ENSMUST00000218193 1227 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 Gm5791-201ENSMUST00000220840 489 ntBASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 Plscr2-201ENSMUST00000034932 1874 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 Spag11a-201ENSMUST00000058955 436 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 Gm20900-201ENSMUST00000078729 472 ntBASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 Gm26668-201ENSMUST00000181125 3635 ntTSL 5 BASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 Casq2-201ENSMUST00000029454 2556 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 Adamdec1-201ENSMUST00000022641 2442 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 Wdr76-203ENSMUST00000110602 4170 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 Olfr1214-203ENSMUST00000217469 1955 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 Zfyve16-201ENSMUST00000022217 6150 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 Dnase1l1-202ENSMUST00000075821 1511 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 Lepr-201ENSMUST00000037552 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 Znfx1-202ENSMUST00000067584 4147 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 Adgrl3-208ENSMUST00000118442 5101 ntTSL 5 BASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 Efr3a-213ENSMUST00000211878 2541 ntTSL 5 BASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 Pla2g4c-203ENSMUST00000108528 3390 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 Eif3c-201ENSMUST00000032992 3383 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 Hmgcll1-205ENSMUST00000183425 3239 ntTSL 5 BASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 Dapp1-201ENSMUST00000029806 3083 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 Zfp541-203ENSMUST00000210805 4084 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 Fes-201ENSMUST00000080932 2762 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 Plxna4-201ENSMUST00000115096 12877 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 Nnt-202ENSMUST00000099149 3464 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx1-1G3UXB3 Trappc9-201ENSMUST00000023276 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nkx1-1G3UXB3 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nkx1-1G3UXB3 Adam17-201ENSMUST00000064536 4443 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nkx1-1G3UXB3 Gpr85-202ENSMUST00000115491 2165 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Nkx1-1G3UXB3 Gm14372-201ENSMUST00000125355 2193 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Nkx1-1G3UXB3 Oat-201ENSMUST00000084500 2152 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nkx1-1G3UXB3 Prdm14-201ENSMUST00000047577 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nkx1-1G3UXB3 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nkx1-1G3UXB3 Wdr93-201ENSMUST00000035622 2285 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nkx1-1G3UXB3 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Nkx1-1G3UXB3 Ifih1-202ENSMUST00000112459 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nkx1-1G3UXB3 Ubxn2b-201ENSMUST00000029907 6642 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nkx1-1G3UXB3 Sh2d7-201ENSMUST00000060242 2759 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nkx1-1G3UXB3 Rffl-204ENSMUST00000093975 3575 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Nkx1-1G3UXB3 Gm10804-201ENSMUST00000099693 2244 ntTSL 2 BASIC9.34□□□□□ -0.91
Nkx1-1G3UXB3 Sdr42e1-202ENSMUST00000173522 2615 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nkx1-1G3UXB3 Gm23691-201ENSMUST00000101878 107 ntBASIC9.34□□□□□ -0.91
Nkx1-1G3UXB3 Vegfa-203ENSMUST00000113519 513 ntTSL 5 BASIC9.34□□□□□ -0.91
Nkx1-1G3UXB3 Gm5757-201ENSMUST00000117494 528 ntBASIC9.34□□□□□ -0.91
Nkx1-1G3UXB3 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC9.34□□□□□ -0.91
Nkx1-1G3UXB3 Gm11881-201ENSMUST00000119408 572 ntBASIC9.34□□□□□ -0.91
Nkx1-1G3UXB3 Gm6829-201ENSMUST00000119858 360 ntBASIC9.34□□□□□ -0.91
Nkx1-1G3UXB3 Gm15112-201ENSMUST00000120152 860 ntBASIC9.34□□□□□ -0.91
Nkx1-1G3UXB3 Gm11107-201ENSMUST00000165414 505 ntBASIC9.34□□□□□ -0.91
Nkx1-1G3UXB3 Olfr92-201ENSMUST00000168659 939 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Nkx1-1G3UXB3 Gm24465-201ENSMUST00000178398 107 ntBASIC9.34□□□□□ -0.91
Nkx1-1G3UXB3 Gm28289-201ENSMUST00000189331 315 ntTSL 5 BASIC9.34□□□□□ -0.91
Nkx1-1G3UXB3 Gm3321-201ENSMUST00000200603 1129 ntBASIC9.34□□□□□ -0.91
Nkx1-1G3UXB3 Gm44076-201ENSMUST00000203072 520 ntBASIC9.34□□□□□ -0.91
Nkx1-1G3UXB3 Gm7351-201ENSMUST00000210745 580 ntBASIC9.34□□□□□ -0.91
Nkx1-1G3UXB3 Gm8106-201ENSMUST00000213123 523 ntBASIC9.34□□□□□ -0.91
Nkx1-1G3UXB3 AC125374.2-201ENSMUST00000214278 162 ntBASIC9.34□□□□□ -0.91
Nkx1-1G3UXB3 AC113204.1-203ENSMUST00000219475 375 ntTSL 3 BASIC9.34□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms